RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
GTF3C1-210ENST00000569394 ARAP1Q96P48 1450 aa15.2■□□□□ 0.02
GTF3C1-210ENST00000569394 NUP160Q12769 1436 aa15.2■□□□□ 0.02
GTF3C1-210ENST00000569394 ERCC6L2Q5T890 1561 aa15.19■□□□□ 0.02
GTF3C1-210ENST00000569394 CUL7Q14999 1698 aa15.19■□□□□ 0.02
GTF3C1-210ENST00000569394 TTBK1Q5TCY1 1321 aaPredicted RBP15.18■□□□□ 0.02
GTF3C1-210ENST00000569394 JPH4Q96JJ6 628 aa15.15■□□□□ 0.02
GTF3C1-210ENST00000569394 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
GTF3C1-210ENST00000569394 PRG4Q92954 1404 aaPredicted RBP15.12■□□□□ 0.01
GTF3C1-210ENST00000569394 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
GTF3C1-210ENST00000569394 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
GTF3C1-210ENST00000569394 SHROOM2Q13796 1616 aa15.09■□□□□ 0.01
GTF3C1-210ENST00000569394 ADRA2BP18089 450 aa15.07■□□□□ 0
GTF3C1-210ENST00000569394 FOXD1Q16676 465 aa15.07■□□□□ 0
GTF3C1-210ENST00000569394 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
GTF3C1-210ENST00000569394 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
GTF3C1-210ENST00000569394 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
GTF3C1-210ENST00000569394 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
GTF3C1-210ENST00000569394 IQGAP2Q13576 1575 aa15.01□□□□□ -0.01
GTF3C1-210ENST00000569394 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
GTF3C1-210ENST00000569394 CTTNBP2Q8WZ74 1663 aa14.97□□□□□ -0.01
GTF3C1-210ENST00000569394 P3H3Q8IVL6 736 aa14.97□□□□□ -0.01
GTF3C1-210ENST00000569394 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
GTF3C1-210ENST00000569394 PTPRGP23470 1445 aa14.92□□□□□ -0.02
GTF3C1-210ENST00000569394 EEA1Q15075 1411 aa14.92□□□□□ -0.02
GTF3C1-210ENST00000569394 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
GTF3C1-210ENST00000569394 TNIKQ9UKE5 1360 aa14.9□□□□□ -0.02
GTF3C1-210ENST00000569394 UBTFP17480 764 aaKnown RBP14.9□□□□□ -0.02
GTF3C1-210ENST00000569394 DISP1Q96F81 1524 aa14.9□□□□□ -0.02
GTF3C1-210ENST00000569394 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
GTF3C1-210ENST00000569394 KIAA0556O60303 1618 aa14.87□□□□□ -0.03
GTF3C1-210ENST00000569394 ADCY10Q96PN6 1610 aa14.87□□□□□ -0.03
GTF3C1-210ENST00000569394 ARID3CA6NKF2 412 aa14.86□□□□□ -0.03
GTF3C1-210ENST00000569394 KIF21BO75037 1637 aa14.83□□□□□ -0.04
GTF3C1-210ENST00000569394 GOLGA3Q08378 1498 aa14.81□□□□□ -0.04
GTF3C1-210ENST00000569394 FAM69CQ0P6D2 419 aa14.79□□□□□ -0.04
GTF3C1-210ENST00000569394 PLB1Q6P1J6 1458 aa14.79□□□□□ -0.04
GTF3C1-210ENST00000569394 UACAQ9BZF9 1416 aa14.79□□□□□ -0.04
GTF3C1-210ENST00000569394 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
GTF3C1-210ENST00000569394 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
GTF3C1-210ENST00000569394 KIF13AQ9H1H9 1805 aa14.74□□□□□ -0.05
GTF3C1-210ENST00000569394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-210ENST00000569394 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
GTF3C1-210ENST00000569394 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-210ENST00000569394 SAMD9Q5K651 1589 aa14.73□□□□□ -0.05
GTF3C1-210ENST00000569394 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
GTF3C1-210ENST00000569394 ZCCHC11Q5TAX3 1644 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-210ENST00000569394 KCNH8Q96L42 1107 aa14.71□□□□□ -0.05
GTF3C1-210ENST00000569394 UHRF1BP1LA0JNW5 1464 aa14.7□□□□□ -0.06
GTF3C1-210ENST00000569394 ASXL2Q76L83 1435 aa14.7□□□□□ -0.06
GTF3C1-210ENST00000569394 MAPKBP1O60336 1514 aa14.7□□□□□ -0.06
GTF3C1-210ENST00000569394 ABCA8O94911 1581 aa14.69□□□□□ -0.06
GTF3C1-210ENST00000569394 ABCC10Q5T3U5 1492 aa14.69□□□□□ -0.06
GTF3C1-210ENST00000569394 DIP2BQ9P265 1576 aa14.68□□□□□ -0.06
GTF3C1-210ENST00000569394 KDM5BQ9UGL1 1544 aa14.66□□□□□ -0.06
GTF3C1-210ENST00000569394 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
GTF3C1-210ENST00000569394 RAPGEF6Q8TEU7 1601 aa14.65□□□□□ -0.06
GTF3C1-210ENST00000569394 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
GTF3C1-210ENST00000569394 ARHGAP35Q9NRY4 1499 aa14.63□□□□□ -0.07
GTF3C1-210ENST00000569394 ATP10BO94823 1461 aa14.61□□□□□ -0.07
GTF3C1-210ENST00000569394 WDR7Q9Y4E6 1490 aa14.59□□□□□ -0.07
GTF3C1-210ENST00000569394 EPRSP07814 1512 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-210ENST00000569394 NUP153P49790 1475 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-210ENST00000569394 KCNA4P22459 653 aa14.56□□□□□ -0.08
GTF3C1-210ENST00000569394 CLIP1P30622 1438 aa14.55□□□□□ -0.08
GTF3C1-210ENST00000569394 CDK13Q14004 1512 aaKnown RBP14.55□□□□□ -0.08
GTF3C1-210ENST00000569394 GLI2P10070 1586 aa14.53□□□□□ -0.08
GTF3C1-210ENST00000569394 FMN1Q68DA7 1419 aa14.52□□□□□ -0.08
GTF3C1-210ENST00000569394 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.09
GTF3C1-210ENST00000569394 PPRC1Q5VV67 1664 aaKnown RBP14.52□□□□□ -0.09
GTF3C1-210ENST00000569394 KDM6BO15054 1643 aa14.51□□□□□ -0.09
GTF3C1-210ENST00000569394 MAP3K4Q9Y6R4 1608 aa14.51□□□□□ -0.09
GTF3C1-210ENST00000569394 CD109Q6YHK3 1445 aa14.5□□□□□ -0.09
GTF3C1-210ENST00000569394 HECW1Q76N89 1606 aa14.48□□□□□ -0.09
GTF3C1-210ENST00000569394 PCF11O94913 1555 aaKnown RBP14.48□□□□□ -0.09
GTF3C1-210ENST00000569394 LRRIQ1Q96JM4 1722 aa14.48□□□□□ -0.09
GTF3C1-210ENST00000569394 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
GTF3C1-210ENST00000569394 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
GTF3C1-210ENST00000569394 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
GTF3C1-210ENST00000569394 COL17A1Q9UMD9 1497 aaPredicted RBP14.43□□□□□ -0.1
GTF3C1-210ENST00000569394 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
GTF3C1-210ENST00000569394 ABCA9Q8IUA7 1624 aa14.41□□□□□ -0.1
GTF3C1-210ENST00000569394 CDK11AQ9UQ88 783 aaPredicted RBP14.41□□□□□ -0.1
GTF3C1-210ENST00000569394 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
GTF3C1-210ENST00000569394 KIF14Q15058 1648 aa14.39□□□□□ -0.11
GTF3C1-210ENST00000569394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.11
GTF3C1-210ENST00000569394 MAGI3Q5TCQ9 1506 aa14.38□□□□□ -0.11
GTF3C1-210ENST00000569394 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
GTF3C1-210ENST00000569394 FYCO1Q9BQS8 1478 aa14.36□□□□□ -0.11
GTF3C1-210ENST00000569394 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
GTF3C1-210ENST00000569394 TROQ12816 1431 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-210ENST00000569394 KDM4FA0A1W2PPD8 638 aa14.34□□□□□ -0.11
GTF3C1-210ENST00000569394 FANCAO15360 1455 aa14.31□□□□□ -0.12
GTF3C1-210ENST00000569394 ZNF777Q9ULD5 760 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-210ENST00000569394 MYO5CQ9NQX4 1742 aa14.3□□□□□ -0.12
GTF3C1-210ENST00000569394 AKNAQ7Z591 1439 aa14.3□□□□□ -0.12
GTF3C1-210ENST00000569394 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
GTF3C1-210ENST00000569394 MTUS2Q5JR59 1369 aa14.29□□□□□ -0.12
GTF3C1-210ENST00000569394 ARHGAP5Q13017 1502 aa14.29□□□□□ -0.12
GTF3C1-210ENST00000569394 PLCH2O75038 1416 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms