RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 KIF21BO75037 1637 aa16.67■□□□□ 0.26
PKM-221ENST00000568743 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
PKM-221ENST00000568743 JPH4Q96JJ6 628 aa16.63■□□□□ 0.25
PKM-221ENST00000568743 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
PKM-221ENST00000568743 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
PKM-221ENST00000568743 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
PKM-221ENST00000568743 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
PKM-221ENST00000568743 RIMBP3CA6NJZ7 1639 aa16.59■□□□□ 0.25
PKM-221ENST00000568743 RIMBP3BA6NNM3 1639 aa16.59■□□□□ 0.25
PKM-221ENST00000568743 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
PKM-221ENST00000568743 RIMBP3Q9UFD9 1639 aa16.59■□□□□ 0.25
PKM-221ENST00000568743 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
PKM-221ENST00000568743 CTTNBP2Q8WZ74 1663 aa16.57■□□□□ 0.24
PKM-221ENST00000568743 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
PKM-221ENST00000568743 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
PKM-221ENST00000568743 ARAP1Q96P48 1450 aa16.53■□□□□ 0.24
PKM-221ENST00000568743 UGGT2Q9NYU1 1516 aa16.52■□□□□ 0.24
PKM-221ENST00000568743 CYB5RLQ6IPT4 315 aa16.5■□□□□ 0.23
PKM-221ENST00000568743 DISP1Q96F81 1524 aa16.5■□□□□ 0.23
PKM-221ENST00000568743 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
PKM-221ENST00000568743 LOC105371045A0A1W2PR82 267 aa16.49■□□□□ 0.23
PKM-221ENST00000568743 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
PKM-221ENST00000568743 P3H3Q8IVL6 736 aa16.46■□□□□ 0.23
PKM-221ENST00000568743 KIAA0556O60303 1618 aa16.45■□□□□ 0.22
PKM-221ENST00000568743 TNIKQ9UKE5 1360 aa16.43■□□□□ 0.22
PKM-221ENST00000568743 PTPRGP23470 1445 aa16.41■□□□□ 0.22
PKM-221ENST00000568743 SAMD9Q5K651 1589 aa16.4■□□□□ 0.22
PKM-221ENST00000568743 FHOD3Q2V2M9 1422 aa16.38■□□□□ 0.21
PKM-221ENST00000568743 ARHGAP35Q9NRY4 1499 aa16.35■□□□□ 0.21
PKM-221ENST00000568743 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
PKM-221ENST00000568743 CLIP1P30622 1438 aa16.33■□□□□ 0.2
PKM-221ENST00000568743 CEP162Q5TB80 1403 aa16.32■□□□□ 0.2
PKM-221ENST00000568743 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
PKM-221ENST00000568743 ADCY10Q96PN6 1610 aa16.3■□□□□ 0.2
PKM-221ENST00000568743 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
PKM-221ENST00000568743 ABCC2Q92887 1545 aa16.26■□□□□ 0.19
PKM-221ENST00000568743 ABCA8O94911 1581 aa16.26■□□□□ 0.19
PKM-221ENST00000568743 UHRF1BP1LA0JNW5 1464 aa16.24■□□□□ 0.19
PKM-221ENST00000568743 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
PKM-221ENST00000568743 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
PKM-221ENST00000568743 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
PKM-221ENST00000568743 RAPGEF6Q8TEU7 1601 aa16.21■□□□□ 0.19
PKM-221ENST00000568743 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
PKM-221ENST00000568743 NUP153P49790 1475 aaKnown RBP16.18■□□□□ 0.18
PKM-221ENST00000568743 KDM5BQ9UGL1 1544 aa16.18■□□□□ 0.18
PKM-221ENST00000568743 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
PKM-221ENST00000568743 PCF11O94913 1555 aaKnown RBP16.15■□□□□ 0.18
PKM-221ENST00000568743 ATP10BO94823 1461 aa16.15■□□□□ 0.18
PKM-221ENST00000568743 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.14■□□□□ 0.17
PKM-221ENST00000568743 HNRNPUL2Q1KMD3 747 aaKnown RBP16.14■□□□□ 0.17
PKM-221ENST00000568743 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
PKM-221ENST00000568743 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
PKM-221ENST00000568743 MAPKBP1O60336 1514 aa16.12■□□□□ 0.17
PKM-221ENST00000568743 HECW1Q76N89 1606 aa16.12■□□□□ 0.17
PKM-221ENST00000568743 CDK13Q14004 1512 aaKnown RBP16.11■□□□□ 0.17
PKM-221ENST00000568743 TRHP20396 242 aaPredicted RBP16.1■□□□□ 0.17
PKM-221ENST00000568743 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
PKM-221ENST00000568743 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
PKM-221ENST00000568743 EPRSP07814 1512 aaKnown RBP16.09■□□□□ 0.17
PKM-221ENST00000568743 WDR7Q9Y4E6 1490 aa16.06■□□□□ 0.16
PKM-221ENST00000568743 KCNH8Q96L42 1107 aa16.05■□□□□ 0.16
PKM-221ENST00000568743 LRRIQ1Q96JM4 1722 aa16.05■□□□□ 0.16
PKM-221ENST00000568743 ABCC10Q5T3U5 1492 aa16.04■□□□□ 0.16
PKM-221ENST00000568743 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
PKM-221ENST00000568743 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
PKM-221ENST00000568743 DIP2BQ9P265 1576 aa16.02■□□□□ 0.16
PKM-221ENST00000568743 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.16
PKM-221ENST00000568743 CDK11AQ9UQ88 783 aaPredicted RBP15.98■□□□□ 0.15
PKM-221ENST00000568743 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
PKM-221ENST00000568743 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
PKM-221ENST00000568743 TROQ12816 1431 aaPredicted RBP15.95■□□□□ 0.14
PKM-221ENST00000568743 GLI2P10070 1586 aa15.95■□□□□ 0.14
PKM-221ENST00000568743 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
PKM-221ENST00000568743 CFAP43Q8NDM7 1665 aa15.92■□□□□ 0.14
PKM-221ENST00000568743 KIF14Q15058 1648 aa15.91■□□□□ 0.14
PKM-221ENST00000568743 MTUS2Q5JR59 1369 aa15.91■□□□□ 0.14
PKM-221ENST00000568743 APLP2Q06481 763 aa15.9■□□□□ 0.14
PKM-221ENST00000568743 CD109Q6YHK3 1445 aa15.9■□□□□ 0.14
PKM-221ENST00000568743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
PKM-221ENST00000568743 KANK4Q5T7N3 995 aaPredicted RBP15.89■□□□□ 0.13
PKM-221ENST00000568743 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
PKM-221ENST00000568743 MAP3K4Q9Y6R4 1608 aa15.89■□□□□ 0.13
PKM-221ENST00000568743 TTC37Q6PGP7 1564 aa15.88■□□□□ 0.13
PKM-221ENST00000568743 TSPOAP1O95153 1857 aa15.88■□□□□ 0.13
PKM-221ENST00000568743 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
PKM-221ENST00000568743 LRRC9Q6ZRR7 1453 aa15.86■□□□□ 0.13
PKM-221ENST00000568743 MAP3K1Q13233 1512 aa15.86■□□□□ 0.13
PKM-221ENST00000568743 PPRC1Q5VV67 1664 aaKnown RBP15.84■□□□□ 0.13
PKM-221ENST00000568743 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
PKM-221ENST00000568743 TEX14Q8IWB6 1497 aa15.8■□□□□ 0.12
PKM-221ENST00000568743 NCOA2Q15596 1464 aa15.79■□□□□ 0.12
PKM-221ENST00000568743 PLCH2O75038 1416 aa15.79■□□□□ 0.12
PKM-221ENST00000568743 CCNB3Q8WWL7 1395 aa15.78■□□□□ 0.12
PKM-221ENST00000568743 SUPT6HQ7KZ85 1726 aaKnown RBP15.77■□□□□ 0.12
PKM-221ENST00000568743 ARHGAP5Q13017 1502 aa15.77■□□□□ 0.11
PKM-221ENST00000568743 FANCAO15360 1455 aa15.77■□□□□ 0.11
PKM-221ENST00000568743 MYO5CQ9NQX4 1742 aa15.77■□□□□ 0.11
PKM-221ENST00000568743 GPATCH8Q9UKJ3 1502 aaKnown RBP15.76■□□□□ 0.11
PKM-221ENST00000568743 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
PKM-221ENST00000568743 PREX2Q70Z35 1606 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms