RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 ABCC10Q5T3U5 1492 aa25.53■■□□□ 1.68
SMG1-213ENST00000567737 NPM1P06748 294 aaKnown RBP eCLIP25.48■■□□□ 1.67
SMG1-213ENST00000567737 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
SMG1-213ENST00000567737 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
SMG1-213ENST00000567737 KDM6BO15054 1643 aa25.45■■□□□ 1.67
SMG1-213ENST00000567737 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
SMG1-213ENST00000567737 DIP2BQ9P265 1576 aa25.4■■□□□ 1.66
SMG1-213ENST00000567737 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
SMG1-213ENST00000567737 WRNQ14191 1432 aaPredicted RBP eCLIP25.37■■□□□ 1.65
SMG1-213ENST00000567737 ERICH3Q5RHP9 1530 aa25.29■■□□□ 1.64
SMG1-213ENST00000567737 ADCY10Q96PN6 1610 aa25.25■■□□□ 1.63
SMG1-213ENST00000567737 TSPOAP1O95153 1857 aa25.24■■□□□ 1.63
SMG1-213ENST00000567737 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
SMG1-213ENST00000567737 ADGRL1O94910 1474 aa25.18■■□□□ 1.62
SMG1-213ENST00000567737 TOP2BQ02880 1626 aa25.14■■□□□ 1.61
SMG1-213ENST00000567737 BIVM-ERCC5R4GMW8 1640 aa25.14■■□□□ 1.61
SMG1-213ENST00000567737 HECW2Q9P2P5 1572 aa25.1■■□□□ 1.61
SMG1-213ENST00000567737 KIAA0586Q9BVV6 1533 aa24.99■■□□□ 1.59
SMG1-213ENST00000567737 PPRC1Q5VV67 1664 aaKnown RBP24.96■■□□□ 1.59
SMG1-213ENST00000567737 PTPRGP23470 1445 aa24.95■■□□□ 1.59
SMG1-213ENST00000567737 GLI2P10070 1586 aa24.95■■□□□ 1.58
SMG1-213ENST00000567737 PLB1Q6P1J6 1458 aa24.94■■□□□ 1.58
SMG1-213ENST00000567737 ASXL2Q76L83 1435 aa24.94■■□□□ 1.58
SMG1-213ENST00000567737 ABCC2Q92887 1545 aa24.93■■□□□ 1.58
SMG1-213ENST00000567737 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
SMG1-213ENST00000567737 FBXO41Q8TF61 875 aa24.92■■□□□ 1.58
SMG1-213ENST00000567737 COL17A1Q9UMD9 1497 aaPredicted RBP24.89■■□□□ 1.57
SMG1-213ENST00000567737 TEX14Q8IWB6 1497 aa24.83■■□□□ 1.57
SMG1-213ENST00000567737 TNIKQ9UKE5 1360 aa24.83■■□□□ 1.57
SMG1-213ENST00000567737 CARMIL2Q6F5E8 1435 aa24.81■■□□□ 1.56
SMG1-213ENST00000567737 PPP6R1Q9UPN7 881 aa24.81■■□□□ 1.56
SMG1-213ENST00000567737 ADRA2BP18089 450 aa24.79■■□□□ 1.56
SMG1-213ENST00000567737 CUL7Q14999 1698 aa24.78■■□□□ 1.56
SMG1-213ENST00000567737 UHRF1BP1LA0JNW5 1464 aa24.77■■□□□ 1.56
SMG1-213ENST00000567737 EPRSP07814 1512 aaKnown RBP24.77■■□□□ 1.56
SMG1-213ENST00000567737 MAP3K4Q9Y6R4 1608 aa24.77■■□□□ 1.56
SMG1-213ENST00000567737 IGF1RP08069 1367 aa24.76■■□□□ 1.55
SMG1-213ENST00000567737 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
SMG1-213ENST00000567737 UACAQ9BZF9 1416 aa24.73■■□□□ 1.55
SMG1-213ENST00000567737 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
SMG1-213ENST00000567737 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
SMG1-213ENST00000567737 IQGAP2Q13576 1575 aa24.61■■□□□ 1.53
SMG1-213ENST00000567737 CARMIL1Q5VZK9 1371 aa24.6■■□□□ 1.53
SMG1-213ENST00000567737 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
SMG1-213ENST00000567737 WDR7Q9Y4E6 1490 aa24.55■■□□□ 1.52
SMG1-213ENST00000567737 DISP1Q96F81 1524 aa24.55■■□□□ 1.52
SMG1-213ENST00000567737 LMTK3Q96Q04 1460 aa24.52■■□□□ 1.52
SMG1-213ENST00000567737 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
SMG1-213ENST00000567737 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
SMG1-213ENST00000567737 KIF21BO75037 1637 aa24.51■■□□□ 1.51
SMG1-213ENST00000567737 PTPRMP28827 1452 aa24.45■■□□□ 1.5
SMG1-213ENST00000567737 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
SMG1-213ENST00000567737 UGGT2Q9NYU1 1516 aa24.42■■□□□ 1.5
SMG1-213ENST00000567737 KCNH8Q96L42 1107 aa24.42■■□□□ 1.5
SMG1-213ENST00000567737 KIAA0556O60303 1618 aa24.4■■□□□ 1.5
SMG1-213ENST00000567737 PCF11O94913 1555 aaKnown RBP24.36■■□□□ 1.49
SMG1-213ENST00000567737 ADAMTSL3P82987 1691 aa24.36■■□□□ 1.49
SMG1-213ENST00000567737 ARAP3Q8WWN8 1544 aa24.34■■□□□ 1.49
SMG1-213ENST00000567737 RAPGEF2Q9Y4G8 1499 aa24.26■■□□□ 1.47
SMG1-213ENST00000567737 SOCS7O14512 581 aa24.26■■□□□ 1.47
SMG1-213ENST00000567737 ARID4BQ4LE39 1312 aaPredicted RBP24.24■■□□□ 1.47
SMG1-213ENST00000567737 CERKQ8TCT0 537 aa24.23■■□□□ 1.47
SMG1-213ENST00000567737 PHLDB1Q86UU1 1377 aa24.23■■□□□ 1.47
SMG1-213ENST00000567737 DISP3Q9P2K9 1392 aa24.23■■□□□ 1.47
SMG1-213ENST00000567737 BCORL1Q5H9F3 1711 aa24.22■■□□□ 1.47
SMG1-213ENST00000567737 MADDQ8WXG6 1647 aa24.22■■□□□ 1.47
SMG1-213ENST00000567737 ABCA8O94911 1581 aa24.22■■□□□ 1.47
SMG1-213ENST00000567737 ILDR2Q71H61 639 aa24.22■■□□□ 1.47
SMG1-213ENST00000567737 PIAS4Q8N2W9 510 aaPredicted RBP24.22■■□□□ 1.47
SMG1-213ENST00000567737 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
SMG1-213ENST00000567737 RAPGEF3O95398 923 aa24.18■■□□□ 1.46
SMG1-213ENST00000567737 HSPA2P54652 639 aa24.17■■□□□ 1.46
SMG1-213ENST00000567737 RIMS1Q86UR5 1692 aaKnown RBP24.11■■□□□ 1.45
SMG1-213ENST00000567737 NEO1Q92859 1461 aa24.1■■□□□ 1.45
SMG1-213ENST00000567737 ARID3CA6NKF2 412 aa24.09■■□□□ 1.45
SMG1-213ENST00000567737 ABCA9Q8IUA7 1624 aa24.09■■□□□ 1.45
SMG1-213ENST00000567737 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
SMG1-213ENST00000567737 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
SMG1-213ENST00000567737 FRMPD1Q5SYB0 1578 aa24.04■■□□□ 1.44
SMG1-213ENST00000567737 ATP10BO94823 1461 aa24.04■■□□□ 1.44
SMG1-213ENST00000567737 ARHGEF40Q8TER5 1519 aa24■■□□□ 1.43
SMG1-213ENST00000567737 POGZQ7Z3K3 1410 aa24■■□□□ 1.43
SMG1-213ENST00000567737 SPATA31D1Q6ZQQ2 1576 aa23.96■■□□□ 1.43
SMG1-213ENST00000567737 FANCAO15360 1455 aa23.96■■□□□ 1.43
SMG1-213ENST00000567737 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
SMG1-213ENST00000567737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.92■■□□□ 1.42
SMG1-213ENST00000567737 HNRNPUL2Q1KMD3 747 aaKnown RBP23.92■■□□□ 1.42
SMG1-213ENST00000567737 AKNAQ7Z591 1439 aa23.92■■□□□ 1.42
SMG1-213ENST00000567737 P3H3Q8IVL6 736 aa23.89■■□□□ 1.41
SMG1-213ENST00000567737 FHOD3Q2V2M9 1422 aa23.87■■□□□ 1.41
SMG1-213ENST00000567737 MLECQ14165 292 aa23.87■■□□□ 1.41
SMG1-213ENST00000567737 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
SMG1-213ENST00000567737 RICTORQ6R327 1708 aa23.86■■□□□ 1.41
SMG1-213ENST00000567737 YEATS2Q9ULM3 1422 aa23.84■■□□□ 1.41
SMG1-213ENST00000567737 ZFYVE16Q7Z3T8 1539 aa23.84■■□□□ 1.41
SMG1-213ENST00000567737 TTC37Q6PGP7 1564 aa23.83■■□□□ 1.41
SMG1-213ENST00000567737 EFCAB5A4FU69 1503 aa23.83■■□□□ 1.41
SMG1-213ENST00000567737 FER1L4A9Z1Z3 1794 aa23.82■■□□□ 1.4
SMG1-213ENST00000567737 ZMYM4Q5VZL5 1548 aa23.81■■□□□ 1.4
SMG1-213ENST00000567737 RAPGEF6Q8TEU7 1601 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms