RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 RUSC2Q8N2Y8 1516 aa32.53■■■□□ 2.8
CBFB-204ENST00000563939 TRHP20396 242 aaPredicted RBP32.5■■■□□ 2.79
CBFB-204ENST00000563939 SHROOM2Q13796 1616 aa32.5■■■□□ 2.79
CBFB-204ENST00000563939 KIAA0586Q9BVV6 1533 aa32.47■■■□□ 2.79
CBFB-204ENST00000563939 RAPGEF2Q9Y4G8 1499 aa32.36■■■□□ 2.77
CBFB-204ENST00000563939 TTBK1Q5TCY1 1321 aaPredicted RBP32.25■■■□□ 2.75
CBFB-204ENST00000563939 CSRNP3Q8WYN3 585 aa32.21■■■□□ 2.75
CBFB-204ENST00000563939 CARMIL2Q6F5E8 1435 aa32.19■■■□□ 2.74
CBFB-204ENST00000563939 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
CBFB-204ENST00000563939 NPM1P06748 294 aaKnown RBP eCLIP32.17■■■□□ 2.74
CBFB-204ENST00000563939 FAM9AQ8IZU1 332 aaPredicted RBP32.14■■■□□ 2.74
CBFB-204ENST00000563939 PTPRGP23470 1445 aa32.14■■■□□ 2.74
CBFB-204ENST00000563939 PRXQ9BXM0 1461 aa32.14■■■□□ 2.74
CBFB-204ENST00000563939 CHIC1Q5VXU3 224 aa32.13■■■□□ 2.73
CBFB-204ENST00000563939 TNIKQ9UKE5 1360 aa32.09■■■□□ 2.73
CBFB-204ENST00000563939 EEA1Q15075 1411 aa32.04■■■□□ 2.72
CBFB-204ENST00000563939 DISP1Q96F81 1524 aa32■■■□□ 2.71
CBFB-204ENST00000563939 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
CBFB-204ENST00000563939 ADCY10Q96PN6 1610 aa31.95■■■□□ 2.71
CBFB-204ENST00000563939 CTTNBP2Q8WZ74 1663 aa31.92■■■□□ 2.7
CBFB-204ENST00000563939 GOLGA3Q08378 1498 aa31.87■■■□□ 2.69
CBFB-204ENST00000563939 FAM69CQ0P6D2 419 aa31.87■■■□□ 2.69
CBFB-204ENST00000563939 UACAQ9BZF9 1416 aa31.86■■■□□ 2.69
CBFB-204ENST00000563939 KIAA0556O60303 1618 aa31.86■■■□□ 2.69
CBFB-204ENST00000563939 P3H3Q8IVL6 736 aa31.83■■■□□ 2.69
CBFB-204ENST00000563939 RANGAP1P46060 587 aaPredicted RBP31.81■■■□□ 2.68
CBFB-204ENST00000563939 EHMT2Q96KQ7 1210 aa31.8■■■□□ 2.68
CBFB-204ENST00000563939 MAPKBP1O60336 1514 aa31.8■■■□□ 2.68
CBFB-204ENST00000563939 ABCC2Q92887 1545 aa31.79■■■□□ 2.68
CBFB-204ENST00000563939 UHRF1BP1LA0JNW5 1464 aa31.78■■■□□ 2.68
CBFB-204ENST00000563939 ABCC10Q5T3U5 1492 aa31.76■■■□□ 2.67
CBFB-204ENST00000563939 UBTFP17480 764 aaKnown RBP31.69■■■□□ 2.66
CBFB-204ENST00000563939 PLB1Q6P1J6 1458 aa31.68■■■□□ 2.66
CBFB-204ENST00000563939 KIF13AQ9H1H9 1805 aa31.67■■■□□ 2.66
CBFB-204ENST00000563939 ASXL2Q76L83 1435 aa31.66■■■□□ 2.66
CBFB-204ENST00000563939 KIF21BO75037 1637 aa31.65■■■□□ 2.66
CBFB-204ENST00000563939 KDM5BQ9UGL1 1544 aa31.63■■■□□ 2.65
CBFB-204ENST00000563939 DIP2BQ9P265 1576 aa31.62■■■□□ 2.65
CBFB-204ENST00000563939 ARID3CA6NKF2 412 aa31.56■■■□□ 2.64
CBFB-204ENST00000563939 ABCA8O94911 1581 aa31.55■■■□□ 2.64
CBFB-204ENST00000563939 ZCCHC11Q5TAX3 1644 aaKnown RBP31.53■■■□□ 2.64
CBFB-204ENST00000563939 SAMD9Q5K651 1589 aa31.52■■■□□ 2.64
CBFB-204ENST00000563939 KCNH8Q96L42 1107 aa31.49■■■□□ 2.63
CBFB-204ENST00000563939 FHOD3Q2V2M9 1422 aa31.48■■■□□ 2.63
CBFB-204ENST00000563939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.44■■■□□ 2.62
CBFB-204ENST00000563939 HNRNPUL2Q1KMD3 747 aaKnown RBP31.44■■■□□ 2.62
CBFB-204ENST00000563939 EPRSP07814 1512 aaKnown RBP31.44■■■□□ 2.62
CBFB-204ENST00000563939 TSPOAP1O95153 1857 aa31.42■■■□□ 2.62
CBFB-204ENST00000563939 WDR7Q9Y4E6 1490 aa31.41■■■□□ 2.62
CBFB-204ENST00000563939 GLI2P10070 1586 aa31.4■■■□□ 2.62
CBFB-204ENST00000563939 ATP10BO94823 1461 aa31.39■■■□□ 2.62
CBFB-204ENST00000563939 EFCAB5A4FU69 1503 aa31.37■■■□□ 2.61
CBFB-204ENST00000563939 RAPGEF6Q8TEU7 1601 aa31.33■■■□□ 2.61
CBFB-204ENST00000563939 ATP1B4Q9UN42 357 aaPredicted RBP31.28■■■□□ 2.6
CBFB-204ENST00000563939 NUP153P49790 1475 aaKnown RBP31.26■■■□□ 2.59
CBFB-204ENST00000563939 KDM6BO15054 1643 aa31.24■■■□□ 2.59
CBFB-204ENST00000563939 CD109Q6YHK3 1445 aa31.24■■■□□ 2.59
CBFB-204ENST00000563939 ARHGAP35Q9NRY4 1499 aa31.23■■■□□ 2.59
CBFB-204ENST00000563939 PLEKHD1A6NEE1 506 aa31.22■■■□□ 2.59
CBFB-204ENST00000563939 MAP3K4Q9Y6R4 1608 aa31.22■■■□□ 2.59
CBFB-204ENST00000563939 TEX14Q8IWB6 1497 aa31.21■■■□□ 2.59
CBFB-204ENST00000563939 PPRC1Q5VV67 1664 aaKnown RBP31.19■■■□□ 2.58
CBFB-204ENST00000563939 FMN1Q68DA7 1419 aa31.17■■■□□ 2.58
CBFB-204ENST00000563939 MAGI3Q5TCQ9 1506 aa31.09■■■□□ 2.57
CBFB-204ENST00000563939 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
CBFB-204ENST00000563939 CFAP43Q8NDM7 1665 aa31.09■■■□□ 2.57
CBFB-204ENST00000563939 COL17A1Q9UMD9 1497 aaPredicted RBP31.08■■■□□ 2.57
CBFB-204ENST00000563939 CDK13Q14004 1512 aaKnown RBP31.02■■■□□ 2.56
CBFB-204ENST00000563939 CLIP1P30622 1438 aa31.01■■■□□ 2.55
CBFB-204ENST00000563939 CDK11AQ9UQ88 783 aaPredicted RBP31.01■■■□□ 2.55
CBFB-204ENST00000563939 ABCA9Q8IUA7 1624 aa30.98■■■□□ 2.55
CBFB-204ENST00000563939 HECW1Q76N89 1606 aa30.97■■■□□ 2.55
CBFB-204ENST00000563939 LOC105371045A0A1W2PR82 267 aa30.91■■■□□ 2.54
CBFB-204ENST00000563939 PHLDB1Q86UU1 1377 aa30.91■■■□□ 2.54
CBFB-204ENST00000563939 CASKIN1Q8WXD9 1431 aa30.89■■■□□ 2.53
CBFB-204ENST00000563939 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.85■■■□□ 2.53
CBFB-204ENST00000563939 ARAP3Q8WWN8 1544 aa30.84■■■□□ 2.53
CBFB-204ENST00000563939 NEO1Q92859 1461 aa30.83■■■□□ 2.53
CBFB-204ENST00000563939 RAPGEF3O95398 923 aa30.83■■■□□ 2.53
CBFB-204ENST00000563939 KDM4FA0A1W2PPD8 638 aa30.8■■■□□ 2.52
CBFB-204ENST00000563939 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
CBFB-204ENST00000563939 TROQ12816 1431 aaPredicted RBP30.79■■■□□ 2.52
CBFB-204ENST00000563939 CEP162Q5TB80 1403 aa30.78■■■□□ 2.52
CBFB-204ENST00000563939 CCDC18Q5T9S5 1454 aa30.76■■■□□ 2.52
CBFB-204ENST00000563939 TTC37Q6PGP7 1564 aa30.76■■■□□ 2.52
CBFB-204ENST00000563939 FANCAO15360 1455 aa30.76■■■□□ 2.51
CBFB-204ENST00000563939 FYCO1Q9BQS8 1478 aa30.75■■■□□ 2.51
CBFB-204ENST00000563939 AKNAQ7Z591 1439 aa30.74■■■□□ 2.51
CBFB-204ENST00000563939 PLCH2O75038 1416 aa30.73■■■□□ 2.51
CBFB-204ENST00000563939 EFCAB2Q5VUJ9 269 aa30.72■■■□□ 2.51
CBFB-204ENST00000563939 LRRIQ1Q96JM4 1722 aa30.71■■■□□ 2.51
CBFB-204ENST00000563939 KIF14Q15058 1648 aa30.67■■■□□ 2.5
CBFB-204ENST00000563939 DENND4BO75064 1496 aaPredicted RBP30.67■■■□□ 2.5
CBFB-204ENST00000563939 CFAP74Q9C0B2 1584 aa30.62■■■□□ 2.49
CBFB-204ENST00000563939 ADGRL1O94910 1474 aa30.61■■■□□ 2.49
CBFB-204ENST00000563939 SCAPERQ9BY12 1400 aa30.6■■■□□ 2.49
CBFB-204ENST00000563939 ARHGAP5Q13017 1502 aa30.56■■■□□ 2.48
CBFB-204ENST00000563939 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
CBFB-204ENST00000563939 FRMPD1Q5SYB0 1578 aa30.54■■■□□ 2.48
CBFB-204ENST00000563939 MTUS2Q5JR59 1369 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms