RNA–Protein interactions for RNA: ENST00000569380.5

SPSB3-211, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-211ENST00000569380 SYNJ2O15056 1496 aa33.07■■■□□ 2.88
SPSB3-211ENST00000569380 CHMP7Q8WUX9 453 aaPredicted RBP33.06■■■□□ 2.88
SPSB3-211ENST00000569380 ARHGEF11O15085 1522 aa33.05■■■□□ 2.88
SPSB3-211ENST00000569380 TNIKQ9UKE5 1360 aa33.02■■■□□ 2.88
SPSB3-211ENST00000569380 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
SPSB3-211ENST00000569380 CLASP1Q7Z460 1538 aa32.95■■■□□ 2.87
SPSB3-211ENST00000569380 RANGAP1P46060 587 aaPredicted RBP32.95■■■□□ 2.87
SPSB3-211ENST00000569380 CTTNBP2Q8WZ74 1663 aa32.9■■■□□ 2.86
SPSB3-211ENST00000569380 CEP170Q5SW79 1584 aa32.89■■■□□ 2.86
SPSB3-211ENST00000569380 CEP162Q5TB80 1403 aa32.85■■■□□ 2.85
SPSB3-211ENST00000569380 NUP160Q12769 1436 aa32.8■■■□□ 2.84
SPSB3-211ENST00000569380 ARAP1Q96P48 1450 aa32.78■■■□□ 2.84
SPSB3-211ENST00000569380 CYB5RLQ6IPT4 315 aa32.74■■■□□ 2.83
SPSB3-211ENST00000569380 CLIP1P30622 1438 aa32.73■■■□□ 2.83
SPSB3-211ENST00000569380 IQGAP2Q13576 1575 aa32.72■■■□□ 2.83
SPSB3-211ENST00000569380 KIAA0586Q9BVV6 1533 aa32.71■■■□□ 2.83
SPSB3-211ENST00000569380 ARHGAP35Q9NRY4 1499 aa32.64■■■□□ 2.81
SPSB3-211ENST00000569380 P3H3Q8IVL6 736 aa32.6■■■□□ 2.81
SPSB3-211ENST00000569380 ERCC6L2Q5T890 1561 aa32.55■■■□□ 2.8
SPSB3-211ENST00000569380 UGGT2Q9NYU1 1516 aa32.54■■■□□ 2.8
SPSB3-211ENST00000569380 SAMD9Q5K651 1589 aa32.53■■■□□ 2.8
SPSB3-211ENST00000569380 JPH4Q96JJ6 628 aa32.53■■■□□ 2.8
SPSB3-211ENST00000569380 FHOD3Q2V2M9 1422 aa32.49■■■□□ 2.79
SPSB3-211ENST00000569380 SHROOM2Q13796 1616 aa32.49■■■□□ 2.79
SPSB3-211ENST00000569380 EFCAB5A4FU69 1503 aa32.48■■■□□ 2.79
SPSB3-211ENST00000569380 DISP1Q96F81 1524 aa32.47■■■□□ 2.79
SPSB3-211ENST00000569380 KIAA0556O60303 1618 aa32.42■■■□□ 2.78
SPSB3-211ENST00000569380 PRG4Q92954 1404 aaPredicted RBP32.4■■■□□ 2.78
SPSB3-211ENST00000569380 TTBK1Q5TCY1 1321 aaPredicted RBP32.36■■■□□ 2.77
SPSB3-211ENST00000569380 VPS8Q8N3P4 1428 aa32.33■■■□□ 2.77
SPSB3-211ENST00000569380 CARMIL2Q6F5E8 1435 aa32.29■■■□□ 2.76
SPSB3-211ENST00000569380 PCF11O94913 1555 aaKnown RBP32.21■■■□□ 2.75
SPSB3-211ENST00000569380 FMN1Q68DA7 1419 aa32.17■■■□□ 2.74
SPSB3-211ENST00000569380 TRHP20396 242 aaPredicted RBP32.17■■■□□ 2.74
SPSB3-211ENST00000569380 ATP1B4Q9UN42 357 aaPredicted RBP32.13■■■□□ 2.73
SPSB3-211ENST00000569380 PPARGC1BQ86YN6 1023 aaKnown RBP32.1■■■□□ 2.73
SPSB3-211ENST00000569380 PTPRGP23470 1445 aa32.09■■■□□ 2.73
SPSB3-211ENST00000569380 PLB1Q6P1J6 1458 aa32.09■■■□□ 2.73
SPSB3-211ENST00000569380 CASKIN1Q8WXD9 1431 aa32.08■■■□□ 2.73
SPSB3-211ENST00000569380 LRRIQ1Q96JM4 1722 aa32.05■■■□□ 2.72
SPSB3-211ENST00000569380 FYCO1Q9BQS8 1478 aa32.05■■■□□ 2.72
SPSB3-211ENST00000569380 ARID3CA6NKF2 412 aa32.03■■■□□ 2.72
SPSB3-211ENST00000569380 RAPGEF6Q8TEU7 1601 aa32.03■■■□□ 2.72
SPSB3-211ENST00000569380 ABCA8O94911 1581 aa31.99■■■□□ 2.71
SPSB3-211ENST00000569380 HECW1Q76N89 1606 aa31.96■■■□□ 2.71
SPSB3-211ENST00000569380 NUP153P49790 1475 aaKnown RBP31.95■■■□□ 2.71
SPSB3-211ENST00000569380 ADCY10Q96PN6 1610 aa31.92■■■□□ 2.7
SPSB3-211ENST00000569380 APLP2Q06481 763 aa31.91■■■□□ 2.7
SPSB3-211ENST00000569380 CDK13Q14004 1512 aaKnown RBP31.91■■■□□ 2.7
SPSB3-211ENST00000569380 TIAM1Q13009 1591 aa31.91■■■□□ 2.7
SPSB3-211ENST00000569380 KANK4Q5T7N3 995 aaPredicted RBP31.9■■■□□ 2.7
SPSB3-211ENST00000569380 UACAQ9BZF9 1416 aa31.9■■■□□ 2.7
SPSB3-211ENST00000569380 CFAP43Q8NDM7 1665 aa31.89■■■□□ 2.7
SPSB3-211ENST00000569380 EPRSP07814 1512 aaKnown RBP31.88■■■□□ 2.69
SPSB3-211ENST00000569380 ABCC2Q92887 1545 aa31.82■■■□□ 2.68
SPSB3-211ENST00000569380 MAP3K1Q13233 1512 aa31.8■■■□□ 2.68
SPSB3-211ENST00000569380 CCDC18Q5T9S5 1454 aa31.78■■■□□ 2.68
SPSB3-211ENST00000569380 ATP10BO94823 1461 aa31.77■■■□□ 2.68
SPSB3-211ENST00000569380 MAGI3Q5TCQ9 1506 aa31.77■■■□□ 2.68
SPSB3-211ENST00000569380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.76■■■□□ 2.68
SPSB3-211ENST00000569380 HNRNPUL2Q1KMD3 747 aaKnown RBP31.76■■■□□ 2.68
SPSB3-211ENST00000569380 LRRC9Q6ZRR7 1453 aa31.75■■■□□ 2.67
SPSB3-211ENST00000569380 UHRF1BP1LA0JNW5 1464 aa31.74■■■□□ 2.67
SPSB3-211ENST00000569380 MAPKBP1O60336 1514 aa31.74■■■□□ 2.67
SPSB3-211ENST00000569380 NPM1P06748 294 aaKnown RBP eCLIP31.73■■■□□ 2.67
SPSB3-211ENST00000569380 KIF13AQ9H1H9 1805 aa31.68■■■□□ 2.66
SPSB3-211ENST00000569380 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
SPSB3-211ENST00000569380 MTUS2Q5JR59 1369 aa31.65■■■□□ 2.66
SPSB3-211ENST00000569380 KDM5BQ9UGL1 1544 aa31.64■■■□□ 2.66
SPSB3-211ENST00000569380 ABCC10Q5T3U5 1492 aa31.64■■■□□ 2.66
SPSB3-211ENST00000569380 DIP2BQ9P265 1576 aa31.61■■■□□ 2.65
SPSB3-211ENST00000569380 EHBP1L1Q8N3D4 1523 aa31.6■■■□□ 2.65
SPSB3-211ENST00000569380 FAM69CQ0P6D2 419 aa31.58■■■□□ 2.65
SPSB3-211ENST00000569380 TROQ12816 1431 aaPredicted RBP31.53■■■□□ 2.64
SPSB3-211ENST00000569380 CDK11AQ9UQ88 783 aaPredicted RBP31.53■■■□□ 2.64
SPSB3-211ENST00000569380 PLEKHD1A6NEE1 506 aa31.52■■■□□ 2.64
SPSB3-211ENST00000569380 KIF14Q15058 1648 aa31.51■■■□□ 2.63
SPSB3-211ENST00000569380 ASXL2Q76L83 1435 aa31.51■■■□□ 2.63
SPSB3-211ENST00000569380 SUPT6HQ7KZ85 1726 aaKnown RBP31.49■■■□□ 2.63
SPSB3-211ENST00000569380 NCOA2Q15596 1464 aa31.49■■■□□ 2.63
SPSB3-211ENST00000569380 PHLDB1Q86UU1 1377 aa31.49■■■□□ 2.63
SPSB3-211ENST00000569380 KCNH8Q96L42 1107 aa31.4■■■□□ 2.62
SPSB3-211ENST00000569380 WDR7Q9Y4E6 1490 aa31.37■■■□□ 2.61
SPSB3-211ENST00000569380 TRIM26Q12899 539 aaPredicted RBP31.35■■■□□ 2.61
SPSB3-211ENST00000569380 GLI2P10070 1586 aa31.31■■■□□ 2.6
SPSB3-211ENST00000569380 TSPOAP1O95153 1857 aa31.31■■■□□ 2.6
SPSB3-211ENST00000569380 TTC37Q6PGP7 1564 aa31.31■■■□□ 2.6
SPSB3-211ENST00000569380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.3■■■□□ 2.6
SPSB3-211ENST00000569380 MYOM3Q5VTT5 1437 aa31.29■■■□□ 2.6
SPSB3-211ENST00000569380 PCGF6Q9BYE7 350 aa31.28■■■□□ 2.6
SPSB3-211ENST00000569380 CCNB3Q8WWL7 1395 aa31.28■■■□□ 2.6
SPSB3-211ENST00000569380 RRBP1Q9P2E9 1410 aaKnown RBP31.25■■■□□ 2.59
SPSB3-211ENST00000569380 CDC42BPAQ5VT25 1732 aa31.25■■■□□ 2.59
SPSB3-211ENST00000569380 FGD6Q6ZV73 1430 aa31.24■■■□□ 2.59
SPSB3-211ENST00000569380 GPATCH8Q9UKJ3 1502 aaKnown RBP31.24■■■□□ 2.59
SPSB3-211ENST00000569380 PPRC1Q5VV67 1664 aaKnown RBP31.22■■■□□ 2.59
SPSB3-211ENST00000569380 MAP3K4Q9Y6R4 1608 aa31.2■■■□□ 2.58
SPSB3-211ENST00000569380 FAM50AQ14320 339 aaKnown RBP31.17■■■□□ 2.58
SPSB3-211ENST00000569380 KDM6BO15054 1643 aa31.17■■■□□ 2.58
SPSB3-211ENST00000569380 ITSN2Q9NZM3 1697 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms