RNA–Protein interactions for RNA: ENST00000572152.5

ABR-216, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-216ENST00000572152 TRHP20396 242 aaPredicted RBP17.15■□□□□ 0.34
ABR-216ENST00000572152 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
ABR-216ENST00000572152 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
ABR-216ENST00000572152 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
ABR-216ENST00000572152 AEBP2Q6ZN18 517 aaPredicted RBP17.09■□□□□ 0.33
ABR-216ENST00000572152 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
ABR-216ENST00000572152 IQGAP2Q13576 1575 aa16.96■□□□□ 0.31
ABR-216ENST00000572152 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
ABR-216ENST00000572152 PTPRGP23470 1445 aa16.92■□□□□ 0.3
ABR-216ENST00000572152 TNIKQ9UKE5 1360 aa16.9■□□□□ 0.3
ABR-216ENST00000572152 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
ABR-216ENST00000572152 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
ABR-216ENST00000572152 TTBK1Q5TCY1 1321 aaPredicted RBP16.89■□□□□ 0.29
ABR-216ENST00000572152 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
ABR-216ENST00000572152 DISP1Q96F81 1524 aa16.87■□□□□ 0.29
ABR-216ENST00000572152 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
ABR-216ENST00000572152 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
ABR-216ENST00000572152 MAPKBP1O60336 1514 aa16.83■□□□□ 0.28
ABR-216ENST00000572152 ABCC10Q5T3U5 1492 aa16.8■□□□□ 0.28
ABR-216ENST00000572152 CTTNBP2Q8WZ74 1663 aa16.8■□□□□ 0.28
ABR-216ENST00000572152 KIAA0556O60303 1618 aa16.79■□□□□ 0.28
ABR-216ENST00000572152 FAM69CQ0P6D2 419 aa16.79■□□□□ 0.28
ABR-216ENST00000572152 EEA1Q15075 1411 aa16.79■□□□□ 0.28
ABR-216ENST00000572152 UACAQ9BZF9 1416 aa16.79■□□□□ 0.28
ABR-216ENST00000572152 KIF13AQ9H1H9 1805 aa16.78■□□□□ 0.28
ABR-216ENST00000572152 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
ABR-216ENST00000572152 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
ABR-216ENST00000572152 GOLGA3Q08378 1498 aa16.75■□□□□ 0.27
ABR-216ENST00000572152 DIP2BQ9P265 1576 aa16.75■□□□□ 0.27
ABR-216ENST00000572152 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
ABR-216ENST00000572152 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
ABR-216ENST00000572152 ASXL2Q76L83 1435 aa16.7■□□□□ 0.26
ABR-216ENST00000572152 KDM5BQ9UGL1 1544 aa16.7■□□□□ 0.26
ABR-216ENST00000572152 PLB1Q6P1J6 1458 aa16.69■□□□□ 0.26
ABR-216ENST00000572152 P3H3Q8IVL6 736 aa16.65■□□□□ 0.26
ABR-216ENST00000572152 ABCA8O94911 1581 aa16.64■□□□□ 0.25
ABR-216ENST00000572152 ZCCHC11Q5TAX3 1644 aaKnown RBP16.63■□□□□ 0.25
ABR-216ENST00000572152 GLI2P10070 1586 aa16.61■□□□□ 0.25
ABR-216ENST00000572152 KIF21BO75037 1637 aa16.61■□□□□ 0.25
ABR-216ENST00000572152 ILDR1Q86SU0 546 aaPredicted RBP16.61■□□□□ 0.25
ABR-216ENST00000572152 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
ABR-216ENST00000572152 SAMD9Q5K651 1589 aa16.6■□□□□ 0.25
ABR-216ENST00000572152 RANGAP1P46060 587 aaPredicted RBP16.59■□□□□ 0.25
ABR-216ENST00000572152 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
ABR-216ENST00000572152 TSPOAP1O95153 1857 aa16.58■□□□□ 0.24
ABR-216ENST00000572152 EHMT2Q96KQ7 1210 aa16.54■□□□□ 0.24
ABR-216ENST00000572152 KDM6BO15054 1643 aa16.54■□□□□ 0.24
ABR-216ENST00000572152 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
ABR-216ENST00000572152 FHOD3Q2V2M9 1422 aa16.53■□□□□ 0.24
ABR-216ENST00000572152 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
ABR-216ENST00000572152 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
ABR-216ENST00000572152 ATP10BO94823 1461 aa16.52■□□□□ 0.23
ABR-216ENST00000572152 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
ABR-216ENST00000572152 MAP3K4Q9Y6R4 1608 aa16.51■□□□□ 0.23
ABR-216ENST00000572152 RAPGEF6Q8TEU7 1601 aa16.49■□□□□ 0.23
ABR-216ENST00000572152 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
ABR-216ENST00000572152 TEX14Q8IWB6 1497 aa16.48■□□□□ 0.23
ABR-216ENST00000572152 CD109Q6YHK3 1445 aa16.46■□□□□ 0.23
ABR-216ENST00000572152 NUP153P49790 1475 aaKnown RBP16.46■□□□□ 0.23
ABR-216ENST00000572152 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.44■□□□□ 0.22
ABR-216ENST00000572152 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
ABR-216ENST00000572152 COL17A1Q9UMD9 1497 aaPredicted RBP16.43■□□□□ 0.22
ABR-216ENST00000572152 MAGI3Q5TCQ9 1506 aa16.43■□□□□ 0.22
ABR-216ENST00000572152 CFAP43Q8NDM7 1665 aa16.42■□□□□ 0.22
ABR-216ENST00000572152 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
ABR-216ENST00000572152 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
ABR-216ENST00000572152 ABCA9Q8IUA7 1624 aa16.36■□□□□ 0.21
ABR-216ENST00000572152 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
ABR-216ENST00000572152 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
ABR-216ENST00000572152 CDK13Q14004 1512 aaKnown RBP16.31■□□□□ 0.2
ABR-216ENST00000572152 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
ABR-216ENST00000572152 PHLDB1Q86UU1 1377 aa16.3■□□□□ 0.2
ABR-216ENST00000572152 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
ABR-216ENST00000572152 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
ABR-216ENST00000572152 NEO1Q92859 1461 aa16.27■□□□□ 0.19
ABR-216ENST00000572152 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.25■□□□□ 0.19
ABR-216ENST00000572152 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
ABR-216ENST00000572152 CLIP1P30622 1438 aa16.22■□□□□ 0.19
ABR-216ENST00000572152 RAPGEF3O95398 923 aa16.22■□□□□ 0.19
ABR-216ENST00000572152 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
ABR-216ENST00000572152 TTC37Q6PGP7 1564 aa16.21■□□□□ 0.19
ABR-216ENST00000572152 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
ABR-216ENST00000572152 FANCAO15360 1455 aa16.2■□□□□ 0.18
ABR-216ENST00000572152 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
ABR-216ENST00000572152 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
ABR-216ENST00000572152 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
ABR-216ENST00000572152 PLCH2O75038 1416 aa16.17■□□□□ 0.18
ABR-216ENST00000572152 CFAP74Q9C0B2 1584 aa16.16■□□□□ 0.18
ABR-216ENST00000572152 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
ABR-216ENST00000572152 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
ABR-216ENST00000572152 FRMPD1Q5SYB0 1578 aa16.15■□□□□ 0.18
ABR-216ENST00000572152 LRRIQ1Q96JM4 1722 aa16.15■□□□□ 0.18
ABR-216ENST00000572152 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
ABR-216ENST00000572152 KIF14Q15058 1648 aa16.14■□□□□ 0.17
ABR-216ENST00000572152 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
ABR-216ENST00000572152 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
ABR-216ENST00000572152 RICTORQ6R327 1708 aa16.09■□□□□ 0.17
ABR-216ENST00000572152 MYO5CQ9NQX4 1742 aa16.09■□□□□ 0.17
ABR-216ENST00000572152 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
ABR-216ENST00000572152 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 961.7 ms