RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 NISCHQ9Y2I1 1504 aa11.88□□□□□ -0.51
LINC01541-202ENST00000568095 AEBP2Q6ZN18 517 aaPredicted RBP11.64□□□□□ -0.55
LINC01541-202ENST00000568095 CHIC1Q5VXU3 224 aa10.83□□□□□ -0.68
LINC01541-202ENST00000568095 CCDC180Q9P1Z9 1646 aa10.51□□□□□ -0.73
LINC01541-202ENST00000568095 ZCCHC6Q5VYS8 1495 aaKnown RBP10.03□□□□□ -0.8
LINC01541-202ENST00000568095 DCAF1Q9Y4B6 1507 aa9.93□□□□□ -0.82
LINC01541-202ENST00000568095 MYO15BQ96JP2 1530 aa9.83□□□□□ -0.84
LINC01541-202ENST00000568095 SENP3Q9H4L4 574 aaPredicted RBP9.83□□□□□ -0.84
LINC01541-202ENST00000568095 PHF23Q9BUL5 403 aaPredicted RBP9.76□□□□□ -0.85
LINC01541-202ENST00000568095 NACADO15069 1562 aa9.69□□□□□ -0.86
LINC01541-202ENST00000568095 ABCC9O60706 1549 aa9.68□□□□□ -0.86
LINC01541-202ENST00000568095 RB1CC1Q8TDY2 1594 aa9.57□□□□□ -0.88
LINC01541-202ENST00000568095 UNC13AQ9UPW8 1703 aa9.57□□□□□ -0.88
LINC01541-202ENST00000568095 SCRIBQ14160 1630 aa9.49□□□□□ -0.89
LINC01541-202ENST00000568095 EHMT2Q96KQ7 1210 aa9.43□□□□□ -0.9
LINC01541-202ENST00000568095 POTEDQ86YR6 584 aa9.42□□□□□ -0.9
LINC01541-202ENST00000568095 BICRAQ9NZM4 1560 aa9.4□□□□□ -0.9
LINC01541-202ENST00000568095 SLC24A1O60721 1099 aa9.4□□□□□ -0.91
LINC01541-202ENST00000568095 SHROOM4Q9ULL8 1493 aa9.4□□□□□ -0.91
LINC01541-202ENST00000568095 DCAF8L2P0C7V8 631 aa9.37□□□□□ -0.91
LINC01541-202ENST00000568095 FOXD1Q16676 465 aa9.26□□□□□ -0.93
LINC01541-202ENST00000568095 HRCP23327 699 aa9.23□□□□□ -0.93
LINC01541-202ENST00000568095 CECR2Q9BXF3 1484 aa9.18□□□□□ -0.94
LINC01541-202ENST00000568095 SMARCA4P51532 1647 aa9.18□□□□□ -0.94
LINC01541-202ENST00000568095 PLPPR3Q6T4P5 718 aa9.17□□□□□ -0.94
LINC01541-202ENST00000568095 RSF1Q96T23 1441 aaPredicted RBP9.16□□□□□ -0.94
LINC01541-202ENST00000568095 MROH2BQ7Z745 1585 aa9.16□□□□□ -0.94
LINC01541-202ENST00000568095 BAZ1AQ9NRL2 1556 aaPredicted RBP9.16□□□□□ -0.94
LINC01541-202ENST00000568095 PEG3Q9GZU2 1588 aa9.16□□□□□ -0.94
LINC01541-202ENST00000568095 WIZO95785 1651 aa9.11□□□□□ -0.95
LINC01541-202ENST00000568095 EIF4G1Q04637 1599 aaKnown RBP9.04□□□□□ -0.96
LINC01541-202ENST00000568095 TOP2AP11388 1531 aaKnown RBP9.03□□□□□ -0.96
LINC01541-202ENST00000568095 PABPN1Q86U42 306 aaKnown RBP eCLIP9.02□□□□□ -0.96
LINC01541-202ENST00000568095 PELP1Q8IZL8 1130 aaKnown RBP8.99□□□□□ -0.97
LINC01541-202ENST00000568095 SMARCA2P51531 1590 aa8.97□□□□□ -0.97
LINC01541-202ENST00000568095 ATAD2BQ9ULI0 1458 aa8.97□□□□□ -0.97
LINC01541-202ENST00000568095 HMGXB3Q12766 1538 aa8.97□□□□□ -0.97
LINC01541-202ENST00000568095 KCNA4P22459 653 aa8.95□□□□□ -0.98
LINC01541-202ENST00000568095 SUPT5HO00267 1087 aaKnown RBP8.94□□□□□ -0.98
LINC01541-202ENST00000568095 NCAPD3P42695 1498 aa8.91□□□□□ -0.98
LINC01541-202ENST00000568095 CC2D2AQ9P2K1 1620 aa8.9□□□□□ -0.98
LINC01541-202ENST00000568095 PPARGC1BQ86YN6 1023 aaKnown RBP8.89□□□□□ -0.99
LINC01541-202ENST00000568095 CSRNP3Q8WYN3 585 aa8.89□□□□□ -0.99
LINC01541-202ENST00000568095 PCGF6Q9BYE7 350 aa8.88□□□□□ -0.99
LINC01541-202ENST00000568095 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
LINC01541-202ENST00000568095 BAZ1BQ9UIG0 1483 aaKnown RBP8.86□□□□□ -0.99
LINC01541-202ENST00000568095 PRDM2Q13029 1718 aa8.85□□□□□ -0.99
LINC01541-202ENST00000568095 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
LINC01541-202ENST00000568095 AMER1Q5JTC6 1135 aaPredicted RBP8.78□□□□□ -1
LINC01541-202ENST00000568095 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
LINC01541-202ENST00000568095 CFTRP13569 1480 aa8.71□□□□□ -1.01
LINC01541-202ENST00000568095 MSH5O43196 834 aa8.71□□□□□ -1.01
LINC01541-202ENST00000568095 SCAF1Q9H7N4 1312 aaKnown RBP8.71□□□□□ -1.02
LINC01541-202ENST00000568095 ZEB1P37275 1124 aaPredicted RBP8.69□□□□□ -1.02
LINC01541-202ENST00000568095 SLC4A1APQ9BWU0 796 aaKnown RBP8.69□□□□□ -1.02
LINC01541-202ENST00000568095 BIVM-ERCC5R4GMW8 1640 aa8.68□□□□□ -1.02
LINC01541-202ENST00000568095 MYT1Q01538 1121 aa8.67□□□□□ -1.02
LINC01541-202ENST00000568095 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
LINC01541-202ENST00000568095 SYNJ1O43426 1573 aa8.65□□□□□ -1.02
LINC01541-202ENST00000568095 LAMC3Q9Y6N6 1575 aa8.64□□□□□ -1.03
LINC01541-202ENST00000568095 TOP2BQ02880 1626 aa8.63□□□□□ -1.03
LINC01541-202ENST00000568095 PPP6R1Q9UPN7 881 aa8.63□□□□□ -1.03
LINC01541-202ENST00000568095 PIAS4Q8N2W9 510 aaPredicted RBP8.62□□□□□ -1.03
LINC01541-202ENST00000568095 CADPSQ9ULU8 1353 aa8.6□□□□□ -1.03
LINC01541-202ENST00000568095 LOC105371045A0A1W2PR82 267 aa8.59□□□□□ -1.03
LINC01541-202ENST00000568095 CUX1P39880 1505 aa8.59□□□□□ -1.03
LINC01541-202ENST00000568095 KIF21AQ7Z4S6 1674 aa8.58□□□□□ -1.04
LINC01541-202ENST00000568095 ADRA2BP18089 450 aa8.58□□□□□ -1.04
LINC01541-202ENST00000568095 DNAJC5BQ9UF47 199 aa8.57□□□□□ -1.04
LINC01541-202ENST00000568095 WRNQ14191 1432 aaPredicted RBP eCLIP8.56□□□□□ -1.04
LINC01541-202ENST00000568095 NESP48681 1621 aa8.56□□□□□ -1.04
LINC01541-202ENST00000568095 WDR97A6NE52 1622 aa8.55□□□□□ -1.04
LINC01541-202ENST00000568095 DNMBPQ6XZF7 1577 aa8.52□□□□□ -1.04
LINC01541-202ENST00000568095 FANCD2Q9BXW9 1451 aa8.52□□□□□ -1.04
LINC01541-202ENST00000568095 ACIN1Q9UKV3 1341 aaKnown RBP8.5□□□□□ -1.05
LINC01541-202ENST00000568095 URB2Q14146 1524 aaKnown RBP8.49□□□□□ -1.05
LINC01541-202ENST00000568095 THOC2Q8NI27 1593 aaKnown RBP8.48□□□□□ -1.05
LINC01541-202ENST00000568095 TOPBP1Q92547 1522 aa8.47□□□□□ -1.05
LINC01541-202ENST00000568095 CEP164Q9UPV0 1460 aa8.47□□□□□ -1.05
LINC01541-202ENST00000568095 WDR62O43379 1518 aa8.46□□□□□ -1.06
LINC01541-202ENST00000568095 KIF21BO75037 1637 aa8.45□□□□□ -1.06
LINC01541-202ENST00000568095 SOGA1O94964 1423 aa8.45□□□□□ -1.06
LINC01541-202ENST00000568095 TRIM41Q8WV44 630 aa8.45□□□□□ -1.06
LINC01541-202ENST00000568095 RUSC2Q8N2Y8 1516 aa8.45□□□□□ -1.06
LINC01541-202ENST00000568095 TARBP1Q13395 1621 aaKnown RBP8.45□□□□□ -1.06
LINC01541-202ENST00000568095 EEA1Q15075 1411 aa8.45□□□□□ -1.06
LINC01541-202ENST00000568095 NCBP3Q53F19 620 aaKnown RBP8.44□□□□□ -1.06
LINC01541-202ENST00000568095 PDS5BQ9NTI5 1447 aa8.44□□□□□ -1.06
LINC01541-202ENST00000568095 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
LINC01541-202ENST00000568095 FGD5Q6ZNL6 1462 aa8.44□□□□□ -1.06
LINC01541-202ENST00000568095 ABCA5Q8WWZ7 1642 aa8.43□□□□□ -1.06
LINC01541-202ENST00000568095 POLA1P09884 1462 aaPredicted RBP8.43□□□□□ -1.06
LINC01541-202ENST00000568095 ABCA10Q8WWZ4 1543 aa8.42□□□□□ -1.06
LINC01541-202ENST00000568095 MRC2Q9UBG0 1479 aa8.41□□□□□ -1.06
LINC01541-202ENST00000568095 ERICH3Q5RHP9 1530 aa8.38□□□□□ -1.07
LINC01541-202ENST00000568095 PRXQ9BXM0 1461 aa8.38□□□□□ -1.07
LINC01541-202ENST00000568095 CUX2O14529 1486 aa8.37□□□□□ -1.07
LINC01541-202ENST00000568095 PBRM1Q86U86 1689 aa8.37□□□□□ -1.07
LINC01541-202ENST00000568095 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
LINC01541-202ENST00000568095 GTF3C3Q9Y5Q9 886 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms