RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
ABR-208ENST00000570688 SHROOM2Q13796 1616 aa18.75■□□□□ 0.59
ABR-208ENST00000570688 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
ABR-208ENST00000570688 EEA1Q15075 1411 aa18.74■□□□□ 0.59
ABR-208ENST00000570688 KIAA0586Q9BVV6 1533 aa18.69■□□□□ 0.58
ABR-208ENST00000570688 ARAP1Q96P48 1450 aa18.66■□□□□ 0.58
ABR-208ENST00000570688 KIF21BO75037 1637 aa18.64■□□□□ 0.57
ABR-208ENST00000570688 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
ABR-208ENST00000570688 CTTNBP2Q8WZ74 1663 aa18.62■□□□□ 0.57
ABR-208ENST00000570688 IQGAP2Q13576 1575 aa18.61■□□□□ 0.57
ABR-208ENST00000570688 PRG4Q92954 1404 aaPredicted RBP18.6■□□□□ 0.57
ABR-208ENST00000570688 DISP1Q96F81 1524 aa18.55■□□□□ 0.56
ABR-208ENST00000570688 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
ABR-208ENST00000570688 EHMT2Q96KQ7 1210 aa18.53■□□□□ 0.56
ABR-208ENST00000570688 CYB5RLQ6IPT4 315 aa18.5■□□□□ 0.55
ABR-208ENST00000570688 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
ABR-208ENST00000570688 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
ABR-208ENST00000570688 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
ABR-208ENST00000570688 TNIKQ9UKE5 1360 aa18.39■□□□□ 0.53
ABR-208ENST00000570688 CARMIL2Q6F5E8 1435 aa18.38■□□□□ 0.53
ABR-208ENST00000570688 ADCY10Q96PN6 1610 aa18.37■□□□□ 0.53
ABR-208ENST00000570688 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
ABR-208ENST00000570688 PTPRGP23470 1445 aa18.35■□□□□ 0.53
ABR-208ENST00000570688 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
ABR-208ENST00000570688 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
ABR-208ENST00000570688 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
ABR-208ENST00000570688 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.53
ABR-208ENST00000570688 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
ABR-208ENST00000570688 FHOD3Q2V2M9 1422 aa18.32■□□□□ 0.52
ABR-208ENST00000570688 PLB1Q6P1J6 1458 aa18.3■□□□□ 0.52
ABR-208ENST00000570688 ABCA8O94911 1581 aa18.29■□□□□ 0.52
ABR-208ENST00000570688 EFCAB5A4FU69 1503 aa18.27■□□□□ 0.51
ABR-208ENST00000570688 UHRF1BP1LA0JNW5 1464 aa18.26■□□□□ 0.51
ABR-208ENST00000570688 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
ABR-208ENST00000570688 ABCC2Q92887 1545 aa18.25■□□□□ 0.51
ABR-208ENST00000570688 KDM5BQ9UGL1 1544 aa18.19■□□□□ 0.5
ABR-208ENST00000570688 CLIP1P30622 1438 aa18.18■□□□□ 0.5
ABR-208ENST00000570688 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
ABR-208ENST00000570688 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
ABR-208ENST00000570688 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
ABR-208ENST00000570688 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
ABR-208ENST00000570688 MAPKBP1O60336 1514 aa18.14■□□□□ 0.49
ABR-208ENST00000570688 ATP10BO94823 1461 aa18.13■□□□□ 0.49
ABR-208ENST00000570688 LRRIQ1Q96JM4 1722 aa18.12■□□□□ 0.49
ABR-208ENST00000570688 KIF13AQ9H1H9 1805 aa18.12■□□□□ 0.49
ABR-208ENST00000570688 ARID3CA6NKF2 412 aa18.1■□□□□ 0.49
ABR-208ENST00000570688 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.49
ABR-208ENST00000570688 ASXL2Q76L83 1435 aa18.08■□□□□ 0.49
ABR-208ENST00000570688 DIP2BQ9P265 1576 aa18.07■□□□□ 0.48
ABR-208ENST00000570688 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
ABR-208ENST00000570688 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
ABR-208ENST00000570688 ABCC10Q5T3U5 1492 aa18.05■□□□□ 0.48
ABR-208ENST00000570688 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
ABR-208ENST00000570688 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
ABR-208ENST00000570688 EPRSP07814 1512 aaKnown RBP18.01■□□□□ 0.47
ABR-208ENST00000570688 HECW1Q76N89 1606 aa18.01■□□□□ 0.47
ABR-208ENST00000570688 WDR7Q9Y4E6 1490 aa18■□□□□ 0.47
ABR-208ENST00000570688 TRHP20396 242 aaPredicted RBP17.99■□□□□ 0.47
ABR-208ENST00000570688 GLI2P10070 1586 aa17.96■□□□□ 0.47
ABR-208ENST00000570688 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
ABR-208ENST00000570688 MAGI3Q5TCQ9 1506 aa17.96■□□□□ 0.47
ABR-208ENST00000570688 PPRC1Q5VV67 1664 aaKnown RBP17.96■□□□□ 0.47
ABR-208ENST00000570688 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
ABR-208ENST00000570688 MAP3K4Q9Y6R4 1608 aa17.92■□□□□ 0.46
ABR-208ENST00000570688 VPS8Q8N3P4 1428 aa17.91■□□□□ 0.46
ABR-208ENST00000570688 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
ABR-208ENST00000570688 TSPOAP1O95153 1857 aa17.9■□□□□ 0.46
ABR-208ENST00000570688 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
ABR-208ENST00000570688 KIF14Q15058 1648 aa17.87■□□□□ 0.45
ABR-208ENST00000570688 ABCA9Q8IUA7 1624 aa17.87■□□□□ 0.45
ABR-208ENST00000570688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
ABR-208ENST00000570688 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
ABR-208ENST00000570688 TTC37Q6PGP7 1564 aa17.86■□□□□ 0.45
ABR-208ENST00000570688 CCDC18Q5T9S5 1454 aa17.85■□□□□ 0.45
ABR-208ENST00000570688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.85■□□□□ 0.45
ABR-208ENST00000570688 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
ABR-208ENST00000570688 TROQ12816 1431 aaPredicted RBP17.83■□□□□ 0.45
ABR-208ENST00000570688 PLEKHD1A6NEE1 506 aa17.83■□□□□ 0.44
ABR-208ENST00000570688 TIAM1Q13009 1591 aa17.8■□□□□ 0.44
ABR-208ENST00000570688 COL17A1Q9UMD9 1497 aaPredicted RBP17.79■□□□□ 0.44
ABR-208ENST00000570688 CD109Q6YHK3 1445 aa17.79■□□□□ 0.44
ABR-208ENST00000570688 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
ABR-208ENST00000570688 MAP3K1Q13233 1512 aa17.72■□□□□ 0.43
ABR-208ENST00000570688 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
ABR-208ENST00000570688 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
ABR-208ENST00000570688 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
ABR-208ENST00000570688 CDC42BPAQ5VT25 1732 aa17.71■□□□□ 0.43
ABR-208ENST00000570688 LRRC9Q6ZRR7 1453 aa17.7■□□□□ 0.42
ABR-208ENST00000570688 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
ABR-208ENST00000570688 PLCH2O75038 1416 aa17.69■□□□□ 0.42
ABR-208ENST00000570688 MTUS2Q5JR59 1369 aa17.68■□□□□ 0.42
ABR-208ENST00000570688 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
ABR-208ENST00000570688 TEX14Q8IWB6 1497 aa17.67■□□□□ 0.42
ABR-208ENST00000570688 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
ABR-208ENST00000570688 KDM6BO15054 1643 aa17.66■□□□□ 0.42
ABR-208ENST00000570688 ARAP3Q8WWN8 1544 aa17.65■□□□□ 0.42
ABR-208ENST00000570688 FRMPD1Q5SYB0 1578 aa17.65■□□□□ 0.42
ABR-208ENST00000570688 FANCAO15360 1455 aa17.64■□□□□ 0.41
ABR-208ENST00000570688 NCOA2Q15596 1464 aa17.64■□□□□ 0.41
ABR-208ENST00000570688 NEO1Q92859 1461 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms