RNA–Protein interactions for RNA: ENST00000566611.5

KATNB1-206, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 3,854 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-206ENST00000566611 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
KATNB1-206ENST00000566611 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
KATNB1-206ENST00000566611 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
KATNB1-206ENST00000566611 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
KATNB1-206ENST00000566611 RAB3GAP2Q9H2M9 1393 aa21.52■■□□□ 1.04
KATNB1-206ENST00000566611 FANCD2Q9BXW9 1451 aa21.5■■□□□ 1.03
KATNB1-206ENST00000566611 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
KATNB1-206ENST00000566611 FGD5Q6ZNL6 1462 aa21.5■■□□□ 1.03
KATNB1-206ENST00000566611 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
KATNB1-206ENST00000566611 RAD54L2Q9Y4B4 1467 aa21.48■■□□□ 1.03
KATNB1-206ENST00000566611 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
KATNB1-206ENST00000566611 DHX57Q6P158 1386 aaKnown RBP21.48■■□□□ 1.03
KATNB1-206ENST00000566611 CUX1P39880 1505 aa21.47■■□□□ 1.03
KATNB1-206ENST00000566611 CFTRP13569 1480 aa21.47■■□□□ 1.03
KATNB1-206ENST00000566611 PEG3Q9GZU2 1588 aa21.45■■□□□ 1.02
KATNB1-206ENST00000566611 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
KATNB1-206ENST00000566611 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
KATNB1-206ENST00000566611 PRXQ9BXM0 1461 aa21.42■■□□□ 1.02
KATNB1-206ENST00000566611 NESP48681 1621 aa21.4■■□□□ 1.02
KATNB1-206ENST00000566611 FKBP8Q14318 412 aa21.4■■□□□ 1.02
KATNB1-206ENST00000566611 HMGXB3Q12766 1538 aa21.36■■□□□ 1.01
KATNB1-206ENST00000566611 ARHGAP35Q9NRY4 1499 aa21.35■■□□□ 1.01
KATNB1-206ENST00000566611 HNRNPUQ00839 825 aaKnown RBP eCLIP21.35■■□□□ 1.01
KATNB1-206ENST00000566611 ERICH6Q7L0X2 663 aa21.35■■□□□ 1.01
KATNB1-206ENST00000566611 SLC4A1APQ9BWU0 796 aaKnown RBP21.35■■□□□ 1.01
KATNB1-206ENST00000566611 CC2D2AQ9P2K1 1620 aa21.35■■□□□ 1.01
KATNB1-206ENST00000566611 PDS5BQ9NTI5 1447 aa21.34■■□□□ 1.01
KATNB1-206ENST00000566611 FOXD1Q16676 465 aa21.33■■□□□ 1
KATNB1-206ENST00000566611 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
KATNB1-206ENST00000566611 KDM2AQ9Y2K7 1162 aa21.28■■□□□ 1
KATNB1-206ENST00000566611 PHLDB1Q86UU1 1377 aa21.28■■□□□ 1
KATNB1-206ENST00000566611 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
KATNB1-206ENST00000566611 CFDP1Q9UEE9 299 aaPredicted RBP21.28■■□□□ 1
KATNB1-206ENST00000566611 KCNH8Q96L42 1107 aa21.27■■□□□ 1
KATNB1-206ENST00000566611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.26■□□□□ 0.991e-6■■□□□ 12.2
KATNB1-206ENST00000566611 FMN1Q68DA7 1419 aa21.26■□□□□ 0.99
KATNB1-206ENST00000566611 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
KATNB1-206ENST00000566611 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.992e-10■■■■□ 24.2
KATNB1-206ENST00000566611 IRX6P78412 446 aaPredicted RBP21.22■□□□□ 0.99
KATNB1-206ENST00000566611 ERCC6Q03468 1493 aa21.22■□□□□ 0.99
KATNB1-206ENST00000566611 TSPY4P0CV99 314 aa21.22■□□□□ 0.99
KATNB1-206ENST00000566611 TSPY10P0CW01 314 aa21.22■□□□□ 0.99
KATNB1-206ENST00000566611 PLEKHD1A6NEE1 506 aa21.2■□□□□ 0.98
KATNB1-206ENST00000566611 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
KATNB1-206ENST00000566611 LRRC9Q6ZRR7 1453 aa21.15■□□□□ 0.98
KATNB1-206ENST00000566611 MRS2Q9HD23 443 aa21.14■□□□□ 0.98
KATNB1-206ENST00000566611 GAPVD1Q14C86 1478 aa21.14■□□□□ 0.97
KATNB1-206ENST00000566611 POLA1P09884 1462 aaPredicted RBP21.12■□□□□ 0.97
KATNB1-206ENST00000566611 RRBP1Q9P2E9 1410 aaKnown RBP21.11■□□□□ 0.97
KATNB1-206ENST00000566611 SALL2Q9Y467 1007 aaPredicted RBP21.11■□□□□ 0.97
KATNB1-206ENST00000566611 SUPT16HQ9Y5B9 1047 aaKnown RBP21.1■□□□□ 0.97
KATNB1-206ENST00000566611 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.973e-7■■■■■ 36.6
KATNB1-206ENST00000566611 RGL3Q3MIN7 710 aa21.09■□□□□ 0.97
KATNB1-206ENST00000566611 TOPBP1Q92547 1522 aa21.09■□□□□ 0.97
KATNB1-206ENST00000566611 TIMELESSQ9UNS1 1208 aa21.08■□□□□ 0.96
KATNB1-206ENST00000566611 MPHOSPH9Q99550 1183 aa21.07■□□□□ 0.96
KATNB1-206ENST00000566611 HSPA5P11021 654 aaKnown RBP21.06■□□□□ 0.96
KATNB1-206ENST00000566611 BIVM-ERCC5R4GMW8 1640 aa21.03■□□□□ 0.96
KATNB1-206ENST00000566611 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
KATNB1-206ENST00000566611 FGD6Q6ZV73 1430 aa21■□□□□ 0.95
KATNB1-206ENST00000566611 ZNF644Q9H582 1327 aaPredicted RBP20.99■□□□□ 0.95
KATNB1-206ENST00000566611 TMC1Q8TDI8 760 aa20.97■□□□□ 0.95
KATNB1-206ENST00000566611 CASKIN1Q8WXD9 1431 aa20.96■□□□□ 0.95
KATNB1-206ENST00000566611 CCDC18Q5T9S5 1454 aa20.96■□□□□ 0.95
KATNB1-206ENST00000566611 TIAM1Q13009 1591 aa20.95■□□□□ 0.95
KATNB1-206ENST00000566611 PKD2Q13563 968 aa20.95■□□□□ 0.94
KATNB1-206ENST00000566611 JPH4Q96JJ6 628 aa20.95■□□□□ 0.94
KATNB1-206ENST00000566611 CARD11Q9BXL7 1154 aa20.92■□□□□ 0.94
KATNB1-206ENST00000566611 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
KATNB1-206ENST00000566611 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
KATNB1-206ENST00000566611 NCOA2Q15596 1464 aa20.88■□□□□ 0.93
KATNB1-206ENST00000566611 MYT1Q01538 1121 aa20.88■□□□□ 0.93
KATNB1-206ENST00000566611 MYOM3Q5VTT5 1437 aa20.88■□□□□ 0.93
KATNB1-206ENST00000566611 DCAF11Q8TEB1 546 aa20.87■□□□□ 0.93
KATNB1-206ENST00000566611 ABCA10Q8WWZ4 1543 aa20.87■□□□□ 0.93
KATNB1-206ENST00000566611 HNRNPMP52272 730 aaKnown RBP eCLIP20.86■□□□□ 0.93
KATNB1-206ENST00000566611 FYCO1Q9BQS8 1478 aa20.86■□□□□ 0.93
KATNB1-206ENST00000566611 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
KATNB1-206ENST00000566611 CCER2I3L3R5 266 aa20.85■□□□□ 0.93
KATNB1-206ENST00000566611 PCF11O94913 1555 aaKnown RBP20.84■□□□□ 0.93
KATNB1-206ENST00000566611 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
KATNB1-206ENST00000566611 CARMIL2Q6F5E8 1435 aa20.82■□□□□ 0.92
KATNB1-206ENST00000566611 NUP155O75694 1391 aa20.8■□□□□ 0.92
KATNB1-206ENST00000566611 UACAQ9BZF9 1416 aa20.77■□□□□ 0.92
KATNB1-206ENST00000566611 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
KATNB1-206ENST00000566611 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
KATNB1-206ENST00000566611 NPM1P06748 294 aaKnown RBP eCLIP20.72■□□□□ 0.91
KATNB1-206ENST00000566611 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
KATNB1-206ENST00000566611 ANKRD30AQ9BXX3 1397 aa20.71■□□□□ 0.91
KATNB1-206ENST00000566611 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
KATNB1-206ENST00000566611 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
KATNB1-206ENST00000566611 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
KATNB1-206ENST00000566611 CDK13Q14004 1512 aaKnown RBP20.68■□□□□ 0.9
KATNB1-206ENST00000566611 B4GALNT3Q6L9W6 998 aa20.66■□□□□ 0.9
KATNB1-206ENST00000566611 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
KATNB1-206ENST00000566611 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
KATNB1-206ENST00000566611 NAIPQ13075 1403 aa20.65■□□□□ 0.9
KATNB1-206ENST00000566611 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
KATNB1-206ENST00000566611 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
KATNB1-206ENST00000566611 WASHC2AQ641Q2 1341 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms