RNA–Protein interactions for RNA: ENST00000567745.5

THSD4-204, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 1,218 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-204ENST00000567745 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
THSD4-204ENST00000567745 CCDC180Q9P1Z9 1646 aa29.96■■■□□ 2.39
THSD4-204ENST00000567745 ABCC9O60706 1549 aa28.79■■■□□ 2.2
THSD4-204ENST00000567745 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
THSD4-204ENST00000567745 NACADO15069 1562 aa27.93■■■□□ 2.06
THSD4-204ENST00000567745 RB1CC1Q8TDY2 1594 aa27.92■■■□□ 2.06
THSD4-204ENST00000567745 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
THSD4-204ENST00000567745 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
THSD4-204ENST00000567745 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
THSD4-204ENST00000567745 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
THSD4-204ENST00000567745 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
THSD4-204ENST00000567745 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
THSD4-204ENST00000567745 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
THSD4-204ENST00000567745 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
THSD4-204ENST00000567745 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
THSD4-204ENST00000567745 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
THSD4-204ENST00000567745 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
THSD4-204ENST00000567745 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
THSD4-204ENST00000567745 BAZ1AQ9NRL2 1556 aaPredicted RBP26.14■■□□□ 1.78
THSD4-204ENST00000567745 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
THSD4-204ENST00000567745 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
THSD4-204ENST00000567745 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
THSD4-204ENST00000567745 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
THSD4-204ENST00000567745 WIZO95785 1651 aa25.8■■□□□ 1.72
THSD4-204ENST00000567745 ATAD2BQ9ULI0 1458 aa25.78■■□□□ 1.72
THSD4-204ENST00000567745 HMGXB3Q12766 1538 aa25.74■■□□□ 1.71
THSD4-204ENST00000567745 RSF1Q96T23 1441 aaPredicted RBP25.74■■□□□ 1.71
THSD4-204ENST00000567745 BAZ1BQ9UIG0 1483 aaKnown RBP25.67■■□□□ 1.7
THSD4-204ENST00000567745 NCAPD3P42695 1498 aa25.65■■□□□ 1.7
THSD4-204ENST00000567745 TOP2AP11388 1531 aaKnown RBP25.55■■□□□ 1.68
THSD4-204ENST00000567745 SUPT5HO00267 1087 aaKnown RBP25.32■■□□□ 1.64
THSD4-204ENST00000567745 CCDC88BA6NC98 1476 aa25.11■■□□□ 1.61
THSD4-204ENST00000567745 PRDM2Q13029 1718 aa25.07■■□□□ 1.6
THSD4-204ENST00000567745 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
THSD4-204ENST00000567745 DNAJC5Q9H3Z4 198 aa25.04■■□□□ 1.6
THSD4-204ENST00000567745 NESP48681 1621 aa25.02■■□□□ 1.6
THSD4-204ENST00000567745 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
THSD4-204ENST00000567745 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
THSD4-204ENST00000567745 CFTRP13569 1480 aa24.9■■□□□ 1.58
THSD4-204ENST00000567745 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
THSD4-204ENST00000567745 PDS5BQ9NTI5 1447 aa24.77■■□□□ 1.56
THSD4-204ENST00000567745 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
THSD4-204ENST00000567745 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
THSD4-204ENST00000567745 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
THSD4-204ENST00000567745 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
THSD4-204ENST00000567745 WDR62O43379 1518 aa24.53■■□□□ 1.52
THSD4-204ENST00000567745 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
THSD4-204ENST00000567745 DNMBPQ6XZF7 1577 aa24.47■■□□□ 1.51
THSD4-204ENST00000567745 ABCC8Q09428 1581 aa24.45■■□□□ 1.5
THSD4-204ENST00000567745 TOPBP1Q92547 1522 aa24.4■■□□□ 1.5
THSD4-204ENST00000567745 CUX2O14529 1486 aa24.38■■□□□ 1.49
THSD4-204ENST00000567745 CUX1P39880 1505 aa24.38■■□□□ 1.49
THSD4-204ENST00000567745 BIVM-ERCC5R4GMW8 1640 aa24.36■■□□□ 1.49
THSD4-204ENST00000567745 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
THSD4-204ENST00000567745 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
THSD4-204ENST00000567745 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
THSD4-204ENST00000567745 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
THSD4-204ENST00000567745 POLA1P09884 1462 aaPredicted RBP24.22■■□□□ 1.47
THSD4-204ENST00000567745 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
THSD4-204ENST00000567745 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
THSD4-204ENST00000567745 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
THSD4-204ENST00000567745 EIF4G3O43432 1585 aaKnown RBP24.08■■□□□ 1.44
THSD4-204ENST00000567745 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
THSD4-204ENST00000567745 SOGA1O94964 1423 aa24.01■■□□□ 1.43
THSD4-204ENST00000567745 ABCA10Q8WWZ4 1543 aa23.99■■□□□ 1.43
THSD4-204ENST00000567745 ZNF608Q9ULD9 1512 aaPredicted RBP23.99■■□□□ 1.43
THSD4-204ENST00000567745 ABCA5Q8WWZ7 1642 aa23.99■■□□□ 1.43
THSD4-204ENST00000567745 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
THSD4-204ENST00000567745 TRIM41Q8WV44 630 aa23.87■■□□□ 1.41
THSD4-204ENST00000567745 AQRO60306 1485 aaKnown RBP eCLIP23.84■■□□□ 1.41
THSD4-204ENST00000567745 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.41
THSD4-204ENST00000567745 GAPVD1Q14C86 1478 aa23.82■■□□□ 1.4
THSD4-204ENST00000567745 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
THSD4-204ENST00000567745 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
THSD4-204ENST00000567745 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
THSD4-204ENST00000567745 SNAPC4Q5SXM2 1469 aa23.75■■□□□ 1.39
THSD4-204ENST00000567745 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
THSD4-204ENST00000567745 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
THSD4-204ENST00000567745 CHD1O14646 1710 aa23.73■■□□□ 1.39
THSD4-204ENST00000567745 CUL7Q14999 1698 aa23.71■■□□□ 1.39
THSD4-204ENST00000567745 MAGI1Q96QZ7 1491 aaPredicted RBP23.7■■□□□ 1.38
THSD4-204ENST00000567745 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
THSD4-204ENST00000567745 SYNJ2O15056 1496 aa23.59■■□□□ 1.37
THSD4-204ENST00000567745 EEA1Q15075 1411 aa23.57■■□□□ 1.36
THSD4-204ENST00000567745 FHAD1B1AJZ9 1412 aa23.54■■□□□ 1.36
THSD4-204ENST00000567745 GRIN2AQ12879 1464 aa23.5■■□□□ 1.35
THSD4-204ENST00000567745 IGF1RP08069 1367 aa23.49■■□□□ 1.35
THSD4-204ENST00000567745 FBLN2P98095 1184 aa23.43■■□□□ 1.34
THSD4-204ENST00000567745 KIF21BO75037 1637 aa23.43■■□□□ 1.34
THSD4-204ENST00000567745 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
THSD4-204ENST00000567745 FAM9AQ8IZU1 332 aaPredicted RBP23.41■■□□□ 1.34
THSD4-204ENST00000567745 CTTNBP2Q8WZ74 1663 aa23.41■■□□□ 1.34
THSD4-204ENST00000567745 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
THSD4-204ENST00000567745 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
THSD4-204ENST00000567745 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
THSD4-204ENST00000567745 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
THSD4-204ENST00000567745 CLASP1Q7Z460 1538 aa23.37■■□□□ 1.33
THSD4-204ENST00000567745 NUP160Q12769 1436 aa23.33■■□□□ 1.33
THSD4-204ENST00000567745 CSRNP3Q8WYN3 585 aa23.32■■□□□ 1.32
THSD4-204ENST00000567745 IQGAP2Q13576 1575 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms