RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 AEBP2Q6ZN18 517 aaPredicted RBP24.33■■□□□ 1.49
RAB11A-209ENST00000569896 CHIC1Q5VXU3 224 aa23.41■■□□□ 1.34
RAB11A-209ENST00000569896 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
RAB11A-209ENST00000569896 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
RAB11A-209ENST00000569896 FOXD1Q16676 465 aa19.31■□□□□ 0.68
RAB11A-209ENST00000569896 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
RAB11A-209ENST00000569896 PLPPR3Q6T4P5 718 aa18.88■□□□□ 0.61
RAB11A-209ENST00000569896 ADRA2BP18089 450 aa18.23■□□□□ 0.51
RAB11A-209ENST00000569896 PPP6R1Q9UPN7 881 aa18.23■□□□□ 0.51
RAB11A-209ENST00000569896 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
RAB11A-209ENST00000569896 MSH5O43196 834 aa18.03■□□□□ 0.48
RAB11A-209ENST00000569896 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.33
RAB11A-209ENST00000569896 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
RAB11A-209ENST00000569896 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
RAB11A-209ENST00000569896 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.26
RAB11A-209ENST00000569896 ABCC9O60706 1549 aa16.6■□□□□ 0.25
RAB11A-209ENST00000569896 PPP4R3CPQ6ZMV5 832 aa16.56■□□□□ 0.24
RAB11A-209ENST00000569896 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
RAB11A-209ENST00000569896 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
RAB11A-209ENST00000569896 DCAF8L2P0C7V8 631 aa16.13■□□□□ 0.17
RAB11A-209ENST00000569896 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
RAB11A-209ENST00000569896 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.15
RAB11A-209ENST00000569896 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
RAB11A-209ENST00000569896 NACADO15069 1562 aa16■□□□□ 0.15
RAB11A-209ENST00000569896 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
RAB11A-209ENST00000569896 RNF216Q9NWF9 866 aaPredicted RBP15.98■□□□□ 0.15
RAB11A-209ENST00000569896 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
RAB11A-209ENST00000569896 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
RAB11A-209ENST00000569896 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
RAB11A-209ENST00000569896 NPM3O75607 178 aaKnown RBP15.75■□□□□ 0.11
RAB11A-209ENST00000569896 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RAB11A-209ENST00000569896 KCNA4P22459 653 aa15.69■□□□□ 0.1
RAB11A-209ENST00000569896 SCRIBQ14160 1630 aa15.61■□□□□ 0.09
RAB11A-209ENST00000569896 PABPN1Q86U42 306 aaKnown RBP eCLIP15.52■□□□□ 0.08
RAB11A-209ENST00000569896 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
RAB11A-209ENST00000569896 DNAJC5BQ9UF47 199 aa15.4■□□□□ 0.06
RAB11A-209ENST00000569896 RNF39Q9H2S5 420 aa15.36■□□□□ 0.05
RAB11A-209ENST00000569896 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
RAB11A-209ENST00000569896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
RAB11A-209ENST00000569896 SHROOM4Q9ULL8 1493 aa15.32■□□□□ 0.04
RAB11A-209ENST00000569896 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
RAB11A-209ENST00000569896 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
RAB11A-209ENST00000569896 CC2D2AQ9P2K1 1620 aa15.02■□□□□ -0
RAB11A-209ENST00000569896 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.02
RAB11A-209ENST00000569896 CECR2Q9BXF3 1484 aa14.95□□□□□ -0.02
RAB11A-209ENST00000569896 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
RAB11A-209ENST00000569896 SMARCA4P51532 1647 aa14.91□□□□□ -0.02
RAB11A-209ENST00000569896 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
RAB11A-209ENST00000569896 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
RAB11A-209ENST00000569896 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
RAB11A-209ENST00000569896 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
RAB11A-209ENST00000569896 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
RAB11A-209ENST00000569896 NCAPD3P42695 1498 aa14.72□□□□□ -0.05
RAB11A-209ENST00000569896 WIZO95785 1651 aa14.72□□□□□ -0.05
RAB11A-209ENST00000569896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
RAB11A-209ENST00000569896 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
RAB11A-209ENST00000569896 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.05
RAB11A-209ENST00000569896 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
RAB11A-209ENST00000569896 CAPN15O75808 1086 aa14.69□□□□□ -0.06
RAB11A-209ENST00000569896 HMGXB3Q12766 1538 aa14.68□□□□□ -0.06
RAB11A-209ENST00000569896 APLP2Q06481 763 aa14.68□□□□□ -0.06
RAB11A-209ENST00000569896 RSF1Q96T23 1441 aaPredicted RBP14.67□□□□□ -0.06
RAB11A-209ENST00000569896 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
RAB11A-209ENST00000569896 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
RAB11A-209ENST00000569896 MYCNP04198 464 aaPredicted RBP14.6□□□□□ -0.07
RAB11A-209ENST00000569896 FOXD4L1Q9NU39 408 aa14.6□□□□□ -0.07
RAB11A-209ENST00000569896 TOP2AP11388 1531 aaKnown RBP14.51□□□□□ -0.09
RAB11A-209ENST00000569896 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
RAB11A-209ENST00000569896 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
RAB11A-209ENST00000569896 SUPT5HO00267 1087 aaKnown RBP14.48□□□□□ -0.09
RAB11A-209ENST00000569896 DSG3P32926 999 aa14.47□□□□□ -0.09
RAB11A-209ENST00000569896 NESP48681 1621 aa14.38□□□□□ -0.11
RAB11A-209ENST00000569896 ZBTB22O15209 634 aa14.38□□□□□ -0.11
RAB11A-209ENST00000569896 LAMC3Q9Y6N6 1575 aa14.37□□□□□ -0.11
RAB11A-209ENST00000569896 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
RAB11A-209ENST00000569896 ABCB7O75027 752 aa14.34□□□□□ -0.11
RAB11A-209ENST00000569896 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
RAB11A-209ENST00000569896 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
RAB11A-209ENST00000569896 PRDM2Q13029 1718 aa14.29□□□□□ -0.12
RAB11A-209ENST00000569896 KIF21AQ7Z4S6 1674 aa14.29□□□□□ -0.12
RAB11A-209ENST00000569896 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
RAB11A-209ENST00000569896 CFTRP13569 1480 aa14.24□□□□□ -0.13
RAB11A-209ENST00000569896 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
RAB11A-209ENST00000569896 FANCD2Q9BXW9 1451 aa14.18□□□□□ -0.14
RAB11A-209ENST00000569896 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
RAB11A-209ENST00000569896 POLA2Q14181 598 aa14.17□□□□□ -0.14
RAB11A-209ENST00000569896 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
RAB11A-209ENST00000569896 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
RAB11A-209ENST00000569896 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
RAB11A-209ENST00000569896 MRC2Q9UBG0 1479 aa14.1□□□□□ -0.15
RAB11A-209ENST00000569896 CUX2O14529 1486 aa14.07□□□□□ -0.16
RAB11A-209ENST00000569896 WDR62O43379 1518 aa14.03□□□□□ -0.16
RAB11A-209ENST00000569896 EHMT2Q96KQ7 1210 aa14.02□□□□□ -0.17
RAB11A-209ENST00000569896 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.17
RAB11A-209ENST00000569896 CSRNP3Q8WYN3 585 aa13.99□□□□□ -0.17
RAB11A-209ENST00000569896 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
RAB11A-209ENST00000569896 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
RAB11A-209ENST00000569896 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
RAB11A-209ENST00000569896 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
RAB11A-209ENST00000569896 CUX1P39880 1505 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms