RNA–Protein interactions for RNA: ENST00000567745.5

THSD4-204, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 1,218 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-204ENST00000567745 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
THSD4-204ENST00000567745 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
THSD4-204ENST00000567745 OSCARQ8IYS5 282 aa23.22■■□□□ 1.31
THSD4-204ENST00000567745 KIAA0586Q9BVV6 1533 aa23.18■■□□□ 1.3
THSD4-204ENST00000567745 EHMT2Q96KQ7 1210 aa23.12■■□□□ 1.29
THSD4-204ENST00000567745 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
THSD4-204ENST00000567745 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
THSD4-204ENST00000567745 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
THSD4-204ENST00000567745 ARHGEF11O15085 1522 aa23.1■■□□□ 1.29
THSD4-204ENST00000567745 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
THSD4-204ENST00000567745 UGGT2Q9NYU1 1516 aa23.06■■□□□ 1.28
THSD4-204ENST00000567745 KIAA0556O60303 1618 aa23.04■■□□□ 1.28
THSD4-204ENST00000567745 SAMD9Q5K651 1589 aa23.01■■□□□ 1.27
THSD4-204ENST00000567745 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
THSD4-204ENST00000567745 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
THSD4-204ENST00000567745 EFCAB5A4FU69 1503 aa22.97■■□□□ 1.27
THSD4-204ENST00000567745 DISP1Q96F81 1524 aa22.96■■□□□ 1.27
THSD4-204ENST00000567745 ARAP1Q96P48 1450 aa22.93■■□□□ 1.26
THSD4-204ENST00000567745 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
THSD4-204ENST00000567745 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
THSD4-204ENST00000567745 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
THSD4-204ENST00000567745 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
THSD4-204ENST00000567745 FHOD3Q2V2M9 1422 aa22.82■■□□□ 1.24
THSD4-204ENST00000567745 CEP162Q5TB80 1403 aa22.82■■□□□ 1.24
THSD4-204ENST00000567745 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
THSD4-204ENST00000567745 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
THSD4-204ENST00000567745 CLIP1P30622 1438 aa22.79■■□□□ 1.24
THSD4-204ENST00000567745 ADCY10Q96PN6 1610 aa22.75■■□□□ 1.23
THSD4-204ENST00000567745 TTBK1Q5TCY1 1321 aaPredicted RBP22.73■■□□□ 1.23
THSD4-204ENST00000567745 PTPRGP23470 1445 aa22.73■■□□□ 1.23
THSD4-204ENST00000567745 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
THSD4-204ENST00000567745 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
THSD4-204ENST00000567745 ABCA8O94911 1581 aa22.7■■□□□ 1.22
THSD4-204ENST00000567745 PCF11O94913 1555 aaKnown RBP22.7■■□□□ 1.22
THSD4-204ENST00000567745 ABCC2Q92887 1545 aa22.69■■□□□ 1.22
THSD4-204ENST00000567745 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
THSD4-204ENST00000567745 HECW1Q76N89 1606 aa22.66■■□□□ 1.22
THSD4-204ENST00000567745 CYB5RLQ6IPT4 315 aa22.65■■□□□ 1.22
THSD4-204ENST00000567745 FMN1Q68DA7 1419 aa22.64■■□□□ 1.21
THSD4-204ENST00000567745 UACAQ9BZF9 1416 aa22.63■■□□□ 1.21
THSD4-204ENST00000567745 UHRF1BP1LA0JNW5 1464 aa22.61■■□□□ 1.21
THSD4-204ENST00000567745 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
THSD4-204ENST00000567745 LRRIQ1Q96JM4 1722 aa22.58■■□□□ 1.21
THSD4-204ENST00000567745 FYCO1Q9BQS8 1478 aa22.56■■□□□ 1.2
THSD4-204ENST00000567745 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
THSD4-204ENST00000567745 KDM5BQ9UGL1 1544 aa22.51■■□□□ 1.19
THSD4-204ENST00000567745 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
THSD4-204ENST00000567745 CASKIN1Q8WXD9 1431 aa22.49■■□□□ 1.19
THSD4-204ENST00000567745 CFAP43Q8NDM7 1665 aa22.49■■□□□ 1.19
THSD4-204ENST00000567745 CDK13Q14004 1512 aaKnown RBP22.49■■□□□ 1.19
THSD4-204ENST00000567745 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
THSD4-204ENST00000567745 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
THSD4-204ENST00000567745 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
THSD4-204ENST00000567745 EPRSP07814 1512 aaKnown RBP22.44■■□□□ 1.18
THSD4-204ENST00000567745 ARID3CA6NKF2 412 aa22.43■■□□□ 1.18
THSD4-204ENST00000567745 ATP10BO94823 1461 aa22.39■■□□□ 1.17
THSD4-204ENST00000567745 NPM1P06748 294 aaKnown RBP eCLIP22.38■■□□□ 1.17
THSD4-204ENST00000567745 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
THSD4-204ENST00000567745 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
THSD4-204ENST00000567745 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
THSD4-204ENST00000567745 DIP2BQ9P265 1576 aa22.37■■□□□ 1.17
THSD4-204ENST00000567745 KIF13AQ9H1H9 1805 aa22.36■■□□□ 1.17
THSD4-204ENST00000567745 TIAM1Q13009 1591 aa22.36■■□□□ 1.17
THSD4-204ENST00000567745 KIF14Q15058 1648 aa22.31■■□□□ 1.16
THSD4-204ENST00000567745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.3■■□□□ 1.16
THSD4-204ENST00000567745 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
THSD4-204ENST00000567745 EHBP1L1Q8N3D4 1523 aa22.29■■□□□ 1.16
THSD4-204ENST00000567745 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
THSD4-204ENST00000567745 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
THSD4-204ENST00000567745 ABCC10Q5T3U5 1492 aa22.25■■□□□ 1.15
THSD4-204ENST00000567745 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
THSD4-204ENST00000567745 ABCA9Q8IUA7 1624 aa22.23■■□□□ 1.15
THSD4-204ENST00000567745 MAP3K4Q9Y6R4 1608 aa22.23■■□□□ 1.15
THSD4-204ENST00000567745 TROQ12816 1431 aaPredicted RBP22.23■■□□□ 1.15
THSD4-204ENST00000567745 MAP3K1Q13233 1512 aa22.22■■□□□ 1.15
THSD4-204ENST00000567745 GLI2P10070 1586 aa22.22■■□□□ 1.15
THSD4-204ENST00000567745 TSPOAP1O95153 1857 aa22.22■■□□□ 1.15
THSD4-204ENST00000567745 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
THSD4-204ENST00000567745 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
THSD4-204ENST00000567745 MTUS2Q5JR59 1369 aa22.17■■□□□ 1.14
THSD4-204ENST00000567745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.16■■□□□ 1.14
THSD4-204ENST00000567745 CDK11AQ9UQ88 783 aaPredicted RBP22.16■■□□□ 1.14
THSD4-204ENST00000567745 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
THSD4-204ENST00000567745 PPRC1Q5VV67 1664 aaKnown RBP22.14■■□□□ 1.14
THSD4-204ENST00000567745 PLEKHD1A6NEE1 506 aa22.14■■□□□ 1.13
THSD4-204ENST00000567745 ITSN2Q9NZM3 1697 aa22.14■■□□□ 1.13
THSD4-204ENST00000567745 PREX2Q70Z35 1606 aa22.13■■□□□ 1.13
THSD4-204ENST00000567745 CDC42BPAQ5VT25 1732 aa22.12■■□□□ 1.13
THSD4-204ENST00000567745 APLP2Q06481 763 aa22.11■■□□□ 1.13
THSD4-204ENST00000567745 KCNH8Q96L42 1107 aa22.1■■□□□ 1.13
THSD4-204ENST00000567745 CFAP74Q9C0B2 1584 aa22.09■■□□□ 1.13
THSD4-204ENST00000567745 FAM69CQ0P6D2 419 aa22.08■■□□□ 1.13
THSD4-204ENST00000567745 NCOA2Q15596 1464 aa22.05■■□□□ 1.12
THSD4-204ENST00000567745 CDC42BPBQ9Y5S2 1711 aa22.05■■□□□ 1.12
THSD4-204ENST00000567745 TEX14Q8IWB6 1497 aa22.03■■□□□ 1.12
THSD4-204ENST00000567745 ARHGAP5Q13017 1502 aa22.02■■□□□ 1.12
THSD4-204ENST00000567745 CD109Q6YHK3 1445 aa22.02■■□□□ 1.12
THSD4-204ENST00000567745 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
THSD4-204ENST00000567745 KANK4Q5T7N3 995 aaPredicted RBP21.98■■□□□ 1.11
THSD4-204ENST00000567745 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms