RNA–Protein interactions for RNA: ENST00000568190.1

SIN3A-209, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-209ENST00000568190 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
SIN3A-209ENST00000568190 ARHGEF11O15085 1522 aa13.82□□□□□ -0.2
SIN3A-209ENST00000568190 RIMBP3CA6NJZ7 1639 aa13.82□□□□□ -0.2
SIN3A-209ENST00000568190 RIMBP3BA6NNM3 1639 aa13.82□□□□□ -0.2
SIN3A-209ENST00000568190 RIMBP3Q9UFD9 1639 aa13.82□□□□□ -0.2
SIN3A-209ENST00000568190 IQGAP2Q13576 1575 aa13.81□□□□□ -0.2
SIN3A-209ENST00000568190 UGGT2Q9NYU1 1516 aa13.74□□□□□ -0.21
SIN3A-209ENST00000568190 ERCC6L2Q5T890 1561 aa13.72□□□□□ -0.21
SIN3A-209ENST00000568190 GOLGA3Q08378 1498 aa13.72□□□□□ -0.21
SIN3A-209ENST00000568190 JPH4Q96JJ6 628 aa13.71□□□□□ -0.21
SIN3A-209ENST00000568190 ARAP1Q96P48 1450 aa13.71□□□□□ -0.21
SIN3A-209ENST00000568190 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.22
SIN3A-209ENST00000568190 FAM9AQ8IZU1 332 aaPredicted RBP13.7□□□□□ -0.22
SIN3A-209ENST00000568190 DISP1Q96F81 1524 aa13.68□□□□□ -0.22
SIN3A-209ENST00000568190 KIAA0556O60303 1618 aa13.68□□□□□ -0.22
SIN3A-209ENST00000568190 SAMD9Q5K651 1589 aa13.66□□□□□ -0.22
SIN3A-209ENST00000568190 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
SIN3A-209ENST00000568190 EFCAB5A4FU69 1503 aa13.62□□□□□ -0.23
SIN3A-209ENST00000568190 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
SIN3A-209ENST00000568190 ADCY10Q96PN6 1610 aa13.56□□□□□ -0.24
SIN3A-209ENST00000568190 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
SIN3A-209ENST00000568190 PTPRGP23470 1445 aa13.55□□□□□ -0.24
SIN3A-209ENST00000568190 UBTFP17480 764 aaKnown RBP13.54□□□□□ -0.24
SIN3A-209ENST00000568190 UHRF1BP1LA0JNW5 1464 aa13.54□□□□□ -0.24
SIN3A-209ENST00000568190 ABCC2Q92887 1545 aa13.52□□□□□ -0.25
SIN3A-209ENST00000568190 ABCA8O94911 1581 aa13.51□□□□□ -0.25
SIN3A-209ENST00000568190 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
SIN3A-209ENST00000568190 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
SIN3A-209ENST00000568190 FHOD3Q2V2M9 1422 aa13.47□□□□□ -0.25
SIN3A-209ENST00000568190 RAPGEF6Q8TEU7 1601 aa13.46□□□□□ -0.25
SIN3A-209ENST00000568190 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
SIN3A-209ENST00000568190 KDM5BQ9UGL1 1544 aa13.46□□□□□ -0.25
SIN3A-209ENST00000568190 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
SIN3A-209ENST00000568190 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
SIN3A-209ENST00000568190 CLIP1P30622 1438 aa13.45□□□□□ -0.26
SIN3A-209ENST00000568190 ZCCHC11Q5TAX3 1644 aaKnown RBP13.44□□□□□ -0.26
SIN3A-209ENST00000568190 FMN1Q68DA7 1419 aa13.44□□□□□ -0.26
SIN3A-209ENST00000568190 CEP162Q5TB80 1403 aa13.43□□□□□ -0.26
SIN3A-209ENST00000568190 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
SIN3A-209ENST00000568190 NUP153P49790 1475 aaKnown RBP13.4□□□□□ -0.26
SIN3A-209ENST00000568190 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
SIN3A-209ENST00000568190 KIF13AQ9H1H9 1805 aa13.39□□□□□ -0.27
SIN3A-209ENST00000568190 LOC105371045A0A1W2PR82 267 aa13.38□□□□□ -0.27
SIN3A-209ENST00000568190 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
SIN3A-209ENST00000568190 TTBK1Q5TCY1 1321 aaPredicted RBP13.37□□□□□ -0.27
SIN3A-209ENST00000568190 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
SIN3A-209ENST00000568190 FYCO1Q9BQS8 1478 aa13.36□□□□□ -0.27
SIN3A-209ENST00000568190 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
SIN3A-209ENST00000568190 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
SIN3A-209ENST00000568190 NPM1P06748 294 aaKnown RBP eCLIP13.35□□□□□ -0.27
SIN3A-209ENST00000568190 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
SIN3A-209ENST00000568190 ATP10BO94823 1461 aa13.35□□□□□ -0.27
SIN3A-209ENST00000568190 ASXL2Q76L83 1435 aa13.34□□□□□ -0.27
SIN3A-209ENST00000568190 ABCC10Q5T3U5 1492 aa13.33□□□□□ -0.28
SIN3A-209ENST00000568190 WDR7Q9Y4E6 1490 aa13.33□□□□□ -0.28
SIN3A-209ENST00000568190 GLI2P10070 1586 aa13.32□□□□□ -0.28
SIN3A-209ENST00000568190 EPRSP07814 1512 aaKnown RBP13.32□□□□□ -0.28
SIN3A-209ENST00000568190 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
SIN3A-209ENST00000568190 CDK13Q14004 1512 aaKnown RBP13.29□□□□□ -0.28
SIN3A-209ENST00000568190 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
SIN3A-209ENST00000568190 MAP3K4Q9Y6R4 1608 aa13.28□□□□□ -0.28
SIN3A-209ENST00000568190 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
SIN3A-209ENST00000568190 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
SIN3A-209ENST00000568190 PPRC1Q5VV67 1664 aaKnown RBP13.23□□□□□ -0.29
SIN3A-209ENST00000568190 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
SIN3A-209ENST00000568190 KIF14Q15058 1648 aa13.21□□□□□ -0.3
SIN3A-209ENST00000568190 TIAM1Q13009 1591 aa13.2□□□□□ -0.3
SIN3A-209ENST00000568190 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-209ENST00000568190 TSPOAP1O95153 1857 aa13.2□□□□□ -0.3
SIN3A-209ENST00000568190 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-209ENST00000568190 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
SIN3A-209ENST00000568190 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
SIN3A-209ENST00000568190 FAM69CQ0P6D2 419 aa13.19□□□□□ -0.3
SIN3A-209ENST00000568190 CDK11AQ9UQ88 783 aaPredicted RBP13.19□□□□□ -0.3
SIN3A-209ENST00000568190 PLEKHD1A6NEE1 506 aa13.18□□□□□ -0.3
SIN3A-209ENST00000568190 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
SIN3A-209ENST00000568190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.18□□□□□ -0.38e-8■■■□□ 18.8
SIN3A-209ENST00000568190 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
SIN3A-209ENST00000568190 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
SIN3A-209ENST00000568190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
SIN3A-209ENST00000568190 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
SIN3A-209ENST00000568190 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
SIN3A-209ENST00000568190 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
SIN3A-209ENST00000568190 ATP1B4Q9UN42 357 aaPredicted RBP13.15□□□□□ -0.3
SIN3A-209ENST00000568190 CFAP74Q9C0B2 1584 aa13.14□□□□□ -0.31
SIN3A-209ENST00000568190 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
SIN3A-209ENST00000568190 CDC42BPAQ5VT25 1732 aa13.13□□□□□ -0.31
SIN3A-209ENST00000568190 PREX2Q70Z35 1606 aa13.13□□□□□ -0.31
SIN3A-209ENST00000568190 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
SIN3A-209ENST00000568190 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
SIN3A-209ENST00000568190 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
SIN3A-209ENST00000568190 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
SIN3A-209ENST00000568190 NEO1Q92859 1461 aa13.1□□□□□ -0.31
SIN3A-209ENST00000568190 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
SIN3A-209ENST00000568190 ITSN2Q9NZM3 1697 aa13.09□□□□□ -0.31
SIN3A-209ENST00000568190 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.31
SIN3A-209ENST00000568190 PLCH2O75038 1416 aa13.08□□□□□ -0.32
SIN3A-209ENST00000568190 KDM6BO15054 1643 aa13.07□□□□□ -0.32
SIN3A-209ENST00000568190 FANCAO15360 1455 aa13.05□□□□□ -0.32
SIN3A-209ENST00000568190 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms