RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 KIAA0586Q9BVV6 1533 aa33.68■■■□□ 2.98
CMTM3-207ENST00000564060 JPH4Q96JJ6 628 aa33.64■■■□□ 2.98
CMTM3-207ENST00000564060 PRG4Q92954 1404 aaPredicted RBP33.62■■■□□ 2.97
CMTM3-207ENST00000564060 RAPGEF2Q9Y4G8 1499 aa33.59■■■□□ 2.97
CMTM3-207ENST00000564060 IQGAP2Q13576 1575 aa33.51■■■□□ 2.96
CMTM3-207ENST00000564060 CTTNBP2Q8WZ74 1663 aa33.42■■■□□ 2.94
CMTM3-207ENST00000564060 EEA1Q15075 1411 aa33.39■■■□□ 2.94
CMTM3-207ENST00000564060 PRXQ9BXM0 1461 aa33.38■■■□□ 2.93
CMTM3-207ENST00000564060 CARMIL2Q6F5E8 1435 aa33.36■■■□□ 2.93
CMTM3-207ENST00000564060 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
CMTM3-207ENST00000564060 UGGT2Q9NYU1 1516 aa33.29■■■□□ 2.92
CMTM3-207ENST00000564060 CSRNP3Q8WYN3 585 aa33.27■■■□□ 2.92
CMTM3-207ENST00000564060 TNIKQ9UKE5 1360 aa33.22■■■□□ 2.91
CMTM3-207ENST00000564060 CHIC1Q5VXU3 224 aa33.21■■■□□ 2.91
CMTM3-207ENST00000564060 PTPRGP23470 1445 aa33.2■■■□□ 2.91
CMTM3-207ENST00000564060 DISP1Q96F81 1524 aa33.2■■■□□ 2.91
CMTM3-207ENST00000564060 ADCY10Q96PN6 1610 aa33.2■■■□□ 2.9
CMTM3-207ENST00000564060 KIAA0556O60303 1618 aa33.18■■■□□ 2.9
CMTM3-207ENST00000564060 NPM1P06748 294 aaKnown RBP eCLIP33.13■■■□□ 2.89
CMTM3-207ENST00000564060 GOLGA3Q08378 1498 aa33.12■■■□□ 2.89
CMTM3-207ENST00000564060 MAPKBP1O60336 1514 aa33.07■■■□□ 2.88
CMTM3-207ENST00000564060 KIF21BO75037 1637 aa33.06■■■□□ 2.88
CMTM3-207ENST00000564060 TTBK1Q5TCY1 1321 aaPredicted RBP33.04■■■□□ 2.88
CMTM3-207ENST00000564060 FAM9AQ8IZU1 332 aaPredicted RBP33.04■■■□□ 2.88
CMTM3-207ENST00000564060 KIF13AQ9H1H9 1805 aa33.01■■■□□ 2.87
CMTM3-207ENST00000564060 UHRF1BP1LA0JNW5 1464 aa33■■■□□ 2.87
CMTM3-207ENST00000564060 UACAQ9BZF9 1416 aa32.99■■■□□ 2.87
CMTM3-207ENST00000564060 ABCC2Q92887 1545 aa32.98■■■□□ 2.87
CMTM3-207ENST00000564060 ABCC10Q5T3U5 1492 aa32.9■■■□□ 2.86
CMTM3-207ENST00000564060 SAMD9Q5K651 1589 aa32.89■■■□□ 2.86
CMTM3-207ENST00000564060 DIP2BQ9P265 1576 aa32.87■■■□□ 2.85
CMTM3-207ENST00000564060 KDM5BQ9UGL1 1544 aa32.84■■■□□ 2.85
CMTM3-207ENST00000564060 ZCCHC11Q5TAX3 1644 aaKnown RBP32.81■■■□□ 2.84
CMTM3-207ENST00000564060 ABCA8O94911 1581 aa32.8■■■□□ 2.84
CMTM3-207ENST00000564060 PLB1Q6P1J6 1458 aa32.8■■■□□ 2.84
CMTM3-207ENST00000564060 FAM69CQ0P6D2 419 aa32.78■■■□□ 2.84
CMTM3-207ENST00000564060 ASXL2Q76L83 1435 aa32.76■■■□□ 2.83
CMTM3-207ENST00000564060 EFCAB5A4FU69 1503 aa32.74■■■□□ 2.83
CMTM3-207ENST00000564060 P3H3Q8IVL6 736 aa32.7■■■□□ 2.83
CMTM3-207ENST00000564060 UBTFP17480 764 aaKnown RBP32.68■■■□□ 2.82
CMTM3-207ENST00000564060 GLI2P10070 1586 aa32.66■■■□□ 2.82
CMTM3-207ENST00000564060 TSPOAP1O95153 1857 aa32.65■■■□□ 2.82
CMTM3-207ENST00000564060 RAPGEF6Q8TEU7 1601 aa32.64■■■□□ 2.82
CMTM3-207ENST00000564060 RANGAP1P46060 587 aaPredicted RBP32.63■■■□□ 2.81
CMTM3-207ENST00000564060 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
CMTM3-207ENST00000564060 FHOD3Q2V2M9 1422 aa32.59■■■□□ 2.81
CMTM3-207ENST00000564060 EHMT2Q96KQ7 1210 aa32.58■■■□□ 2.81
CMTM3-207ENST00000564060 EPRSP07814 1512 aaKnown RBP32.57■■■□□ 2.8
CMTM3-207ENST00000564060 MAP3K4Q9Y6R4 1608 aa32.51■■■□□ 2.8
CMTM3-207ENST00000564060 ATP10BO94823 1461 aa32.48■■■□□ 2.79
CMTM3-207ENST00000564060 PPRC1Q5VV67 1664 aaKnown RBP32.46■■■□□ 2.79
CMTM3-207ENST00000564060 CFAP43Q8NDM7 1665 aa32.45■■■□□ 2.79
CMTM3-207ENST00000564060 KDM6BO15054 1643 aa32.44■■■□□ 2.78
CMTM3-207ENST00000564060 NUP153P49790 1475 aaKnown RBP32.43■■■□□ 2.78
CMTM3-207ENST00000564060 ARHGAP35Q9NRY4 1499 aa32.43■■■□□ 2.78
CMTM3-207ENST00000564060 FMN1Q68DA7 1419 aa32.4■■■□□ 2.78
CMTM3-207ENST00000564060 TEX14Q8IWB6 1497 aa32.4■■■□□ 2.78
CMTM3-207ENST00000564060 ARID3CA6NKF2 412 aa32.38■■■□□ 2.77
CMTM3-207ENST00000564060 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.34■■■□□ 2.77
CMTM3-207ENST00000564060 HNRNPUL2Q1KMD3 747 aaKnown RBP32.34■■■□□ 2.77
CMTM3-207ENST00000564060 KCNH8Q96L42 1107 aa32.33■■■□□ 2.77
CMTM3-207ENST00000564060 HECW1Q76N89 1606 aa32.32■■■□□ 2.76
CMTM3-207ENST00000564060 CD109Q6YHK3 1445 aa32.29■■■□□ 2.76
CMTM3-207ENST00000564060 ABCA9Q8IUA7 1624 aa32.28■■■□□ 2.76
CMTM3-207ENST00000564060 MAGI3Q5TCQ9 1506 aa32.27■■■□□ 2.76
CMTM3-207ENST00000564060 PLEKHD1A6NEE1 506 aa32.2■■■□□ 2.75
CMTM3-207ENST00000564060 CLIP1P30622 1438 aa32.17■■■□□ 2.74
CMTM3-207ENST00000564060 CDK13Q14004 1512 aaKnown RBP32.17■■■□□ 2.74
CMTM3-207ENST00000564060 ATP1B4Q9UN42 357 aaPredicted RBP32.14■■■□□ 2.74
CMTM3-207ENST00000564060 PCF11O94913 1555 aaKnown RBP32.11■■■□□ 2.73
CMTM3-207ENST00000564060 LRRIQ1Q96JM4 1722 aa32.1■■■□□ 2.73
CMTM3-207ENST00000564060 CDK11AQ9UQ88 783 aaPredicted RBP32.08■■■□□ 2.73
CMTM3-207ENST00000564060 CASKIN1Q8WXD9 1431 aa32.08■■■□□ 2.73
CMTM3-207ENST00000564060 COL17A1Q9UMD9 1497 aaPredicted RBP32.06■■■□□ 2.72
CMTM3-207ENST00000564060 PHLDB1Q86UU1 1377 aa32.06■■■□□ 2.72
CMTM3-207ENST00000564060 CCDC18Q5T9S5 1454 aa32.05■■■□□ 2.72
CMTM3-207ENST00000564060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.04■■■□□ 2.723e-7■■■■■ 59
CMTM3-207ENST00000564060 FYCO1Q9BQS8 1478 aa32.03■■■□□ 2.72
CMTM3-207ENST00000564060 NEO1Q92859 1461 aa32.02■■■□□ 2.72
CMTM3-207ENST00000564060 CFAP74Q9C0B2 1584 aa32.01■■■□□ 2.71
CMTM3-207ENST00000564060 TTC37Q6PGP7 1564 aa32■■■□□ 2.71
CMTM3-207ENST00000564060 ARAP3Q8WWN8 1544 aa32■■■□□ 2.71
CMTM3-207ENST00000564060 KIF14Q15058 1648 aa31.98■■■□□ 2.71
CMTM3-207ENST00000564060 CEP162Q5TB80 1403 aa31.97■■■□□ 2.71
CMTM3-207ENST00000564060 TROQ12816 1431 aaPredicted RBP31.95■■■□□ 2.71
CMTM3-207ENST00000564060 MYO5CQ9NQX4 1742 aa31.94■■■□□ 2.7
CMTM3-207ENST00000564060 FANCAO15360 1455 aa31.89■■■□□ 2.7
CMTM3-207ENST00000564060 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
CMTM3-207ENST00000564060 PLCH2O75038 1416 aa31.83■■■□□ 2.69
CMTM3-207ENST00000564060 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
CMTM3-207ENST00000564060 LOC105371045A0A1W2PR82 267 aa31.79■■■□□ 2.68
CMTM3-207ENST00000564060 RICTORQ6R327 1708 aa31.78■■■□□ 2.68
CMTM3-207ENST00000564060 DENND4BO75064 1496 aaPredicted RBP31.76■■■□□ 2.67
CMTM3-207ENST00000564060 FRMPD1Q5SYB0 1578 aa31.76■■■□□ 2.67
CMTM3-207ENST00000564060 PREX2Q70Z35 1606 aa31.72■■■□□ 2.67
CMTM3-207ENST00000564060 ADGRL1O94910 1474 aa31.72■■■□□ 2.67
CMTM3-207ENST00000564060 ARHGAP5Q13017 1502 aa31.71■■■□□ 2.67
CMTM3-207ENST00000564060 RAPGEF3O95398 923 aa31.71■■■□□ 2.67
CMTM3-207ENST00000564060 CDC42BPBQ9Y5S2 1711 aa31.71■■■□□ 2.67
CMTM3-207ENST00000564060 EFCAB2Q5VUJ9 269 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms