RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 CARMIL1Q5VZK9 1371 aa30.82■■■□□ 2.52
DENND4A-208ENST00000568515 PHLDB1Q86UU1 1377 aa30.82■■■□□ 2.52
DENND4A-208ENST00000568515 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
DENND4A-208ENST00000568515 SIN3AQ96ST3 1273 aa30.76■■■□□ 2.51
DENND4A-208ENST00000568515 DDX10Q13206 875 aaKnown RBP30.74■■■□□ 2.51
DENND4A-208ENST00000568515 FAM50AQ14320 339 aaKnown RBP30.74■■■□□ 2.51
DENND4A-208ENST00000568515 FHAD1B1AJZ9 1412 aa30.74■■■□□ 2.51
DENND4A-208ENST00000568515 TIMELESSQ9UNS1 1208 aa30.7■■■□□ 2.51
DENND4A-208ENST00000568515 CFAP43Q8NDM7 1665 aa30.69■■■□□ 2.5
DENND4A-208ENST00000568515 FGD5Q6ZNL6 1462 aa30.68■■■□□ 2.5
DENND4A-208ENST00000568515 PPP1R15AO75807 674 aaPredicted RBP30.66■■■□□ 2.5
DENND4A-208ENST00000568515 CADPSQ9ULU8 1353 aa30.64■■■□□ 2.5
DENND4A-208ENST00000568515 PCF11O94913 1555 aaKnown RBP30.64■■■□□ 2.49
DENND4A-208ENST00000568515 P3H3Q8IVL6 736 aa30.59■■■□□ 2.49
DENND4A-208ENST00000568515 FKBP8Q14318 412 aa30.57■■■□□ 2.48
DENND4A-208ENST00000568515 ATP1B4Q9UN42 357 aaPredicted RBP30.56■■■□□ 2.48
DENND4A-208ENST00000568515 BCANQ96GW7 911 aa30.56■■■□□ 2.48
DENND4A-208ENST00000568515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.53■■■□□ 2.486e-7■■■■■ 31.9
DENND4A-208ENST00000568515 CCER2I3L3R5 266 aa30.52■■■□□ 2.48
DENND4A-208ENST00000568515 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
DENND4A-208ENST00000568515 FHOD3Q2V2M9 1422 aa30.5■■■□□ 2.47
DENND4A-208ENST00000568515 ANP32EQ9BTT0 268 aa30.49■■■□□ 2.47
DENND4A-208ENST00000568515 HIRIP3Q9BW71 556 aaPredicted RBP30.49■■■□□ 2.47
DENND4A-208ENST00000568515 CASKIN1Q8WXD9 1431 aa30.46■■■□□ 2.47
DENND4A-208ENST00000568515 ANP32CO43423 234 aa30.46■■■□□ 2.47
DENND4A-208ENST00000568515 EFCAB5A4FU69 1503 aa30.44■■■□□ 2.46
DENND4A-208ENST00000568515 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.46
DENND4A-208ENST00000568515 NEFLP07196 543 aa30.41■■■□□ 2.46
DENND4A-208ENST00000568515 TRIM52Q96A61 297 aa30.37■■■□□ 2.45
DENND4A-208ENST00000568515 FGD6Q6ZV73 1430 aa30.36■■■□□ 2.45
DENND4A-208ENST00000568515 TONSLQ96HA7 1378 aa30.35■■■□□ 2.45
DENND4A-208ENST00000568515 FANCD2Q9BXW9 1451 aa30.34■■■□□ 2.45
DENND4A-208ENST00000568515 ABCA10Q8WWZ4 1543 aa30.33■■■□□ 2.45
DENND4A-208ENST00000568515 RAD54L2Q9Y4B4 1467 aa30.32■■■□□ 2.44
DENND4A-208ENST00000568515 CCDC18Q5T9S5 1454 aa30.32■■■□□ 2.44
DENND4A-208ENST00000568515 FMN1Q68DA7 1419 aa30.29■■■□□ 2.44
DENND4A-208ENST00000568515 DNMBPQ6XZF7 1577 aa30.28■■■□□ 2.44
DENND4A-208ENST00000568515 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
DENND4A-208ENST00000568515 UACAQ9BZF9 1416 aa30.28■■■□□ 2.44
DENND4A-208ENST00000568515 HFM1A2PYH4 1435 aa30.27■■■□□ 2.44
DENND4A-208ENST00000568515 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
DENND4A-208ENST00000568515 CUL7Q14999 1698 aa30.26■■■□□ 2.44
DENND4A-208ENST00000568515 PTPRKQ15262 1439 aa30.24■■■□□ 2.43
DENND4A-208ENST00000568515 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
DENND4A-208ENST00000568515 SNAPC4Q5SXM2 1469 aa30.23■■■□□ 2.43
DENND4A-208ENST00000568515 MTUS2Q5JR59 1369 aa30.23■■■□□ 2.43
DENND4A-208ENST00000568515 PTPN23Q9H3S7 1636 aa30.22■■■□□ 2.43
DENND4A-208ENST00000568515 RBM19Q9Y4C8 960 aaKnown RBP30.21■■■□□ 2.43
DENND4A-208ENST00000568515 TOPBP1Q92547 1522 aa30.2■■■□□ 2.43
DENND4A-208ENST00000568515 NAIPQ13075 1403 aa30.16■■■□□ 2.42
DENND4A-208ENST00000568515 MYOM3Q5VTT5 1437 aa30.11■■■□□ 2.41
DENND4A-208ENST00000568515 NCOA2Q15596 1464 aa30.11■■■□□ 2.41
DENND4A-208ENST00000568515 KDM5BQ9UGL1 1544 aa30.09■■■□□ 2.41
DENND4A-208ENST00000568515 LRRIQ1Q96JM4 1722 aa30.08■■■□□ 2.41
DENND4A-208ENST00000568515 SAMD9Q5K651 1589 aa30.06■■■□□ 2.4
DENND4A-208ENST00000568515 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
DENND4A-208ENST00000568515 SUPT6HQ7KZ85 1726 aaKnown RBP30.03■■■□□ 2.4
DENND4A-208ENST00000568515 HNRNPUQ00839 825 aaKnown RBP eCLIP30.02■■■□□ 2.4
DENND4A-208ENST00000568515 THOC2Q8NI27 1593 aaKnown RBP30■■■□□ 2.39
DENND4A-208ENST00000568515 EHBP1L1Q8N3D4 1523 aa29.99■■■□□ 2.39
DENND4A-208ENST00000568515 NESP48681 1621 aa29.97■■■□□ 2.39
DENND4A-208ENST00000568515 WASHC2AQ641Q2 1341 aa29.95■■■□□ 2.39
DENND4A-208ENST00000568515 HSPA5P11021 654 aaKnown RBP29.95■■■□□ 2.39
DENND4A-208ENST00000568515 UGGT2Q9NYU1 1516 aa29.94■■■□□ 2.38
DENND4A-208ENST00000568515 RRP7BPQ9NSQ0 103 aa29.91■■■□□ 2.38
DENND4A-208ENST00000568515 ARHGEF11O15085 1522 aa29.91■■■□□ 2.38
DENND4A-208ENST00000568515 TDRD9Q8NDG6 1382 aaKnown RBP29.9■■■□□ 2.38
DENND4A-208ENST00000568515 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
DENND4A-208ENST00000568515 URB2Q14146 1524 aaKnown RBP29.88■■■□□ 2.37
DENND4A-208ENST00000568515 DENND4BO75064 1496 aaPredicted RBP29.87■■■□□ 2.37
DENND4A-208ENST00000568515 TCOF1Q13428 1488 aaKnown RBP29.86■■■□□ 2.37
DENND4A-208ENST00000568515 HECW1Q76N89 1606 aa29.86■■■□□ 2.37
DENND4A-208ENST00000568515 EIF4G2P78344 907 aaKnown RBP eCLIP29.86■■■□□ 2.37
DENND4A-208ENST00000568515 CHIC2Q9UKJ5 165 aa29.86■■■□□ 2.37
DENND4A-208ENST00000568515 GAPVD1Q14C86 1478 aa29.86■■■□□ 2.37
DENND4A-208ENST00000568515 GCC2Q8IWJ2 1684 aa29.86■■■□□ 2.37
DENND4A-208ENST00000568515 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
DENND4A-208ENST00000568515 IRX6P78412 446 aaPredicted RBP29.84■■■□□ 2.37
DENND4A-208ENST00000568515 CDK11AQ9UQ88 783 aaPredicted RBP29.82■■■□□ 2.36
DENND4A-208ENST00000568515 AKNAQ7Z591 1439 aa29.81■■■□□ 2.36
DENND4A-208ENST00000568515 MSH5O43196 834 aa29.81■■■□□ 2.36
DENND4A-208ENST00000568515 CNTLNQ9NXG0 1405 aa29.81■■■□□ 2.36
DENND4A-208ENST00000568515 KIF21AQ7Z4S6 1674 aa29.81■■■□□ 2.36
DENND4A-208ENST00000568515 ERICH6BQ5W0A0 696 aa29.79■■■□□ 2.36
DENND4A-208ENST00000568515 FANCIQ9NVI1 1328 aa29.77■■■□□ 2.36
DENND4A-208ENST00000568515 MPHOSPH9Q99550 1183 aa29.77■■■□□ 2.36
DENND4A-208ENST00000568515 KDM6BO15054 1643 aa29.76■■■□□ 2.36
DENND4A-208ENST00000568515 CCDC184Q52MB2 194 aa29.75■■■□□ 2.35
DENND4A-208ENST00000568515 L3MBTL2Q969R5 705 aa29.74■■■□□ 2.35
DENND4A-208ENST00000568515 LAMC3Q9Y6N6 1575 aa29.73■■■□□ 2.35
DENND4A-208ENST00000568515 BCL11AQ9H165 835 aa29.71■■■□□ 2.35
DENND4A-208ENST00000568515 NCOA1Q15788 1441 aa29.7■■■□□ 2.35
DENND4A-208ENST00000568515 CCDC7Q96M83 1385 aa29.7■■■□□ 2.35
DENND4A-208ENST00000568515 C11orf95C9JLR9 678 aaPredicted RBP29.7■■■□□ 2.34
DENND4A-208ENST00000568515 PPP4R2Q9NY27 417 aa29.7■■■□□ 2.34
DENND4A-208ENST00000568515 PRKRIP1Q9H875 184 aaPredicted RBP29.69■■■□□ 2.34
DENND4A-208ENST00000568515 MIA2Q96PC5 1412 aa29.69■■■□□ 2.34
DENND4A-208ENST00000568515 EPRSP07814 1512 aaKnown RBP29.66■■■□□ 2.34
DENND4A-208ENST00000568515 FOXD1Q16676 465 aa29.64■■■□□ 2.34
DENND4A-208ENST00000568515 FAM9BQ8IZU0 186 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms