RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CUL7Q14999 1698 aa8.35□□□□□ -1.07
LINC01541-202ENST00000568095 RAD54L2Q9Y4B4 1467 aa8.34□□□□□ -1.07
LINC01541-202ENST00000568095 CENPBP07199 599 aaPredicted RBP8.34□□□□□ -1.07
LINC01541-202ENST00000568095 KIF27Q86VH2 1401 aa8.32□□□□□ -1.08
LINC01541-202ENST00000568095 GOLGA3Q08378 1498 aa8.31□□□□□ -1.08
LINC01541-202ENST00000568095 RAPGEF2Q9Y4G8 1499 aa8.31□□□□□ -1.08
LINC01541-202ENST00000568095 EIF4G3O43432 1585 aaKnown RBP8.3□□□□□ -1.08
LINC01541-202ENST00000568095 IFT140Q96RY7 1462 aa8.29□□□□□ -1.08
LINC01541-202ENST00000568095 DIEXFQ68CQ4 756 aaKnown RBP8.29□□□□□ -1.08
LINC01541-202ENST00000568095 IGF1RP08069 1367 aa8.29□□□□□ -1.08
LINC01541-202ENST00000568095 CTTNBP2Q8WZ74 1663 aa8.29□□□□□ -1.08
LINC01541-202ENST00000568095 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
LINC01541-202ENST00000568095 TNIKQ9UKE5 1360 aa8.28□□□□□ -1.08
LINC01541-202ENST00000568095 ERCC6Q03468 1493 aa8.26□□□□□ -1.09
LINC01541-202ENST00000568095 GAPVD1Q14C86 1478 aa8.25□□□□□ -1.09
LINC01541-202ENST00000568095 ZBTB22O15209 634 aa8.24□□□□□ -1.09
LINC01541-202ENST00000568095 ZNF608Q9ULD9 1512 aaPredicted RBP8.24□□□□□ -1.09
LINC01541-202ENST00000568095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.22□□□□□ -1.09
LINC01541-202ENST00000568095 CEP162Q5TB80 1403 aa8.22□□□□□ -1.09
LINC01541-202ENST00000568095 FAM9AQ8IZU1 332 aaPredicted RBP8.21□□□□□ -1.09
LINC01541-202ENST00000568095 CCER1Q8TC90 406 aaPredicted RBP8.21□□□□□ -1.1
LINC01541-202ENST00000568095 GRIN2BQ13224 1484 aa8.2□□□□□ -1.1
LINC01541-202ENST00000568095 SAMD9Q5K651 1589 aa8.2□□□□□ -1.1
LINC01541-202ENST00000568095 CARMIL1Q5VZK9 1371 aa8.19□□□□□ -1.1
LINC01541-202ENST00000568095 TTBK1Q5TCY1 1321 aaPredicted RBP8.19□□□□□ -1.1
LINC01541-202ENST00000568095 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
LINC01541-202ENST00000568095 PPP4R3CPQ6ZMV5 832 aa8.18□□□□□ -1.1
LINC01541-202ENST00000568095 AQRO60306 1485 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC01541-202ENST00000568095 ARAP1Q96P48 1450 aa8.18□□□□□ -1.1
LINC01541-202ENST00000568095 TDRD9Q8NDG6 1382 aaKnown RBP8.18□□□□□ -1.1
LINC01541-202ENST00000568095 MAGI1Q96QZ7 1491 aaPredicted RBP8.18□□□□□ -1.1
LINC01541-202ENST00000568095 ZNF316A6NFI3 1004 aaPredicted RBP8.17□□□□□ -1.1
LINC01541-202ENST00000568095 FHAD1B1AJZ9 1412 aa8.17□□□□□ -1.1
LINC01541-202ENST00000568095 ARHGAP35Q9NRY4 1499 aa8.16□□□□□ -1.1
LINC01541-202ENST00000568095 SNAPC4Q5SXM2 1469 aa8.16□□□□□ -1.1
LINC01541-202ENST00000568095 EFCAB5A4FU69 1503 aa8.15□□□□□ -1.1
LINC01541-202ENST00000568095 CEP170Q5SW79 1584 aa8.15□□□□□ -1.11
LINC01541-202ENST00000568095 PRKCSHP14314 528 aaPredicted RBP8.15□□□□□ -1.11
LINC01541-202ENST00000568095 CHD1O14646 1710 aa8.14□□□□□ -1.11
LINC01541-202ENST00000568095 LRRIQ1Q96JM4 1722 aa8.14□□□□□ -1.11
LINC01541-202ENST00000568095 GRIN2AQ12879 1464 aa8.13□□□□□ -1.11
LINC01541-202ENST00000568095 CLSPNQ9HAW4 1339 aa8.13□□□□□ -1.11
LINC01541-202ENST00000568095 SYNJ2O15056 1496 aa8.13□□□□□ -1.11
LINC01541-202ENST00000568095 CLIP1P30622 1438 aa8.13□□□□□ -1.11
LINC01541-202ENST00000568095 UGGT2Q9NYU1 1516 aa8.12□□□□□ -1.11
LINC01541-202ENST00000568095 IQGAP2Q13576 1575 aa8.12□□□□□ -1.11
LINC01541-202ENST00000568095 NUP160Q12769 1436 aa8.12□□□□□ -1.11
LINC01541-202ENST00000568095 CFAP43Q8NDM7 1665 aa8.11□□□□□ -1.11
LINC01541-202ENST00000568095 SHROOM2Q13796 1616 aa8.11□□□□□ -1.11
LINC01541-202ENST00000568095 VPS8Q8N3P4 1428 aa8.11□□□□□ -1.11
LINC01541-202ENST00000568095 NPM3O75607 178 aaKnown RBP8.09□□□□□ -1.11
LINC01541-202ENST00000568095 BCANQ96GW7 911 aa8.09□□□□□ -1.11
LINC01541-202ENST00000568095 PCF11O94913 1555 aaKnown RBP8.08□□□□□ -1.12
LINC01541-202ENST00000568095 KIAA0556O60303 1618 aa8.08□□□□□ -1.12
LINC01541-202ENST00000568095 MIER1Q8N108 512 aa8.08□□□□□ -1.12
LINC01541-202ENST00000568095 MAP3K1Q13233 1512 aa8.07□□□□□ -1.12
LINC01541-202ENST00000568095 KIAA0586Q9BVV6 1533 aa8.07□□□□□ -1.12
LINC01541-202ENST00000568095 CLASP1Q7Z460 1538 aa8.07□□□□□ -1.12
LINC01541-202ENST00000568095 DISP1Q96F81 1524 aa8.07□□□□□ -1.12
LINC01541-202ENST00000568095 TAOK2Q9UL54 1235 aa8.05□□□□□ -1.12
LINC01541-202ENST00000568095 UBTFP17480 764 aaKnown RBP8.04□□□□□ -1.12
LINC01541-202ENST00000568095 FYCO1Q9BQS8 1478 aa8.03□□□□□ -1.12
LINC01541-202ENST00000568095 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
LINC01541-202ENST00000568095 ANP32EQ9BTT0 268 aa8.03□□□□□ -1.12
LINC01541-202ENST00000568095 TIAM1Q13009 1591 aa8.03□□□□□ -1.12
LINC01541-202ENST00000568095 FKBP8Q14318 412 aa8.01□□□□□ -1.13
LINC01541-202ENST00000568095 SUPT16HQ9Y5B9 1047 aaKnown RBP8.01□□□□□ -1.13
LINC01541-202ENST00000568095 YTHDC1Q96MU7 727 aaKnown RBP8.01□□□□□ -1.13
LINC01541-202ENST00000568095 CASKIN1Q8WXD9 1431 aa8.01□□□□□ -1.13
LINC01541-202ENST00000568095 FHOD3Q2V2M9 1422 aa8□□□□□ -1.13
LINC01541-202ENST00000568095 TSHZ2Q9NRE2 1034 aa8□□□□□ -1.13
LINC01541-202ENST00000568095 FOXD4L1Q9NU39 408 aa8□□□□□ -1.13
LINC01541-202ENST00000568095 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
LINC01541-202ENST00000568095 HECW1Q76N89 1606 aa7.98□□□□□ -1.13
LINC01541-202ENST00000568095 ABCA8O94911 1581 aa7.98□□□□□ -1.13
LINC01541-202ENST00000568095 RAPGEF6Q8TEU7 1601 aa7.97□□□□□ -1.13
LINC01541-202ENST00000568095 ARHGEF11O15085 1522 aa7.97□□□□□ -1.13
LINC01541-202ENST00000568095 ARXQ96QS3 562 aa7.97□□□□□ -1.13
LINC01541-202ENST00000568095 FMN1Q68DA7 1419 aa7.97□□□□□ -1.13
LINC01541-202ENST00000568095 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.13
LINC01541-202ENST00000568095 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.14
LINC01541-202ENST00000568095 ERCC6L2Q5T890 1561 aa7.95□□□□□ -1.14
LINC01541-202ENST00000568095 ADCY10Q96PN6 1610 aa7.95□□□□□ -1.14
LINC01541-202ENST00000568095 LRRC9Q6ZRR7 1453 aa7.95□□□□□ -1.14
LINC01541-202ENST00000568095 MAPK8IP2Q13387 824 aaPredicted RBP7.94□□□□□ -1.14
LINC01541-202ENST00000568095 NUP153P49790 1475 aaKnown RBP7.93□□□□□ -1.14
LINC01541-202ENST00000568095 CCDC18Q5T9S5 1454 aa7.93□□□□□ -1.14
LINC01541-202ENST00000568095 TPRNQ4KMQ1 711 aa7.92□□□□□ -1.14
LINC01541-202ENST00000568095 EPRSP07814 1512 aaKnown RBP7.92□□□□□ -1.14
LINC01541-202ENST00000568095 EHBP1L1Q8N3D4 1523 aa7.92□□□□□ -1.14
LINC01541-202ENST00000568095 RRBP1Q9P2E9 1410 aaKnown RBP7.91□□□□□ -1.14
LINC01541-202ENST00000568095 CHMP7Q8WUX9 453 aaPredicted RBP7.9□□□□□ -1.14
LINC01541-202ENST00000568095 SUPT6HQ7KZ85 1726 aaKnown RBP7.9□□□□□ -1.15
LINC01541-202ENST00000568095 CDK13Q14004 1512 aaKnown RBP7.89□□□□□ -1.15
LINC01541-202ENST00000568095 TIMELESSQ9UNS1 1208 aa7.88□□□□□ -1.15
LINC01541-202ENST00000568095 PLB1Q6P1J6 1458 aa7.88□□□□□ -1.15
LINC01541-202ENST00000568095 KANK4Q5T7N3 995 aaPredicted RBP7.88□□□□□ -1.15
LINC01541-202ENST00000568095 PRG4Q92954 1404 aaPredicted RBP7.88□□□□□ -1.15
LINC01541-202ENST00000568095 UHRF1BP1LA0JNW5 1464 aa7.87□□□□□ -1.15
LINC01541-202ENST00000568095 DHX57Q6P158 1386 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms