RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 JPH4Q96JJ6 628 aa14.93□□□□□ -0.02
CHD9-219ENST00000569225 GOLGA3Q08378 1498 aa14.92□□□□□ -0.02
CHD9-219ENST00000569225 IQGAP2Q13576 1575 aa14.91□□□□□ -0.02
CHD9-219ENST00000569225 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
CHD9-219ENST00000569225 SHROOM2Q13796 1616 aa14.89□□□□□ -0.03
CHD9-219ENST00000569225 UBTFP17480 764 aaKnown RBP14.89□□□□□ -0.03
CHD9-219ENST00000569225 PRG4Q92954 1404 aaPredicted RBP14.88□□□□□ -0.03
CHD9-219ENST00000569225 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
CHD9-219ENST00000569225 CARMIL2Q6F5E8 1435 aa14.85□□□□□ -0.03
CHD9-219ENST00000569225 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
CHD9-219ENST00000569225 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
CHD9-219ENST00000569225 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
CHD9-219ENST00000569225 CTTNBP2Q8WZ74 1663 aa14.85□□□□□ -0.03
CHD9-219ENST00000569225 UGGT2Q9NYU1 1516 aa14.84□□□□□ -0.03
CHD9-219ENST00000569225 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
CHD9-219ENST00000569225 ARAP1Q96P48 1450 aa14.79□□□□□ -0.04
CHD9-219ENST00000569225 CYB5RLQ6IPT4 315 aa14.78□□□□□ -0.04
CHD9-219ENST00000569225 DISP1Q96F81 1524 aa14.78□□□□□ -0.04
CHD9-219ENST00000569225 TNIKQ9UKE5 1360 aa14.77□□□□□ -0.04
CHD9-219ENST00000569225 RANGAP1P46060 587 aaPredicted RBP14.76□□□□□ -0.05
CHD9-219ENST00000569225 PTPRGP23470 1445 aa14.75□□□□□ -0.05
CHD9-219ENST00000569225 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
CHD9-219ENST00000569225 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
CHD9-219ENST00000569225 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.05
CHD9-219ENST00000569225 SAMD9Q5K651 1589 aa14.71□□□□□ -0.05
CHD9-219ENST00000569225 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
CHD9-219ENST00000569225 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
CHD9-219ENST00000569225 CLIP1P30622 1438 aa14.66□□□□□ -0.06
CHD9-219ENST00000569225 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
CHD9-219ENST00000569225 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
CHD9-219ENST00000569225 UACAQ9BZF9 1416 aa14.64□□□□□ -0.07
CHD9-219ENST00000569225 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHD9-219ENST00000569225 CEP162Q5TB80 1403 aa14.63□□□□□ -0.07
CHD9-219ENST00000569225 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
CHD9-219ENST00000569225 FMN1Q68DA7 1419 aa14.61□□□□□ -0.07
CHD9-219ENST00000569225 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
CHD9-219ENST00000569225 PLB1Q6P1J6 1458 aa14.6□□□□□ -0.07
CHD9-219ENST00000569225 ABCA8O94911 1581 aa14.58□□□□□ -0.08
CHD9-219ENST00000569225 ADCY10Q96PN6 1610 aa14.58□□□□□ -0.08
CHD9-219ENST00000569225 KDM5BQ9UGL1 1544 aa14.53□□□□□ -0.08
CHD9-219ENST00000569225 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
CHD9-219ENST00000569225 ATP1B4Q9UN42 357 aaPredicted RBP14.5□□□□□ -0.09
CHD9-219ENST00000569225 CASKIN1Q8WXD9 1431 aa14.5□□□□□ -0.09
CHD9-219ENST00000569225 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
CHD9-219ENST00000569225 MAPKBP1O60336 1514 aa14.49□□□□□ -0.09
CHD9-219ENST00000569225 ARID3CA6NKF2 412 aa14.48□□□□□ -0.09
CHD9-219ENST00000569225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
CHD9-219ENST00000569225 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
CHD9-219ENST00000569225 HECW1Q76N89 1606 aa14.47□□□□□ -0.09
CHD9-219ENST00000569225 ATP10BO94823 1461 aa14.47□□□□□ -0.09
CHD9-219ENST00000569225 FYCO1Q9BQS8 1478 aa14.47□□□□□ -0.09
CHD9-219ENST00000569225 ASXL2Q76L83 1435 aa14.46□□□□□ -0.09
CHD9-219ENST00000569225 ZCCHC11Q5TAX3 1644 aaKnown RBP14.46□□□□□ -0.09
CHD9-219ENST00000569225 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
CHD9-219ENST00000569225 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
CHD9-219ENST00000569225 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
CHD9-219ENST00000569225 CDK11AQ9UQ88 783 aaPredicted RBP14.44□□□□□ -0.1
CHD9-219ENST00000569225 EPRSP07814 1512 aaKnown RBP14.43□□□□□ -0.1
CHD9-219ENST00000569225 CCDC18Q5T9S5 1454 aa14.43□□□□□ -0.1
CHD9-219ENST00000569225 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
CHD9-219ENST00000569225 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
CHD9-219ENST00000569225 ABCC10Q5T3U5 1492 aa14.41□□□□□ -0.1
CHD9-219ENST00000569225 CDK13Q14004 1512 aaKnown RBP14.4□□□□□ -0.11
CHD9-219ENST00000569225 FAM69CQ0P6D2 419 aa14.39□□□□□ -0.11
CHD9-219ENST00000569225 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
CHD9-219ENST00000569225 DIP2BQ9P265 1576 aa14.35□□□□□ -0.11
CHD9-219ENST00000569225 APLP2Q06481 763 aa14.35□□□□□ -0.11
CHD9-219ENST00000569225 GLI2P10070 1586 aa14.33□□□□□ -0.11
CHD9-219ENST00000569225 TROQ12816 1431 aaPredicted RBP14.33□□□□□ -0.12
CHD9-219ENST00000569225 MTUS2Q5JR59 1369 aa14.31□□□□□ -0.12
CHD9-219ENST00000569225 MAP3K1Q13233 1512 aa14.3□□□□□ -0.12
CHD9-219ENST00000569225 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
CHD9-219ENST00000569225 CD109Q6YHK3 1445 aa14.28□□□□□ -0.12
CHD9-219ENST00000569225 TIAM1Q13009 1591 aa14.28□□□□□ -0.12
CHD9-219ENST00000569225 KIF14Q15058 1648 aa14.27□□□□□ -0.13
CHD9-219ENST00000569225 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
CHD9-219ENST00000569225 EHBP1L1Q8N3D4 1523 aa14.26□□□□□ -0.13
CHD9-219ENST00000569225 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
CHD9-219ENST00000569225 MAGI3Q5TCQ9 1506 aa14.25□□□□□ -0.13
CHD9-219ENST00000569225 ABCA9Q8IUA7 1624 aa14.25□□□□□ -0.13
CHD9-219ENST00000569225 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
CHD9-219ENST00000569225 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
CHD9-219ENST00000569225 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
CHD9-219ENST00000569225 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.24□□□□□ -0.13
CHD9-219ENST00000569225 TTC37Q6PGP7 1564 aa14.2□□□□□ -0.14
CHD9-219ENST00000569225 KANK4Q5T7N3 995 aaPredicted RBP14.2□□□□□ -0.14
CHD9-219ENST00000569225 PLCH2O75038 1416 aa14.19□□□□□ -0.14
CHD9-219ENST00000569225 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
CHD9-219ENST00000569225 PHLDB1Q86UU1 1377 aa14.19□□□□□ -0.14
CHD9-219ENST00000569225 ARAP3Q8WWN8 1544 aa14.17□□□□□ -0.14
CHD9-219ENST00000569225 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
CHD9-219ENST00000569225 EFCAB2Q5VUJ9 269 aa14.17□□□□□ -0.14
CHD9-219ENST00000569225 NEO1Q92859 1461 aa14.17□□□□□ -0.14
CHD9-219ENST00000569225 FANCAO15360 1455 aa14.16□□□□□ -0.14
CHD9-219ENST00000569225 SUPT6HQ7KZ85 1726 aaKnown RBP14.16□□□□□ -0.14
CHD9-219ENST00000569225 TSPOAP1O95153 1857 aa14.15□□□□□ -0.14
CHD9-219ENST00000569225 PPRC1Q5VV67 1664 aaKnown RBP14.15□□□□□ -0.14
CHD9-219ENST00000569225 ARHGAP5Q13017 1502 aa14.14□□□□□ -0.15
CHD9-219ENST00000569225 GPATCH8Q9UKJ3 1502 aaKnown RBP14.14□□□□□ -0.15
CHD9-219ENST00000569225 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms