RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 RUSC2Q8N2Y8 1516 aa21.09■□□□□ 0.97
GTF3C1-209ENST00000568569 ABCC10Q5T3U5 1492 aa21.09■□□□□ 0.97
GTF3C1-209ENST00000568569 NPM1P06748 294 aaKnown RBP eCLIP21.09■□□□□ 0.97
GTF3C1-209ENST00000568569 FAM69CQ0P6D2 419 aa21.09■□□□□ 0.97
GTF3C1-209ENST00000568569 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
GTF3C1-209ENST00000568569 DIP2BQ9P265 1576 aa20.99■□□□□ 0.95
GTF3C1-209ENST00000568569 ADCY10Q96PN6 1610 aa20.98■□□□□ 0.95
GTF3C1-209ENST00000568569 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
GTF3C1-209ENST00000568569 IGF1RP08069 1367 aa20.94■□□□□ 0.94
GTF3C1-209ENST00000568569 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
GTF3C1-209ENST00000568569 KDM6BO15054 1643 aa20.89■□□□□ 0.94
GTF3C1-209ENST00000568569 CUL7Q14999 1698 aa20.86■□□□□ 0.93
GTF3C1-209ENST00000568569 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
GTF3C1-209ENST00000568569 PTPRGP23470 1445 aa20.86■□□□□ 0.93
GTF3C1-209ENST00000568569 CARMIL1Q5VZK9 1371 aa20.8■□□□□ 0.92
GTF3C1-209ENST00000568569 TNIKQ9UKE5 1360 aa20.8■□□□□ 0.92
GTF3C1-209ENST00000568569 CARMIL2Q6F5E8 1435 aa20.79■□□□□ 0.92
GTF3C1-209ENST00000568569 ABCC2Q92887 1545 aa20.79■□□□□ 0.92
GTF3C1-209ENST00000568569 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
GTF3C1-209ENST00000568569 TSPOAP1O95153 1857 aa20.77■□□□□ 0.92
GTF3C1-209ENST00000568569 ASXL2Q76L83 1435 aa20.75■□□□□ 0.91
GTF3C1-209ENST00000568569 PLB1Q6P1J6 1458 aa20.75■□□□□ 0.91
GTF3C1-209ENST00000568569 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
GTF3C1-209ENST00000568569 GLI2P10070 1586 aa20.7■□□□□ 0.9
GTF3C1-209ENST00000568569 IQGAP2Q13576 1575 aa20.7■□□□□ 0.9
GTF3C1-209ENST00000568569 UACAQ9BZF9 1416 aa20.69■□□□□ 0.9
GTF3C1-209ENST00000568569 DISP1Q96F81 1524 aa20.64■□□□□ 0.9
GTF3C1-209ENST00000568569 PPRC1Q5VV67 1664 aaKnown RBP20.64■□□□□ 0.89
GTF3C1-209ENST00000568569 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
GTF3C1-209ENST00000568569 ADGRL1O94910 1474 aa20.62■□□□□ 0.89
GTF3C1-209ENST00000568569 EPRSP07814 1512 aaKnown RBP20.61■□□□□ 0.89
GTF3C1-209ENST00000568569 UGGT2Q9NYU1 1516 aa20.58■□□□□ 0.89
GTF3C1-209ENST00000568569 TEX14Q8IWB6 1497 aa20.58■□□□□ 0.89
GTF3C1-209ENST00000568569 COL17A1Q9UMD9 1497 aaPredicted RBP20.58■□□□□ 0.89
GTF3C1-209ENST00000568569 ILDR1Q86SU0 546 aaPredicted RBP20.56■□□□□ 0.88
GTF3C1-209ENST00000568569 RAPGEF2Q9Y4G8 1499 aa20.56■□□□□ 0.88
GTF3C1-209ENST00000568569 MAP3K4Q9Y6R4 1608 aa20.55■□□□□ 0.88
GTF3C1-209ENST00000568569 KIAA0556O60303 1618 aa20.52■□□□□ 0.88
GTF3C1-209ENST00000568569 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
GTF3C1-209ENST00000568569 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
GTF3C1-209ENST00000568569 HECW2Q9P2P5 1572 aa20.42■□□□□ 0.86
GTF3C1-209ENST00000568569 CD109Q6YHK3 1445 aa20.41■□□□□ 0.86
GTF3C1-209ENST00000568569 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
GTF3C1-209ENST00000568569 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
GTF3C1-209ENST00000568569 KCNH8Q96L42 1107 aa20.36■□□□□ 0.85
GTF3C1-209ENST00000568569 ABCA8O94911 1581 aa20.35■□□□□ 0.85
GTF3C1-209ENST00000568569 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.85
GTF3C1-209ENST00000568569 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
GTF3C1-209ENST00000568569 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
GTF3C1-209ENST00000568569 FAM9AQ8IZU1 332 aaPredicted RBP20.25■□□□□ 0.83
GTF3C1-209ENST00000568569 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
GTF3C1-209ENST00000568569 KIF21BO75037 1637 aa20.21■□□□□ 0.83
GTF3C1-209ENST00000568569 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
GTF3C1-209ENST00000568569 PHLDB1Q86UU1 1377 aa20.21■□□□□ 0.83
GTF3C1-209ENST00000568569 ATP10BO94823 1461 aa20.2■□□□□ 0.82
GTF3C1-209ENST00000568569 P3H3Q8IVL6 736 aa20.16■□□□□ 0.82
GTF3C1-209ENST00000568569 ABCA9Q8IUA7 1624 aa20.13■□□□□ 0.81
GTF3C1-209ENST00000568569 PTPRMP28827 1452 aa20.12■□□□□ 0.81
GTF3C1-209ENST00000568569 RAPGEF3O95398 923 aa20.12■□□□□ 0.81
GTF3C1-209ENST00000568569 NEO1Q92859 1461 aa20.11■□□□□ 0.81
GTF3C1-209ENST00000568569 FBXO41Q8TF61 875 aa20.11■□□□□ 0.81
GTF3C1-209ENST00000568569 ADAMTSL3P82987 1691 aa20.08■□□□□ 0.81
GTF3C1-209ENST00000568569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
GTF3C1-209ENST00000568569 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
GTF3C1-209ENST00000568569 SAMD9Q5K651 1589 aa20.06■□□□□ 0.8
GTF3C1-209ENST00000568569 RAPGEF6Q8TEU7 1601 aa20.05■□□□□ 0.8
GTF3C1-209ENST00000568569 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
GTF3C1-209ENST00000568569 CSRNP3Q8WYN3 585 aa20.03■□□□□ 0.8
GTF3C1-209ENST00000568569 FRMPD1Q5SYB0 1578 aa20.03■□□□□ 0.8
GTF3C1-209ENST00000568569 NUP153P49790 1475 aaKnown RBP20.02■□□□□ 0.8
GTF3C1-209ENST00000568569 PCF11O94913 1555 aaKnown RBP20■□□□□ 0.79
GTF3C1-209ENST00000568569 BCORL1Q5H9F3 1711 aa20■□□□□ 0.79
GTF3C1-209ENST00000568569 MADDQ8WXG6 1647 aa19.98■□□□□ 0.79
GTF3C1-209ENST00000568569 DENND4BO75064 1496 aaPredicted RBP19.98■□□□□ 0.79
GTF3C1-209ENST00000568569 LMTK3Q96Q04 1460 aa19.98■□□□□ 0.79
GTF3C1-209ENST00000568569 ARHGEF40Q8TER5 1519 aa19.97■□□□□ 0.79
GTF3C1-209ENST00000568569 PLEKHD1A6NEE1 506 aa19.96■□□□□ 0.79
GTF3C1-209ENST00000568569 FHOD3Q2V2M9 1422 aa19.95■□□□□ 0.78
GTF3C1-209ENST00000568569 AKNAQ7Z591 1439 aa19.93■□□□□ 0.78
GTF3C1-209ENST00000568569 FANCAO15360 1455 aa19.93■□□□□ 0.78
GTF3C1-209ENST00000568569 RANGAP1P46060 587 aaPredicted RBP19.92■□□□□ 0.78
GTF3C1-209ENST00000568569 POGZQ7Z3K3 1410 aa19.91■□□□□ 0.78
GTF3C1-209ENST00000568569 EEA1Q15075 1411 aa19.9■□□□□ 0.78
GTF3C1-209ENST00000568569 RICTORQ6R327 1708 aa19.89■□□□□ 0.77
GTF3C1-209ENST00000568569 CFAP74Q9C0B2 1584 aa19.89■□□□□ 0.77
GTF3C1-209ENST00000568569 ZMYM4Q5VZL5 1548 aa19.88■□□□□ 0.77
GTF3C1-209ENST00000568569 RIMS1Q86UR5 1692 aaKnown RBP19.87■□□□□ 0.77
GTF3C1-209ENST00000568569 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.87■□□□□ 0.77
GTF3C1-209ENST00000568569 EFCAB5A4FU69 1503 aa19.86■□□□□ 0.77
GTF3C1-209ENST00000568569 MAGI2Q86UL8 1455 aa19.86■□□□□ 0.77
GTF3C1-209ENST00000568569 YEATS2Q9ULM3 1422 aa19.85■□□□□ 0.77
GTF3C1-209ENST00000568569 HSPA2P54652 639 aa19.85■□□□□ 0.77
GTF3C1-209ENST00000568569 ZFYVE16Q7Z3T8 1539 aa19.85■□□□□ 0.77
GTF3C1-209ENST00000568569 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.77
GTF3C1-209ENST00000568569 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
GTF3C1-209ENST00000568569 MLECQ14165 292 aa19.79■□□□□ 0.76
GTF3C1-209ENST00000568569 PLCH2O75038 1416 aa19.78■□□□□ 0.76
GTF3C1-209ENST00000568569 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
GTF3C1-209ENST00000568569 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
GTF3C1-209ENST00000568569 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms