RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 FAM69CQ0P6D2 419 aa27.23■■□□□ 1.95
RAB40C-210ENST00000566290 SHROOM2Q13796 1616 aa27.21■■□□□ 1.95
RAB40C-210ENST00000566290 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
RAB40C-210ENST00000566290 ABCC10Q5T3U5 1492 aa27.13■■□□□ 1.93
RAB40C-210ENST00000566290 LOC105371045A0A1W2PR82 267 aa27.13■■□□□ 1.93
RAB40C-210ENST00000566290 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
RAB40C-210ENST00000566290 IGF1RP08069 1367 aa27.1■■□□□ 1.93
RAB40C-210ENST00000566290 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
RAB40C-210ENST00000566290 KIF21BO75037 1637 aa27.09■■□□□ 1.93
RAB40C-210ENST00000566290 JPH4Q96JJ6 628 aa27.05■■□□□ 1.92
RAB40C-210ENST00000566290 NPM1P06748 294 aaKnown RBP eCLIP27.03■■□□□ 1.92
RAB40C-210ENST00000566290 DIP2BQ9P265 1576 aa27.01■■□□□ 1.92
RAB40C-210ENST00000566290 FAM9AQ8IZU1 332 aaPredicted RBP27.01■■□□□ 1.91
RAB40C-210ENST00000566290 KDM6BO15054 1643 aa27.01■■□□□ 1.91
RAB40C-210ENST00000566290 RUSC2Q8N2Y8 1516 aa27■■□□□ 1.91
RAB40C-210ENST00000566290 CSRNP3Q8WYN3 585 aa26.99■■□□□ 1.91
RAB40C-210ENST00000566290 MAPKBP1O60336 1514 aa26.98■■□□□ 1.91
RAB40C-210ENST00000566290 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
RAB40C-210ENST00000566290 CUL7Q14999 1698 aa26.95■■□□□ 1.9
RAB40C-210ENST00000566290 TSPOAP1O95153 1857 aa26.93■■□□□ 1.9
RAB40C-210ENST00000566290 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
RAB40C-210ENST00000566290 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
RAB40C-210ENST00000566290 ADCY10Q96PN6 1610 aa26.9■■□□□ 1.9
RAB40C-210ENST00000566290 PRXQ9BXM0 1461 aa26.81■■□□□ 1.88
RAB40C-210ENST00000566290 KIAA0586Q9BVV6 1533 aa26.77■■□□□ 1.88
RAB40C-210ENST00000566290 ADGRL1O94910 1474 aa26.76■■□□□ 1.87
RAB40C-210ENST00000566290 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
RAB40C-210ENST00000566290 CEP162Q5TB80 1403 aa26.71■■□□□ 1.87
RAB40C-210ENST00000566290 HECW2Q9P2P5 1572 aa26.68■■□□□ 1.86
RAB40C-210ENST00000566290 PPRC1Q5VV67 1664 aaKnown RBP26.61■■□□□ 1.85
RAB40C-210ENST00000566290 IQGAP2Q13576 1575 aa26.59■■□□□ 1.85
RAB40C-210ENST00000566290 COL17A1Q9UMD9 1497 aaPredicted RBP26.59■■□□□ 1.85
RAB40C-210ENST00000566290 TTBK1Q5TCY1 1321 aaPredicted RBP26.59■■□□□ 1.85
RAB40C-210ENST00000566290 PTPRGP23470 1445 aa26.56■■□□□ 1.84
RAB40C-210ENST00000566290 ASXL2Q76L83 1435 aa26.54■■□□□ 1.84
RAB40C-210ENST00000566290 GLI2P10070 1586 aa26.52■■□□□ 1.84
RAB40C-210ENST00000566290 ABCC2Q92887 1545 aa26.49■■□□□ 1.83
RAB40C-210ENST00000566290 UBTFP17480 764 aaKnown RBP26.49■■□□□ 1.83
RAB40C-210ENST00000566290 DISP1Q96F81 1524 aa26.49■■□□□ 1.83
RAB40C-210ENST00000566290 PLB1Q6P1J6 1458 aa26.49■■□□□ 1.83
RAB40C-210ENST00000566290 CTTNBP2Q8WZ74 1663 aa26.46■■□□□ 1.83
RAB40C-210ENST00000566290 UGGT2Q9NYU1 1516 aa26.45■■□□□ 1.83
RAB40C-210ENST00000566290 FBXO41Q8TF61 875 aa26.45■■□□□ 1.82
RAB40C-210ENST00000566290 CLIP1P30622 1438 aa26.45■■□□□ 1.82
RAB40C-210ENST00000566290 CARMIL2Q6F5E8 1435 aa26.43■■□□□ 1.82
RAB40C-210ENST00000566290 EHMT2Q96KQ7 1210 aa26.38■■□□□ 1.81
RAB40C-210ENST00000566290 KIAA0556O60303 1618 aa26.37■■□□□ 1.81
RAB40C-210ENST00000566290 EPRSP07814 1512 aaKnown RBP26.36■■□□□ 1.81
RAB40C-210ENST00000566290 MAP3K4Q9Y6R4 1608 aa26.35■■□□□ 1.81
RAB40C-210ENST00000566290 VPS8Q8N3P4 1428 aa26.34■■□□□ 1.81
RAB40C-210ENST00000566290 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
RAB40C-210ENST00000566290 UHRF1BP1LA0JNW5 1464 aa26.33■■□□□ 1.81
RAB40C-210ENST00000566290 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
RAB40C-210ENST00000566290 TEX14Q8IWB6 1497 aa26.3■■□□□ 1.8
RAB40C-210ENST00000566290 KDM5BQ9UGL1 1544 aa26.24■■□□□ 1.79
RAB40C-210ENST00000566290 P3H3Q8IVL6 736 aa26.2■■□□□ 1.78
RAB40C-210ENST00000566290 EFCAB5A4FU69 1503 aa26.18■■□□□ 1.78
RAB40C-210ENST00000566290 ZCCHC11Q5TAX3 1644 aaKnown RBP26.17■■□□□ 1.78
RAB40C-210ENST00000566290 RANGAP1P46060 587 aaPredicted RBP26.16■■□□□ 1.78
RAB40C-210ENST00000566290 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
RAB40C-210ENST00000566290 SAMD9Q5K651 1589 aa26.15■■□□□ 1.78
RAB40C-210ENST00000566290 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
RAB40C-210ENST00000566290 ABCA8O94911 1581 aa26.11■■□□□ 1.77
RAB40C-210ENST00000566290 WDR7Q9Y4E6 1490 aa26.08■■□□□ 1.77
RAB40C-210ENST00000566290 CD109Q6YHK3 1445 aa26.06■■□□□ 1.76
RAB40C-210ENST00000566290 MAGI3Q5TCQ9 1506 aa26.05■■□□□ 1.76
RAB40C-210ENST00000566290 KCNH8Q96L42 1107 aa26.05■■□□□ 1.76
RAB40C-210ENST00000566290 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
RAB40C-210ENST00000566290 FHOD3Q2V2M9 1422 aa26.03■■□□□ 1.76
RAB40C-210ENST00000566290 PTPRMP28827 1452 aa26■■□□□ 1.75
RAB40C-210ENST00000566290 LMTK3Q96Q04 1460 aa25.99■■□□□ 1.75
RAB40C-210ENST00000566290 ARID3CA6NKF2 412 aa25.97■■□□□ 1.75
RAB40C-210ENST00000566290 CFAP43Q8NDM7 1665 aa25.96■■□□□ 1.75
RAB40C-210ENST00000566290 ADAMTSL3P82987 1691 aa25.93■■□□□ 1.74
RAB40C-210ENST00000566290 RAPGEF6Q8TEU7 1601 aa25.91■■□□□ 1.74
RAB40C-210ENST00000566290 ATP10BO94823 1461 aa25.91■■□□□ 1.74
RAB40C-210ENST00000566290 ARAP3Q8WWN8 1544 aa25.88■■□□□ 1.73
RAB40C-210ENST00000566290 NUP153P49790 1475 aaKnown RBP25.86■■□□□ 1.73
RAB40C-210ENST00000566290 PCF11O94913 1555 aaKnown RBP25.86■■□□□ 1.73
RAB40C-210ENST00000566290 FYCO1Q9BQS8 1478 aa25.85■■□□□ 1.73
RAB40C-210ENST00000566290 ILDR2Q71H61 639 aa25.85■■□□□ 1.73
RAB40C-210ENST00000566290 APLP2Q06481 763 aa25.83■■□□□ 1.73
RAB40C-210ENST00000566290 FMN1Q68DA7 1419 aa25.82■■□□□ 1.72
RAB40C-210ENST00000566290 TIAM1Q13009 1591 aa25.82■■□□□ 1.72
RAB40C-210ENST00000566290 RAPGEF3O95398 923 aa25.81■■□□□ 1.72
RAB40C-210ENST00000566290 HRCP23327 699 aa25.8■■□□□ 1.72
RAB40C-210ENST00000566290 HSPA2P54652 639 aa25.79■■□□□ 1.72
RAB40C-210ENST00000566290 CASKIN1Q8WXD9 1431 aa25.79■■□□□ 1.72
RAB40C-210ENST00000566290 SOCS7O14512 581 aa25.77■■□□□ 1.72
RAB40C-210ENST00000566290 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
RAB40C-210ENST00000566290 MADDQ8WXG6 1647 aa25.77■■□□□ 1.72
RAB40C-210ENST00000566290 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
RAB40C-210ENST00000566290 BCORL1Q5H9F3 1711 aa25.76■■□□□ 1.71
RAB40C-210ENST00000566290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
RAB40C-210ENST00000566290 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
RAB40C-210ENST00000566290 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
RAB40C-210ENST00000566290 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
RAB40C-210ENST00000566290 CDK13Q14004 1512 aaKnown RBP25.68■■□□□ 1.7
RAB40C-210ENST00000566290 PLPPR3Q6T4P5 718 aa25.67■■□□□ 1.7
RAB40C-210ENST00000566290 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms