RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 CTTNBP2Q8WZ74 1663 aa23.79■■□□□ 1.4
NPLOC4-209ENST00000572760 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
NPLOC4-209ENST00000572760 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
NPLOC4-209ENST00000572760 IQGAP2Q13576 1575 aa23.72■■□□□ 1.39
NPLOC4-209ENST00000572760 UBTFP17480 764 aaKnown RBP23.71■■□□□ 1.39
NPLOC4-209ENST00000572760 JPH4Q96JJ6 628 aa23.71■■□□□ 1.39
NPLOC4-209ENST00000572760 SHROOM2Q13796 1616 aa23.68■■□□□ 1.38
NPLOC4-209ENST00000572760 ARHGEF11O15085 1522 aa23.64■■□□□ 1.38
NPLOC4-209ENST00000572760 RIMBP3CA6NJZ7 1639 aa23.64■■□□□ 1.38
NPLOC4-209ENST00000572760 RIMBP3BA6NNM3 1639 aa23.64■■□□□ 1.38
NPLOC4-209ENST00000572760 RIMBP3Q9UFD9 1639 aa23.64■■□□□ 1.38
NPLOC4-209ENST00000572760 PRG4Q92954 1404 aaPredicted RBP23.62■■□□□ 1.37
NPLOC4-209ENST00000572760 RANGAP1P46060 587 aaPredicted RBP23.57■■□□□ 1.36
NPLOC4-209ENST00000572760 UGGT2Q9NYU1 1516 aa23.56■■□□□ 1.36
NPLOC4-209ENST00000572760 CARMIL2Q6F5E8 1435 aa23.56■■□□□ 1.36
NPLOC4-209ENST00000572760 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
NPLOC4-209ENST00000572760 LOC105371045A0A1W2PR82 267 aa23.5■■□□□ 1.35
NPLOC4-209ENST00000572760 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
NPLOC4-209ENST00000572760 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
NPLOC4-209ENST00000572760 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
NPLOC4-209ENST00000572760 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
NPLOC4-209ENST00000572760 ARAP1Q96P48 1450 aa23.47■■□□□ 1.35
NPLOC4-209ENST00000572760 DISP1Q96F81 1524 aa23.47■■□□□ 1.35
NPLOC4-209ENST00000572760 P3H3Q8IVL6 736 aa23.43■■□□□ 1.34
NPLOC4-209ENST00000572760 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
NPLOC4-209ENST00000572760 PTPRGP23470 1445 aa23.4■■□□□ 1.34
NPLOC4-209ENST00000572760 EFCAB5A4FU69 1503 aa23.39■■□□□ 1.34
NPLOC4-209ENST00000572760 CLIP1P30622 1438 aa23.32■■□□□ 1.32
NPLOC4-209ENST00000572760 FHOD3Q2V2M9 1422 aa23.31■■□□□ 1.32
NPLOC4-209ENST00000572760 ARHGAP35Q9NRY4 1499 aa23.3■■□□□ 1.32
NPLOC4-209ENST00000572760 CEP162Q5TB80 1403 aa23.27■■□□□ 1.32
NPLOC4-209ENST00000572760 UACAQ9BZF9 1416 aa23.24■■□□□ 1.31
NPLOC4-209ENST00000572760 ADCY10Q96PN6 1610 aa23.2■■□□□ 1.3
NPLOC4-209ENST00000572760 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
NPLOC4-209ENST00000572760 PLB1Q6P1J6 1458 aa23.19■■□□□ 1.3
NPLOC4-209ENST00000572760 ABCC2Q92887 1545 aa23.18■■□□□ 1.3
NPLOC4-209ENST00000572760 FMN1Q68DA7 1419 aa23.18■■□□□ 1.3
NPLOC4-209ENST00000572760 ABCA8O94911 1581 aa23.18■■□□□ 1.3
NPLOC4-209ENST00000572760 RAPGEF6Q8TEU7 1601 aa23.17■■□□□ 1.3
NPLOC4-209ENST00000572760 UHRF1BP1LA0JNW5 1464 aa23.16■■□□□ 1.3
NPLOC4-209ENST00000572760 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-209ENST00000572760 ARID3CA6NKF2 412 aa23.08■■□□□ 1.29
NPLOC4-209ENST00000572760 ZCCHC11Q5TAX3 1644 aaKnown RBP23.07■■□□□ 1.28
NPLOC4-209ENST00000572760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.06■■□□□ 1.28
NPLOC4-209ENST00000572760 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
NPLOC4-209ENST00000572760 HECW1Q76N89 1606 aa23.06■■□□□ 1.28
NPLOC4-209ENST00000572760 KDM5BQ9UGL1 1544 aa23.05■■□□□ 1.28
NPLOC4-209ENST00000572760 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
NPLOC4-209ENST00000572760 NUP153P49790 1475 aaKnown RBP23.02■■□□□ 1.28
NPLOC4-209ENST00000572760 CASKIN1Q8WXD9 1431 aa23.01■■□□□ 1.27
NPLOC4-209ENST00000572760 ATP10BO94823 1461 aa22.98■■□□□ 1.27
NPLOC4-209ENST00000572760 FYCO1Q9BQS8 1478 aa22.98■■□□□ 1.27
NPLOC4-209ENST00000572760 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
NPLOC4-209ENST00000572760 VPS8Q8N3P4 1428 aa22.97■■□□□ 1.27
NPLOC4-209ENST00000572760 LRRIQ1Q96JM4 1722 aa22.95■■□□□ 1.26
NPLOC4-209ENST00000572760 EPRSP07814 1512 aaKnown RBP22.94■■□□□ 1.26
NPLOC4-209ENST00000572760 ASXL2Q76L83 1435 aa22.94■■□□□ 1.26
NPLOC4-209ENST00000572760 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
NPLOC4-209ENST00000572760 CDK13Q14004 1512 aaKnown RBP22.93■■□□□ 1.26
NPLOC4-209ENST00000572760 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
NPLOC4-209ENST00000572760 PLEKHD1A6NEE1 506 aa22.9■■□□□ 1.26
NPLOC4-209ENST00000572760 CDK11AQ9UQ88 783 aaPredicted RBP22.9■■□□□ 1.26
NPLOC4-209ENST00000572760 WDR7Q9Y4E6 1490 aa22.88■■□□□ 1.25
NPLOC4-209ENST00000572760 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
NPLOC4-209ENST00000572760 KIF13AQ9H1H9 1805 aa22.85■■□□□ 1.25
NPLOC4-209ENST00000572760 APLP2Q06481 763 aa22.85■■□□□ 1.25
NPLOC4-209ENST00000572760 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.25
NPLOC4-209ENST00000572760 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
NPLOC4-209ENST00000572760 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
NPLOC4-209ENST00000572760 CFAP43Q8NDM7 1665 aa22.78■■□□□ 1.24
NPLOC4-209ENST00000572760 TSPOAP1O95153 1857 aa22.77■■□□□ 1.24
NPLOC4-209ENST00000572760 GLI2P10070 1586 aa22.76■■□□□ 1.23
NPLOC4-209ENST00000572760 TIAM1Q13009 1591 aa22.76■■□□□ 1.23
NPLOC4-209ENST00000572760 TROQ12816 1431 aaPredicted RBP22.75■■□□□ 1.23
NPLOC4-209ENST00000572760 MTUS2Q5JR59 1369 aa22.75■■□□□ 1.23
NPLOC4-209ENST00000572760 KIF14Q15058 1648 aa22.71■■□□□ 1.23
NPLOC4-209ENST00000572760 MAP3K1Q13233 1512 aa22.71■■□□□ 1.23
NPLOC4-209ENST00000572760 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
NPLOC4-209ENST00000572760 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
NPLOC4-209ENST00000572760 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
NPLOC4-209ENST00000572760 MAP3K4Q9Y6R4 1608 aa22.68■■□□□ 1.22
NPLOC4-209ENST00000572760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
NPLOC4-209ENST00000572760 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
NPLOC4-209ENST00000572760 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.21
NPLOC4-209ENST00000572760 TTC37Q6PGP7 1564 aa22.63■■□□□ 1.21
NPLOC4-209ENST00000572760 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
NPLOC4-209ENST00000572760 MYO5CQ9NQX4 1742 aa22.62■■□□□ 1.21
NPLOC4-209ENST00000572760 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
NPLOC4-209ENST00000572760 PPRC1Q5VV67 1664 aaKnown RBP22.58■■□□□ 1.21
NPLOC4-209ENST00000572760 TEX14Q8IWB6 1497 aa22.58■■□□□ 1.2
NPLOC4-209ENST00000572760 CDC42BPAQ5VT25 1732 aa22.55■■□□□ 1.2
NPLOC4-209ENST00000572760 CCNB3Q8WWL7 1395 aa22.54■■□□□ 1.2
NPLOC4-209ENST00000572760 NCOA2Q15596 1464 aa22.54■■□□□ 1.2
NPLOC4-209ENST00000572760 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
NPLOC4-209ENST00000572760 PLCH2O75038 1416 aa22.52■■□□□ 1.2
NPLOC4-209ENST00000572760 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
NPLOC4-209ENST00000572760 PREX2Q70Z35 1606 aa22.51■■□□□ 1.19
NPLOC4-209ENST00000572760 ARHGAP5Q13017 1502 aa22.51■■□□□ 1.19
NPLOC4-209ENST00000572760 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
NPLOC4-209ENST00000572760 PPARGC1BQ86YN6 1023 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms