RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
RAB11A-209ENST00000569896 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
RAB11A-209ENST00000569896 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
RAB11A-209ENST00000569896 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
RAB11A-209ENST00000569896 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.19
RAB11A-209ENST00000569896 IFT140Q96RY7 1462 aa13.83□□□□□ -0.19
RAB11A-209ENST00000569896 SYNJ1O43426 1573 aa13.83□□□□□ -0.2
RAB11A-209ENST00000569896 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
RAB11A-209ENST00000569896 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
RAB11A-209ENST00000569896 SOGA1O94964 1423 aa13.81□□□□□ -0.2
RAB11A-209ENST00000569896 RAD54L2Q9Y4B4 1467 aa13.79□□□□□ -0.2
RAB11A-209ENST00000569896 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
RAB11A-209ENST00000569896 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
RAB11A-209ENST00000569896 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
RAB11A-209ENST00000569896 FBLN2P98095 1184 aa13.72□□□□□ -0.21
RAB11A-209ENST00000569896 AQRO60306 1485 aaKnown RBP eCLIP13.72□□□□□ -0.219e-9■■■■□ 19.4
RAB11A-209ENST00000569896 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.21
RAB11A-209ENST00000569896 ABCA10Q8WWZ4 1543 aa13.69□□□□□ -0.22
RAB11A-209ENST00000569896 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
RAB11A-209ENST00000569896 OSCARQ8IYS5 282 aa13.68□□□□□ -0.22
RAB11A-209ENST00000569896 TRIM41Q8WV44 630 aa13.67□□□□□ -0.22
RAB11A-209ENST00000569896 GAPVD1Q14C86 1478 aa13.65□□□□□ -0.22
RAB11A-209ENST00000569896 ABCA5Q8WWZ7 1642 aa13.65□□□□□ -0.22
RAB11A-209ENST00000569896 CHD1O14646 1710 aa13.62□□□□□ -0.23
RAB11A-209ENST00000569896 GRIN2BQ13224 1484 aa13.62□□□□□ -0.23
RAB11A-209ENST00000569896 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
RAB11A-209ENST00000569896 AKT1S1Q96B36 256 aa13.58□□□□□ -0.23
RAB11A-209ENST00000569896 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
RAB11A-209ENST00000569896 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
RAB11A-209ENST00000569896 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
RAB11A-209ENST00000569896 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
RAB11A-209ENST00000569896 MKRN4PQ13434 485 aaPredicted RBP13.54□□□□□ -0.24
RAB11A-209ENST00000569896 SYNJ2O15056 1496 aa13.51□□□□□ -0.25
RAB11A-209ENST00000569896 ADAMTS12P58397 1594 aa13.51□□□□□ -0.25
RAB11A-209ENST00000569896 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
RAB11A-209ENST00000569896 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
RAB11A-209ENST00000569896 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
RAB11A-209ENST00000569896 CUL7Q14999 1698 aa13.49□□□□□ -0.25
RAB11A-209ENST00000569896 RUSC2Q8N2Y8 1516 aa13.47□□□□□ -0.25
RAB11A-209ENST00000569896 FHAD1B1AJZ9 1412 aa13.47□□□□□ -0.25
RAB11A-209ENST00000569896 IGF1RP08069 1367 aa13.47□□□□□ -0.25
RAB11A-209ENST00000569896 POTEHQ6S545 545 aa13.46□□□□□ -0.25
RAB11A-209ENST00000569896 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
RAB11A-209ENST00000569896 CHRDL2Q6WN34 429 aa13.44□□□□□ -0.26
RAB11A-209ENST00000569896 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
RAB11A-209ENST00000569896 CARMIL1Q5VZK9 1371 aa13.41□□□□□ -0.26
RAB11A-209ENST00000569896 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
RAB11A-209ENST00000569896 ZNF692Q9BU19 519 aaPredicted RBP13.4□□□□□ -0.26
RAB11A-209ENST00000569896 CEP170Q5SW79 1584 aa13.38□□□□□ -0.27
RAB11A-209ENST00000569896 EEA1Q15075 1411 aa13.37□□□□□ -0.27
RAB11A-209ENST00000569896 CLASP1Q7Z460 1538 aa13.37□□□□□ -0.27
RAB11A-209ENST00000569896 RAPGEF2Q9Y4G8 1499 aa13.35□□□□□ -0.27
RAB11A-209ENST00000569896 NUP160Q12769 1436 aa13.34□□□□□ -0.27
RAB11A-209ENST00000569896 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
RAB11A-209ENST00000569896 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
RAB11A-209ENST00000569896 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
RAB11A-209ENST00000569896 CTTNBP2Q8WZ74 1663 aa13.31□□□□□ -0.28
RAB11A-209ENST00000569896 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
RAB11A-209ENST00000569896 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
RAB11A-209ENST00000569896 PRXQ9BXM0 1461 aa13.29□□□□□ -0.28
RAB11A-209ENST00000569896 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
RAB11A-209ENST00000569896 KIAA0586Q9BVV6 1533 aa13.28□□□□□ -0.28
RAB11A-209ENST00000569896 SHROOM2Q13796 1616 aa13.27□□□□□ -0.29
RAB11A-209ENST00000569896 JPH4Q96JJ6 628 aa13.26□□□□□ -0.29
RAB11A-209ENST00000569896 IQGAP2Q13576 1575 aa13.26□□□□□ -0.29
RAB11A-209ENST00000569896 KIF21BO75037 1637 aa13.25□□□□□ -0.29
RAB11A-209ENST00000569896 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
RAB11A-209ENST00000569896 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
RAB11A-209ENST00000569896 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
RAB11A-209ENST00000569896 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
RAB11A-209ENST00000569896 CLEC11AQ9Y240 323 aa13.2□□□□□ -0.3
RAB11A-209ENST00000569896 UBTFP17480 764 aaKnown RBP13.19□□□□□ -0.3
RAB11A-209ENST00000569896 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
RAB11A-209ENST00000569896 GOLGA3Q08378 1498 aa13.17□□□□□ -0.3
RAB11A-209ENST00000569896 CARMIL2Q6F5E8 1435 aa13.17□□□□□ -0.3
RAB11A-209ENST00000569896 TTBK1Q5TCY1 1321 aaPredicted RBP13.16□□□□□ -0.3
RAB11A-209ENST00000569896 RANGAP1P46060 587 aaPredicted RBP13.16□□□□□ -0.3
RAB11A-209ENST00000569896 PIP4P2Q8N4L2 257 aa13.15□□□□□ -0.3
RAB11A-209ENST00000569896 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
RAB11A-209ENST00000569896 SPDYE4A6NLX3 237 aa13.12□□□□□ -0.31
RAB11A-209ENST00000569896 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
RAB11A-209ENST00000569896 FXR2P51116 673 aaKnown RBP eCLIP13.1□□□□□ -0.31
RAB11A-209ENST00000569896 DISP1Q96F81 1524 aa13.1□□□□□ -0.31
RAB11A-209ENST00000569896 TNIKQ9UKE5 1360 aa13.09□□□□□ -0.31
RAB11A-209ENST00000569896 PTPRGP23470 1445 aa13.08□□□□□ -0.31
RAB11A-209ENST00000569896 P3H3Q8IVL6 736 aa13.08□□□□□ -0.31
RAB11A-209ENST00000569896 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
RAB11A-209ENST00000569896 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
RAB11A-209ENST00000569896 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
RAB11A-209ENST00000569896 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
RAB11A-209ENST00000569896 LOC105371045A0A1W2PR82 267 aa13.01□□□□□ -0.33
RAB11A-209ENST00000569896 PRR29P0C7W0 189 aa13.01□□□□□ -0.33
RAB11A-209ENST00000569896 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
RAB11A-209ENST00000569896 UACAQ9BZF9 1416 aa12.98□□□□□ -0.33
RAB11A-209ENST00000569896 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
RAB11A-209ENST00000569896 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
RAB11A-209ENST00000569896 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.33
RAB11A-209ENST00000569896 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
RAB11A-209ENST00000569896 RAPGEF6Q8TEU7 1601 aa12.95□□□□□ -0.34
RAB11A-209ENST00000569896 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms