RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
PKD1-233ENST00000567355 PRG4Q92954 1404 aaPredicted RBP28.47■■■□□ 2.15
PKD1-233ENST00000567355 KIAA0586Q9BVV6 1533 aa28.47■■■□□ 2.15
PKD1-233ENST00000567355 RAPGEF2Q9Y4G8 1499 aa28.3■■■□□ 2.12
PKD1-233ENST00000567355 TRHP20396 242 aaPredicted RBP28.3■■■□□ 2.12
PKD1-233ENST00000567355 IQGAP2Q13576 1575 aa28.24■■■□□ 2.11
PKD1-233ENST00000567355 PRXQ9BXM0 1461 aa28.16■■■□□ 2.1
PKD1-233ENST00000567355 ADCY10Q96PN6 1610 aa28.14■■■□□ 2.09
PKD1-233ENST00000567355 DISP1Q96F81 1524 aa28.12■■■□□ 2.09
PKD1-233ENST00000567355 UGGT2Q9NYU1 1516 aa28.12■■■□□ 2.09
PKD1-233ENST00000567355 CARMIL2Q6F5E8 1435 aa28.11■■■□□ 2.09
PKD1-233ENST00000567355 TNIKQ9UKE5 1360 aa28.08■■■□□ 2.09
PKD1-233ENST00000567355 PTPRGP23470 1445 aa28.07■■■□□ 2.08
PKD1-233ENST00000567355 CTTNBP2Q8WZ74 1663 aa28.07■■■□□ 2.08
PKD1-233ENST00000567355 MAPKBP1O60336 1514 aa28.04■■■□□ 2.08
PKD1-233ENST00000567355 KIF13AQ9H1H9 1805 aa28■■■□□ 2.07
PKD1-233ENST00000567355 KIAA0556O60303 1618 aa28■■■□□ 2.07
PKD1-233ENST00000567355 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
PKD1-233ENST00000567355 EEA1Q15075 1411 aa27.97■■■□□ 2.07
PKD1-233ENST00000567355 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
PKD1-233ENST00000567355 UHRF1BP1LA0JNW5 1464 aa27.95■■■□□ 2.06
PKD1-233ENST00000567355 ABCC10Q5T3U5 1492 aa27.94■■■□□ 2.06
PKD1-233ENST00000567355 ABCC2Q92887 1545 aa27.91■■■□□ 2.06
PKD1-233ENST00000567355 UACAQ9BZF9 1416 aa27.9■■■□□ 2.06
PKD1-233ENST00000567355 DIP2BQ9P265 1576 aa27.89■■■□□ 2.05
PKD1-233ENST00000567355 TTBK1Q5TCY1 1321 aaPredicted RBP27.89■■■□□ 2.05
PKD1-233ENST00000567355 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
PKD1-233ENST00000567355 CHIC1Q5VXU3 224 aa27.84■■■□□ 2.05
PKD1-233ENST00000567355 FAM69CQ0P6D2 419 aa27.81■■■□□ 2.04
PKD1-233ENST00000567355 KDM5BQ9UGL1 1544 aa27.81■■■□□ 2.04
PKD1-233ENST00000567355 ASXL2Q76L83 1435 aa27.75■■■□□ 2.03
PKD1-233ENST00000567355 KIF21BO75037 1637 aa27.74■■■□□ 2.03
PKD1-233ENST00000567355 PLB1Q6P1J6 1458 aa27.74■■■□□ 2.03
PKD1-233ENST00000567355 ABCA8O94911 1581 aa27.73■■■□□ 2.03
PKD1-233ENST00000567355 ZCCHC11Q5TAX3 1644 aaKnown RBP27.73■■■□□ 2.03
PKD1-233ENST00000567355 SAMD9Q5K651 1589 aa27.73■■■□□ 2.03
PKD1-233ENST00000567355 FAM9AQ8IZU1 332 aaPredicted RBP27.72■■■□□ 2.03
PKD1-233ENST00000567355 GLI2P10070 1586 aa27.69■■■□□ 2.02
PKD1-233ENST00000567355 EPRSP07814 1512 aaKnown RBP27.61■■■□□ 2.01
PKD1-233ENST00000567355 TSPOAP1O95153 1857 aa27.59■■■□□ 2.01
PKD1-233ENST00000567355 P3H3Q8IVL6 736 aa27.58■■■□□ 2.01
PKD1-233ENST00000567355 PPRC1Q5VV67 1664 aaKnown RBP27.57■■■□□ 2
PKD1-233ENST00000567355 WDR7Q9Y4E6 1490 aa27.56■■■□□ 2
PKD1-233ENST00000567355 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
PKD1-233ENST00000567355 EFCAB5A4FU69 1503 aa27.5■■□□□ 1.99
PKD1-233ENST00000567355 RAPGEF6Q8TEU7 1601 aa27.49■■□□□ 1.99
PKD1-233ENST00000567355 ATP10BO94823 1461 aa27.48■■□□□ 1.99
PKD1-233ENST00000567355 KDM6BO15054 1643 aa27.48■■□□□ 1.99
PKD1-233ENST00000567355 FHOD3Q2V2M9 1422 aa27.47■■□□□ 1.99
PKD1-233ENST00000567355 RANGAP1P46060 587 aaPredicted RBP27.43■■□□□ 1.98
PKD1-233ENST00000567355 NUP153P49790 1475 aaKnown RBP27.4■■□□□ 1.98
PKD1-233ENST00000567355 CFAP43Q8NDM7 1665 aa27.38■■□□□ 1.97
PKD1-233ENST00000567355 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
PKD1-233ENST00000567355 TEX14Q8IWB6 1497 aa27.37■■□□□ 1.97
PKD1-233ENST00000567355 ARID3CA6NKF2 412 aa27.34■■□□□ 1.97
PKD1-233ENST00000567355 EHMT2Q96KQ7 1210 aa27.34■■□□□ 1.97
PKD1-233ENST00000567355 MAGI3Q5TCQ9 1506 aa27.34■■□□□ 1.97
PKD1-233ENST00000567355 KCNH8Q96L42 1107 aa27.33■■□□□ 1.97
PKD1-233ENST00000567355 COL17A1Q9UMD9 1497 aaPredicted RBP27.32■■□□□ 1.96
PKD1-233ENST00000567355 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
PKD1-233ENST00000567355 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
PKD1-233ENST00000567355 ABCA9Q8IUA7 1624 aa27.27■■□□□ 1.96
PKD1-233ENST00000567355 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
PKD1-233ENST00000567355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.18■■□□□ 1.94
PKD1-233ENST00000567355 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
PKD1-233ENST00000567355 CDK13Q14004 1512 aaKnown RBP27.14■■□□□ 1.94
PKD1-233ENST00000567355 HECW1Q76N89 1606 aa27.13■■□□□ 1.93
PKD1-233ENST00000567355 PLEKHD1A6NEE1 506 aa27.13■■□□□ 1.93
PKD1-233ENST00000567355 ARAP3Q8WWN8 1544 aa27.12■■□□□ 1.93
PKD1-233ENST00000567355 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
PKD1-233ENST00000567355 PHLDB1Q86UU1 1377 aa27.09■■□□□ 1.93
PKD1-233ENST00000567355 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.07■■□□□ 1.92
PKD1-233ENST00000567355 NEO1Q92859 1461 aa27.06■■□□□ 1.92
PKD1-233ENST00000567355 KDM4FA0A1W2PPD8 638 aa27.04■■□□□ 1.92
PKD1-233ENST00000567355 LRRIQ1Q96JM4 1722 aa27.04■■□□□ 1.92
PKD1-233ENST00000567355 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
PKD1-233ENST00000567355 CASKIN1Q8WXD9 1431 aa26.99■■□□□ 1.91
PKD1-233ENST00000567355 CLIP1P30622 1438 aa26.99■■□□□ 1.91
PKD1-233ENST00000567355 PCF11O94913 1555 aaKnown RBP26.98■■□□□ 1.91
PKD1-233ENST00000567355 ATP1B4Q9UN42 357 aaPredicted RBP26.97■■□□□ 1.91
PKD1-233ENST00000567355 FRMPD1Q5SYB0 1578 aa26.93■■□□□ 1.9
PKD1-233ENST00000567355 CDK11AQ9UQ88 783 aaPredicted RBP26.93■■□□□ 1.9
PKD1-233ENST00000567355 CFAP74Q9C0B2 1584 aa26.92■■□□□ 1.9
PKD1-233ENST00000567355 TROQ12816 1431 aaPredicted RBP26.92■■□□□ 1.9
PKD1-233ENST00000567355 FANCAO15360 1455 aa26.92■■□□□ 1.9
PKD1-233ENST00000567355 ADGRL1O94910 1474 aa26.92■■□□□ 1.9
PKD1-233ENST00000567355 CCDC18Q5T9S5 1454 aa26.91■■□□□ 1.9
PKD1-233ENST00000567355 FYCO1Q9BQS8 1478 aa26.91■■□□□ 1.9
PKD1-233ENST00000567355 AKNAQ7Z591 1439 aa26.9■■□□□ 1.9
PKD1-233ENST00000567355 KIF14Q15058 1648 aa26.9■■□□□ 1.9
PKD1-233ENST00000567355 PLCH2O75038 1416 aa26.9■■□□□ 1.9
PKD1-233ENST00000567355 RAPGEF3O95398 923 aa26.89■■□□□ 1.9
PKD1-233ENST00000567355 RICTORQ6R327 1708 aa26.86■■□□□ 1.89
PKD1-233ENST00000567355 DENND4BO75064 1496 aaPredicted RBP26.84■■□□□ 1.89
PKD1-233ENST00000567355 MYO5CQ9NQX4 1742 aa26.84■■□□□ 1.89
PKD1-233ENST00000567355 CEP162Q5TB80 1403 aa26.8■■□□□ 1.88
PKD1-233ENST00000567355 ZMYM4Q5VZL5 1548 aa26.77■■□□□ 1.88
PKD1-233ENST00000567355 EFCAB2Q5VUJ9 269 aa26.74■■□□□ 1.87
PKD1-233ENST00000567355 ARHGEF40Q8TER5 1519 aa26.74■■□□□ 1.87
PKD1-233ENST00000567355 POGZQ7Z3K3 1410 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms