RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 JPH4Q96JJ6 628 aa35.19■■■■□ 3.22
COTL1-204ENST00000564662 KIF13AQ9H1H9 1805 aa35.16■■■■□ 3.22
COTL1-204ENST00000564662 IGF1RP08069 1367 aa35.11■■■■□ 3.21
COTL1-204ENST00000564662 KIAA0586Q9BVV6 1533 aa35.06■■■■□ 3.2
COTL1-204ENST00000564662 ADCY10Q96PN6 1610 aa35.02■■■■□ 3.2
COTL1-204ENST00000564662 CARMIL1Q5VZK9 1371 aa34.91■■■■□ 3.18
COTL1-204ENST00000564662 MAPKBP1O60336 1514 aa34.91■■■■□ 3.18
COTL1-204ENST00000564662 DIP2BQ9P265 1576 aa34.86■■■■□ 3.17
COTL1-204ENST00000564662 IQGAP2Q13576 1575 aa34.84■■■■□ 3.17
COTL1-204ENST00000564662 NPM1P06748 294 aaKnown RBP eCLIP34.84■■■■□ 3.17
COTL1-204ENST00000564662 ABCC10Q5T3U5 1492 aa34.84■■■■□ 3.17
COTL1-204ENST00000564662 AEBP2Q6ZN18 517 aaPredicted RBP34.75■■■■□ 3.15
COTL1-204ENST00000564662 FAM69CQ0P6D2 419 aa34.74■■■■□ 3.15
COTL1-204ENST00000564662 CARMIL2Q6F5E8 1435 aa34.72■■■■□ 3.15
COTL1-204ENST00000564662 PTPRGP23470 1445 aa34.72■■■■□ 3.15
COTL1-204ENST00000564662 TSPOAP1O95153 1857 aa34.69■■■■□ 3.14
COTL1-204ENST00000564662 TTBK1Q5TCY1 1321 aaPredicted RBP34.69■■■■□ 3.14
COTL1-204ENST00000564662 TNIKQ9UKE5 1360 aa34.66■■■■□ 3.14
COTL1-204ENST00000564662 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
COTL1-204ENST00000564662 DISP1Q96F81 1524 aa34.6■■■■□ 3.13
COTL1-204ENST00000564662 ABCC2Q92887 1545 aa34.6■■■■□ 3.13
COTL1-204ENST00000564662 CTTNBP2Q8WZ74 1663 aa34.58■■■■□ 3.13
COTL1-204ENST00000564662 KDM6BO15054 1643 aa34.57■■■■□ 3.12
COTL1-204ENST00000564662 UGGT2Q9NYU1 1516 aa34.55■■■■□ 3.12
COTL1-204ENST00000564662 KIAA0556O60303 1618 aa34.55■■■■□ 3.12
COTL1-204ENST00000564662 UHRF1BP1LA0JNW5 1464 aa34.5■■■■□ 3.11
COTL1-204ENST00000564662 UACAQ9BZF9 1416 aa34.47■■■■□ 3.11
COTL1-204ENST00000564662 ASXL2Q76L83 1435 aa34.47■■■■□ 3.11
COTL1-204ENST00000564662 PLB1Q6P1J6 1458 aa34.43■■■■□ 3.1
COTL1-204ENST00000564662 ZCCHC11Q5TAX3 1644 aaKnown RBP34.42■■■■□ 3.1
COTL1-204ENST00000564662 PPRC1Q5VV67 1664 aaKnown RBP34.41■■■■□ 3.1
COTL1-204ENST00000564662 GLI2P10070 1586 aa34.4■■■■□ 3.1
COTL1-204ENST00000564662 KDM5BQ9UGL1 1544 aa34.36■■■■□ 3.09
COTL1-204ENST00000564662 MAP3K4Q9Y6R4 1608 aa34.3■■■■□ 3.08
COTL1-204ENST00000564662 EPRSP07814 1512 aaKnown RBP34.27■■■■□ 3.08
COTL1-204ENST00000564662 PRXQ9BXM0 1461 aa34.27■■■■□ 3.08
COTL1-204ENST00000564662 GOLGA3Q08378 1498 aa34.26■■■■□ 3.07
COTL1-204ENST00000564662 ABCA8O94911 1581 aa34.18■■■■□ 3.06
COTL1-204ENST00000564662 WDR7Q9Y4E6 1490 aa34.16■■■■□ 3.06
COTL1-204ENST00000564662 TEX14Q8IWB6 1497 aa34.11■■■■□ 3.05
COTL1-204ENST00000564662 CFAP43Q8NDM7 1665 aa34.05■■■■□ 3.04
COTL1-204ENST00000564662 KDM4FA0A1W2PPD8 638 aa34.04■■■■□ 3.04
COTL1-204ENST00000564662 COL17A1Q9UMD9 1497 aaPredicted RBP34.03■■■■□ 3.04
COTL1-204ENST00000564662 SAMD9Q5K651 1589 aa33.98■■■■□ 3.03
COTL1-204ENST00000564662 CSRNP3Q8WYN3 585 aa33.92■■■■□ 3.02
COTL1-204ENST00000564662 P3H3Q8IVL6 736 aa33.91■■■■□ 3.02
COTL1-204ENST00000564662 ADGRL1O94910 1474 aa33.9■■■■□ 3.02
COTL1-204ENST00000564662 CD109Q6YHK3 1445 aa33.89■■■■□ 3.02
COTL1-204ENST00000564662 MAGI3Q5TCQ9 1506 aa33.89■■■■□ 3.02
COTL1-204ENST00000564662 KCNH8Q96L42 1107 aa33.88■■■■□ 3.01
COTL1-204ENST00000564662 RAPGEF6Q8TEU7 1601 aa33.86■■■■□ 3.01
COTL1-204ENST00000564662 EEA1Q15075 1411 aa33.86■■■■□ 3.01
COTL1-204ENST00000564662 ARID3CA6NKF2 412 aa33.85■■■■□ 3.01
COTL1-204ENST00000564662 ATP10BO94823 1461 aa33.82■■■■□ 3
COTL1-204ENST00000564662 FAM9AQ8IZU1 332 aaPredicted RBP33.81■■■■□ 3
COTL1-204ENST00000564662 ABCA9Q8IUA7 1624 aa33.75■■■□□ 2.99
COTL1-204ENST00000564662 KIF21BO75037 1637 aa33.71■■■□□ 2.99
COTL1-204ENST00000564662 RANGAP1P46060 587 aaPredicted RBP33.69■■■□□ 2.98
COTL1-204ENST00000564662 FHOD3Q2V2M9 1422 aa33.69■■■□□ 2.98
COTL1-204ENST00000564662 NUP153P49790 1475 aaKnown RBP33.66■■■□□ 2.98
COTL1-204ENST00000564662 ARAP3Q8WWN8 1544 aa33.62■■■□□ 2.97
COTL1-204ENST00000564662 EFCAB5A4FU69 1503 aa33.61■■■□□ 2.97
COTL1-204ENST00000564662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.59■■■□□ 2.97
COTL1-204ENST00000564662 HNRNPUL2Q1KMD3 747 aaKnown RBP33.59■■■□□ 2.97
COTL1-204ENST00000564662 NEO1Q92859 1461 aa33.5■■■□□ 2.95
COTL1-204ENST00000564662 HECW2Q9P2P5 1572 aa33.49■■■□□ 2.95
COTL1-204ENST00000564662 FRMPD1Q5SYB0 1578 aa33.47■■■□□ 2.95
COTL1-204ENST00000564662 PHLDB1Q86UU1 1377 aa33.47■■■□□ 2.95
COTL1-204ENST00000564662 TTC37Q6PGP7 1564 aa33.4■■■□□ 2.94
COTL1-204ENST00000564662 CFAP74Q9C0B2 1584 aa33.4■■■□□ 2.94
COTL1-204ENST00000564662 EHMT2Q96KQ7 1210 aa33.4■■■□□ 2.94
COTL1-204ENST00000564662 CDK13Q14004 1512 aaKnown RBP33.39■■■□□ 2.94
COTL1-204ENST00000564662 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.38■■■□□ 2.93
COTL1-204ENST00000564662 RAPGEF3O95398 923 aa33.37■■■□□ 2.93
COTL1-204ENST00000564662 PLEKHD1A6NEE1 506 aa33.36■■■□□ 2.93
COTL1-204ENST00000564662 RICTORQ6R327 1708 aa33.36■■■□□ 2.93
COTL1-204ENST00000564662 HECW1Q76N89 1606 aa33.33■■■□□ 2.93
COTL1-204ENST00000564662 ADAMTSL3P82987 1691 aa33.32■■■□□ 2.92
COTL1-204ENST00000564662 FANCAO15360 1455 aa33.31■■■□□ 2.92
COTL1-204ENST00000564662 ARHGEF40Q8TER5 1519 aa33.3■■■□□ 2.92
COTL1-204ENST00000564662 UBTFP17480 764 aaKnown RBP33.3■■■□□ 2.92
COTL1-204ENST00000564662 BCORL1Q5H9F3 1711 aa33.28■■■□□ 2.92
COTL1-204ENST00000564662 CHIC1Q5VXU3 224 aa33.28■■■□□ 2.92
COTL1-204ENST00000564662 ARHGAP35Q9NRY4 1499 aa33.26■■■□□ 2.92
COTL1-204ENST00000564662 DENND4BO75064 1496 aaPredicted RBP33.25■■■□□ 2.91
COTL1-204ENST00000564662 FMN1Q68DA7 1419 aa33.24■■■□□ 2.91
COTL1-204ENST00000564662 AKNAQ7Z591 1439 aa33.24■■■□□ 2.91
COTL1-204ENST00000564662 MADDQ8WXG6 1647 aa33.22■■■□□ 2.91
COTL1-204ENST00000564662 MYO5CQ9NQX4 1742 aa33.2■■■□□ 2.91
COTL1-204ENST00000564662 PTPRMP28827 1452 aa33.18■■■□□ 2.9
COTL1-204ENST00000564662 ZMYM4Q5VZL5 1548 aa33.18■■■□□ 2.9
COTL1-204ENST00000564662 LRRIQ1Q96JM4 1722 aa33.18■■■□□ 2.9
COTL1-204ENST00000564662 ATP1B4Q9UN42 357 aaPredicted RBP33.16■■■□□ 2.9
COTL1-204ENST00000564662 ARID4BQ4LE39 1312 aaPredicted RBP33.14■■■□□ 2.9
COTL1-204ENST00000564662 RIMS1Q86UR5 1692 aaKnown RBP33.13■■■□□ 2.89
COTL1-204ENST00000564662 KIF14Q15058 1648 aa33.13■■■□□ 2.89
COTL1-204ENST00000564662 ZFYVE16Q7Z3T8 1539 aa33.12■■■□□ 2.89
COTL1-204ENST00000564662 SIGLEC1Q9BZZ2 1709 aa33.11■■■□□ 2.89
COTL1-204ENST00000564662 PLCH2O75038 1416 aa33.08■■■□□ 2.89
COTL1-204ENST00000564662 YEATS2Q9ULM3 1422 aa33.05■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms