RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 JPH4Q96JJ6 628 aa23.19■■□□□ 1.3
HACD3-208ENST00000566239 IGF1RP08069 1367 aa23.16■■□□□ 1.3
HACD3-208ENST00000566239 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
HACD3-208ENST00000566239 KIF13AQ9H1H9 1805 aa23.07■■□□□ 1.28
HACD3-208ENST00000566239 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
HACD3-208ENST00000566239 ADCY10Q96PN6 1610 aa22.98■■□□□ 1.27
HACD3-208ENST00000566239 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
HACD3-208ENST00000566239 IQGAP2Q13576 1575 aa22.97■■□□□ 1.27
HACD3-208ENST00000566239 MAPKBP1O60336 1514 aa22.93■■□□□ 1.26
HACD3-208ENST00000566239 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
HACD3-208ENST00000566239 RAPGEF2Q9Y4G8 1499 aa22.89■■□□□ 1.25
HACD3-208ENST00000566239 ABCC10Q5T3U5 1492 aa22.86■■□□□ 1.25
HACD3-208ENST00000566239 DIP2BQ9P265 1576 aa22.86■■□□□ 1.25
HACD3-208ENST00000566239 PTPRGP23470 1445 aa22.86■■□□□ 1.25
HACD3-208ENST00000566239 CTTNBP2Q8WZ74 1663 aa22.84■■□□□ 1.25
HACD3-208ENST00000566239 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
HACD3-208ENST00000566239 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
HACD3-208ENST00000566239 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
HACD3-208ENST00000566239 UGGT2Q9NYU1 1516 aa22.78■■□□□ 1.24
HACD3-208ENST00000566239 TSPOAP1O95153 1857 aa22.78■■□□□ 1.24
HACD3-208ENST00000566239 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
HACD3-208ENST00000566239 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
HACD3-208ENST00000566239 KIAA0556O60303 1618 aa22.75■■□□□ 1.23
HACD3-208ENST00000566239 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
HACD3-208ENST00000566239 UACAQ9BZF9 1416 aa22.71■■□□□ 1.23
HACD3-208ENST00000566239 AEBP2Q6ZN18 517 aaPredicted RBP22.7■■□□□ 1.22
HACD3-208ENST00000566239 PLB1Q6P1J6 1458 aa22.66■■□□□ 1.22
HACD3-208ENST00000566239 KDM6BO15054 1643 aa22.66■■□□□ 1.22
HACD3-208ENST00000566239 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
HACD3-208ENST00000566239 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
HACD3-208ENST00000566239 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
HACD3-208ENST00000566239 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
HACD3-208ENST00000566239 GLI2P10070 1586 aa22.63■■□□□ 1.21
HACD3-208ENST00000566239 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
HACD3-208ENST00000566239 PPRC1Q5VV67 1664 aaKnown RBP22.57■■□□□ 1.2
HACD3-208ENST00000566239 MAP3K4Q9Y6R4 1608 aa22.53■■□□□ 1.2
HACD3-208ENST00000566239 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.2
HACD3-208ENST00000566239 ABCA8O94911 1581 aa22.5■■□□□ 1.19
HACD3-208ENST00000566239 CSRNP3Q8WYN3 585 aa22.49■■□□□ 1.19
HACD3-208ENST00000566239 EEA1Q15075 1411 aa22.48■■□□□ 1.19
HACD3-208ENST00000566239 FAM9AQ8IZU1 332 aaPredicted RBP22.47■■□□□ 1.19
HACD3-208ENST00000566239 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
HACD3-208ENST00000566239 TEX14Q8IWB6 1497 aa22.45■■□□□ 1.18
HACD3-208ENST00000566239 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
HACD3-208ENST00000566239 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
HACD3-208ENST00000566239 P3H3Q8IVL6 736 aa22.36■■□□□ 1.17
HACD3-208ENST00000566239 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
HACD3-208ENST00000566239 KIF21BO75037 1637 aa22.33■■□□□ 1.17
HACD3-208ENST00000566239 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
HACD3-208ENST00000566239 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
HACD3-208ENST00000566239 CD109Q6YHK3 1445 aa22.3■■□□□ 1.16
HACD3-208ENST00000566239 COL17A1Q9UMD9 1497 aaPredicted RBP22.29■■□□□ 1.16
HACD3-208ENST00000566239 ATP10BO94823 1461 aa22.28■■□□□ 1.16
HACD3-208ENST00000566239 KDM4FA0A1W2PPD8 638 aa22.25■■□□□ 1.15
HACD3-208ENST00000566239 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
HACD3-208ENST00000566239 EFCAB5A4FU69 1503 aa22.23■■□□□ 1.15
HACD3-208ENST00000566239 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
HACD3-208ENST00000566239 ABCA9Q8IUA7 1624 aa22.23■■□□□ 1.15
HACD3-208ENST00000566239 FHOD3Q2V2M9 1422 aa22.2■■□□□ 1.14
HACD3-208ENST00000566239 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
HACD3-208ENST00000566239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
HACD3-208ENST00000566239 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
HACD3-208ENST00000566239 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
HACD3-208ENST00000566239 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
HACD3-208ENST00000566239 ARAP3Q8WWN8 1544 aa22.12■■□□□ 1.13
HACD3-208ENST00000566239 PHLDB1Q86UU1 1377 aa22.11■■□□□ 1.13
HACD3-208ENST00000566239 UBTFP17480 764 aaKnown RBP22.08■■□□□ 1.13
HACD3-208ENST00000566239 NEO1Q92859 1461 aa22.07■■□□□ 1.12
HACD3-208ENST00000566239 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
HACD3-208ENST00000566239 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
HACD3-208ENST00000566239 CFAP74Q9C0B2 1584 aa22.03■■□□□ 1.12
HACD3-208ENST00000566239 HECW1Q76N89 1606 aa22.02■■□□□ 1.11
HACD3-208ENST00000566239 FMN1Q68DA7 1419 aa22■■□□□ 1.11
HACD3-208ENST00000566239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.116e-6■■■■□ 21.5
HACD3-208ENST00000566239 CDK13Q14004 1512 aaKnown RBP21.98■■□□□ 1.11
HACD3-208ENST00000566239 ARHGAP35Q9NRY4 1499 aa21.97■■□□□ 1.11
HACD3-208ENST00000566239 TTC37Q6PGP7 1564 aa21.97■■□□□ 1.11
HACD3-208ENST00000566239 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.11
HACD3-208ENST00000566239 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
HACD3-208ENST00000566239 FANCAO15360 1455 aa21.93■■□□□ 1.1
HACD3-208ENST00000566239 RAPGEF3O95398 923 aa21.93■■□□□ 1.1
HACD3-208ENST00000566239 MYO5CQ9NQX4 1742 aa21.92■■□□□ 1.1
HACD3-208ENST00000566239 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
HACD3-208ENST00000566239 DENND4BO75064 1496 aaPredicted RBP21.9■■□□□ 1.1
HACD3-208ENST00000566239 AKNAQ7Z591 1439 aa21.89■■□□□ 1.1
HACD3-208ENST00000566239 LRRIQ1Q96JM4 1722 aa21.89■■□□□ 1.1
HACD3-208ENST00000566239 CDK11AQ9UQ88 783 aaPredicted RBP21.87■■□□□ 1.09
HACD3-208ENST00000566239 HECW2Q9P2P5 1572 aa21.87■■□□□ 1.09
HACD3-208ENST00000566239 ADAMTSL3P82987 1691 aa21.86■■□□□ 1.09
HACD3-208ENST00000566239 BCORL1Q5H9F3 1711 aa21.86■■□□□ 1.09
HACD3-208ENST00000566239 ARHGEF40Q8TER5 1519 aa21.85■■□□□ 1.09
HACD3-208ENST00000566239 KIF14Q15058 1648 aa21.85■■□□□ 1.09
HACD3-208ENST00000566239 PLCH2O75038 1416 aa21.82■■□□□ 1.08
HACD3-208ENST00000566239 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
HACD3-208ENST00000566239 CLIP1P30622 1438 aa21.8■■□□□ 1.08
HACD3-208ENST00000566239 PCF11O94913 1555 aaKnown RBP21.79■■□□□ 1.08
HACD3-208ENST00000566239 ARID4BQ4LE39 1312 aaPredicted RBP21.79■■□□□ 1.08
HACD3-208ENST00000566239 ZFYVE16Q7Z3T8 1539 aa21.78■■□□□ 1.08
HACD3-208ENST00000566239 TROQ12816 1431 aaPredicted RBP21.78■■□□□ 1.08
HACD3-208ENST00000566239 MADDQ8WXG6 1647 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms