RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 KIF21AQ7Z4S6 1674 aa15.13■□□□□ 0.01
CNOT1-214ENST00000568917 RUSC2Q8N2Y8 1516 aa15.12■□□□□ 0.01
CNOT1-214ENST00000568917 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CNOT1-214ENST00000568917 KIF27Q86VH2 1401 aa15.12■□□□□ 0.01
CNOT1-214ENST00000568917 GOLGA3Q08378 1498 aa15.09■□□□□ 0.01
CNOT1-214ENST00000568917 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
CNOT1-214ENST00000568917 ABCA10Q8WWZ4 1543 aa15.06■□□□□ 0
CNOT1-214ENST00000568917 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
CNOT1-214ENST00000568917 TNIKQ9UKE5 1360 aa15.05■□□□□ 0
CNOT1-214ENST00000568917 ERICH3Q5RHP9 1530 aa15.05■□□□□ 0
CNOT1-214ENST00000568917 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
CNOT1-214ENST00000568917 POLA2Q14181 598 aa15.03■□□□□ -0
CNOT1-214ENST00000568917 PRXQ9BXM0 1461 aa15.02■□□□□ -0
CNOT1-214ENST00000568917 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
CNOT1-214ENST00000568917 CUX2O14529 1486 aa15.01□□□□□ -0.01
CNOT1-214ENST00000568917 WDR62O43379 1518 aa14.99□□□□□ -0.01
CNOT1-214ENST00000568917 RAD54L2Q9Y4B4 1467 aa14.94□□□□□ -0.02
CNOT1-214ENST00000568917 RAPGEF2Q9Y4G8 1499 aa14.94□□□□□ -0.02
CNOT1-214ENST00000568917 IGF1RP08069 1367 aa14.94□□□□□ -0.02
CNOT1-214ENST00000568917 TARBP1Q13395 1621 aaKnown RBP14.93□□□□□ -0.02
CNOT1-214ENST00000568917 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
CNOT1-214ENST00000568917 CUL7Q14999 1698 aa14.93□□□□□ -0.02
CNOT1-214ENST00000568917 ABCA5Q8WWZ7 1642 aa14.93□□□□□ -0.02
CNOT1-214ENST00000568917 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
CNOT1-214ENST00000568917 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
CNOT1-214ENST00000568917 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
CNOT1-214ENST00000568917 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
CNOT1-214ENST00000568917 CARMIL1Q5VZK9 1371 aa14.87□□□□□ -0.03
CNOT1-214ENST00000568917 GAPVD1Q14C86 1478 aa14.86□□□□□ -0.03
CNOT1-214ENST00000568917 PBRM1Q86U86 1689 aa14.8□□□□□ -0.04
CNOT1-214ENST00000568917 CLIP1P30622 1438 aa14.8□□□□□ -0.04
CNOT1-214ENST00000568917 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
CNOT1-214ENST00000568917 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
CNOT1-214ENST00000568917 FHAD1B1AJZ9 1412 aa14.73□□□□□ -0.05
CNOT1-214ENST00000568917 CTTNBP2Q8WZ74 1663 aa14.73□□□□□ -0.05
CNOT1-214ENST00000568917 ADAMTS12P58397 1594 aa14.71□□□□□ -0.05
CNOT1-214ENST00000568917 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.05
CNOT1-214ENST00000568917 EIF4G3O43432 1585 aaKnown RBP14.71□□□□□ -0.06
CNOT1-214ENST00000568917 AQRO60306 1485 aaKnown RBP eCLIP14.7□□□□□ -0.061e-6■■■□□ 19.1
CNOT1-214ENST00000568917 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
CNOT1-214ENST00000568917 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
CNOT1-214ENST00000568917 EFCAB5A4FU69 1503 aa14.67□□□□□ -0.06
CNOT1-214ENST00000568917 MAGI1Q96QZ7 1491 aaPredicted RBP14.67□□□□□ -0.06
CNOT1-214ENST00000568917 ARHGAP35Q9NRY4 1499 aa14.66□□□□□ -0.06
CNOT1-214ENST00000568917 ARAP1Q96P48 1450 aa14.65□□□□□ -0.06
CNOT1-214ENST00000568917 TRIM26Q12899 539 aaPredicted RBP14.65□□□□□ -0.06
CNOT1-214ENST00000568917 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
CNOT1-214ENST00000568917 SNAPC4Q5SXM2 1469 aa14.61□□□□□ -0.07
CNOT1-214ENST00000568917 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
CNOT1-214ENST00000568917 SAMD9Q5K651 1589 aa14.57□□□□□ -0.08
CNOT1-214ENST00000568917 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
CNOT1-214ENST00000568917 IQGAP2Q13576 1575 aa14.56□□□□□ -0.08
CNOT1-214ENST00000568917 MAP3K1Q13233 1512 aa14.55□□□□□ -0.08
CNOT1-214ENST00000568917 FBLN2P98095 1184 aa14.55□□□□□ -0.08
CNOT1-214ENST00000568917 KIAA0586Q9BVV6 1533 aa14.54□□□□□ -0.08
CNOT1-214ENST00000568917 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
CNOT1-214ENST00000568917 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.08
CNOT1-214ENST00000568917 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
CNOT1-214ENST00000568917 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
CNOT1-214ENST00000568917 RANGAP1P46060 587 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-214ENST00000568917 NUP160Q12769 1436 aa14.49□□□□□ -0.09
CNOT1-214ENST00000568917 FYCO1Q9BQS8 1478 aa14.48□□□□□ -0.09
CNOT1-214ENST00000568917 CHMP7Q8WUX9 453 aaPredicted RBP14.46□□□□□ -0.09
CNOT1-214ENST00000568917 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
CNOT1-214ENST00000568917 CASKIN1Q8WXD9 1431 aa14.46□□□□□ -0.1
CNOT1-214ENST00000568917 CEP170Q5SW79 1584 aa14.45□□□□□ -0.1
CNOT1-214ENST00000568917 FHOD3Q2V2M9 1422 aa14.45□□□□□ -0.1
CNOT1-214ENST00000568917 PCF11O94913 1555 aaKnown RBP14.44□□□□□ -0.1
CNOT1-214ENST00000568917 TIAM1Q13009 1591 aa14.43□□□□□ -0.1
CNOT1-214ENST00000568917 CFAP43Q8NDM7 1665 aa14.43□□□□□ -0.1
CNOT1-214ENST00000568917 KIAA0556O60303 1618 aa14.41□□□□□ -0.1
CNOT1-214ENST00000568917 DISP1Q96F81 1524 aa14.38□□□□□ -0.11
CNOT1-214ENST00000568917 CHD1O14646 1710 aa14.37□□□□□ -0.11
CNOT1-214ENST00000568917 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
CNOT1-214ENST00000568917 PPARGC1BQ86YN6 1023 aaKnown RBP14.36□□□□□ -0.11
CNOT1-214ENST00000568917 CCDC18Q5T9S5 1454 aa14.36□□□□□ -0.11
CNOT1-214ENST00000568917 HECW1Q76N89 1606 aa14.35□□□□□ -0.11
CNOT1-214ENST00000568917 LRRC9Q6ZRR7 1453 aa14.35□□□□□ -0.11
CNOT1-214ENST00000568917 P3H3Q8IVL6 736 aa14.35□□□□□ -0.11
CNOT1-214ENST00000568917 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
CNOT1-214ENST00000568917 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
CNOT1-214ENST00000568917 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
CNOT1-214ENST00000568917 KANK4Q5T7N3 995 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-214ENST00000568917 JPH4Q96JJ6 628 aa14.31□□□□□ -0.12
CNOT1-214ENST00000568917 SHROOM2Q13796 1616 aa14.31□□□□□ -0.12
CNOT1-214ENST00000568917 RRBP1Q9P2E9 1410 aaKnown RBP14.3□□□□□ -0.12
CNOT1-214ENST00000568917 LRRIQ1Q96JM4 1722 aa14.29□□□□□ -0.12
CNOT1-214ENST00000568917 AKT1S1Q96B36 256 aa14.28□□□□□ -0.12
CNOT1-214ENST00000568917 RAPGEF6Q8TEU7 1601 aa14.28□□□□□ -0.12
CNOT1-214ENST00000568917 EHBP1L1Q8N3D4 1523 aa14.26□□□□□ -0.13
CNOT1-214ENST00000568917 EPRSP07814 1512 aaKnown RBP14.26□□□□□ -0.13
CNOT1-214ENST00000568917 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
CNOT1-214ENST00000568917 SSUH2Q9Y2M2 353 aa14.24□□□□□ -0.13
CNOT1-214ENST00000568917 TTBK1Q5TCY1 1321 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-214ENST00000568917 ZNF692Q9BU19 519 aaPredicted RBP14.23□□□□□ -0.13
CNOT1-214ENST00000568917 SUPT6HQ7KZ85 1726 aaKnown RBP14.22□□□□□ -0.13
CNOT1-214ENST00000568917 PRG4Q92954 1404 aaPredicted RBP14.21□□□□□ -0.13
CNOT1-214ENST00000568917 MTUS2Q5JR59 1369 aa14.21□□□□□ -0.13
CNOT1-214ENST00000568917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.21□□□□□ -0.13
CNOT1-214ENST00000568917 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms