RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 NISCHQ9Y2I1 1504 aa46.76■■■■■ 5.08
CBFB-204ENST00000563939 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
CBFB-204ENST00000563939 ABCC9O60706 1549 aa41.17■■■■■ 4.18
CBFB-204ENST00000563939 DCAF8L2P0C7V8 631 aa39.55■■■■□ 3.92
CBFB-204ENST00000563939 RB1CC1Q8TDY2 1594 aa39.37■■■■□ 3.89
CBFB-204ENST00000563939 NACADO15069 1562 aa39.24■■■■□ 3.87
CBFB-204ENST00000563939 MYO15BQ96JP2 1530 aa38.84■■■■□ 3.81
CBFB-204ENST00000563939 ZCCHC6Q5VYS8 1495 aaKnown RBP38.84■■■■□ 3.81
CBFB-204ENST00000563939 DCAF1Q9Y4B6 1507 aa38.59■■■■□ 3.77
CBFB-204ENST00000563939 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
CBFB-204ENST00000563939 UNC13AQ9UPW8 1703 aa38.33■■■■□ 3.73
CBFB-204ENST00000563939 BICRAQ9NZM4 1560 aa38.14■■■■□ 3.7
CBFB-204ENST00000563939 DNAJC5BQ9UF47 199 aa38.11■■■■□ 3.69
CBFB-204ENST00000563939 SCRIBQ14160 1630 aa38.03■■■■□ 3.68
CBFB-204ENST00000563939 SHROOM4Q9ULL8 1493 aa37.65■■■■□ 3.62
CBFB-204ENST00000563939 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
CBFB-204ENST00000563939 CC2D2AQ9P2K1 1620 aa37.12■■■■□ 3.53
CBFB-204ENST00000563939 CECR2Q9BXF3 1484 aa36.99■■■■□ 3.51
CBFB-204ENST00000563939 SMARCA4P51532 1647 aa36.3■■■■□ 3.4
CBFB-204ENST00000563939 NCAPD3P42695 1498 aa36.26■■■■□ 3.4
CBFB-204ENST00000563939 ATAD2BQ9ULI0 1458 aa36.24■■■■□ 3.39
CBFB-204ENST00000563939 BAZ1AQ9NRL2 1556 aaPredicted RBP36.24■■■■□ 3.39
CBFB-204ENST00000563939 SMARCA2P51531 1590 aa36.15■■■■□ 3.38
CBFB-204ENST00000563939 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
CBFB-204ENST00000563939 HMGXB3Q12766 1538 aa35.96■■■■□ 3.35
CBFB-204ENST00000563939 BAZ1BQ9UIG0 1483 aaKnown RBP35.94■■■■□ 3.34
CBFB-204ENST00000563939 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
CBFB-204ENST00000563939 WIZO95785 1651 aa35.62■■■■□ 3.29
CBFB-204ENST00000563939 RSF1Q96T23 1441 aaPredicted RBP35.58■■■■□ 3.29
CBFB-204ENST00000563939 ERCC6Q03468 1493 aa35.52■■■■□ 3.28
CBFB-204ENST00000563939 NESP48681 1621 aa35.51■■■■□ 3.28
CBFB-204ENST00000563939 LAMC3Q9Y6N6 1575 aa35.29■■■■□ 3.24
CBFB-204ENST00000563939 CADPSQ9ULU8 1353 aa35.25■■■■□ 3.23
CBFB-204ENST00000563939 TOP2AP11388 1531 aaKnown RBP35.21■■■■□ 3.23
CBFB-204ENST00000563939 PDS5BQ9NTI5 1447 aa35.18■■■■□ 3.22
CBFB-204ENST00000563939 CUX2O14529 1486 aa35.13■■■■□ 3.21
CBFB-204ENST00000563939 KIF21AQ7Z4S6 1674 aa34.95■■■■□ 3.19
CBFB-204ENST00000563939 CFTRP13569 1480 aa34.91■■■■□ 3.18
CBFB-204ENST00000563939 CCDC88BA6NC98 1476 aa34.89■■■■□ 3.18
CBFB-204ENST00000563939 THOC2Q8NI27 1593 aaKnown RBP34.88■■■■□ 3.17
CBFB-204ENST00000563939 FANCD2Q9BXW9 1451 aa34.82■■■■□ 3.16
CBFB-204ENST00000563939 MRC2Q9UBG0 1479 aa34.78■■■■□ 3.16
CBFB-204ENST00000563939 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
CBFB-204ENST00000563939 SUPT5HO00267 1087 aaKnown RBP34.7■■■■□ 3.15
CBFB-204ENST00000563939 WDR62O43379 1518 aa34.6■■■■□ 3.13
CBFB-204ENST00000563939 DNAJC5Q9H3Z4 198 aa34.54■■■■□ 3.12
CBFB-204ENST00000563939 URB2Q14146 1524 aaKnown RBP34.45■■■■□ 3.11
CBFB-204ENST00000563939 PRDM2Q13029 1718 aa34.42■■■■□ 3.1
CBFB-204ENST00000563939 TOPBP1Q92547 1522 aa34.2■■■■□ 3.06
CBFB-204ENST00000563939 ABCC8Q09428 1581 aa34.19■■■■□ 3.06
CBFB-204ENST00000563939 DNMBPQ6XZF7 1577 aa34.09■■■■□ 3.05
CBFB-204ENST00000563939 IFT140Q96RY7 1462 aa34.07■■■■□ 3.04
CBFB-204ENST00000563939 ZNF608Q9ULD9 1512 aaPredicted RBP33.95■■■■□ 3.03
CBFB-204ENST00000563939 POLA1P09884 1462 aaPredicted RBP33.88■■■■□ 3.01
CBFB-204ENST00000563939 SOGA1O94964 1423 aa33.85■■■■□ 3.01
CBFB-204ENST00000563939 OSCARQ8IYS5 282 aa33.83■■■■□ 3.01
CBFB-204ENST00000563939 CUX1P39880 1505 aa33.83■■■■□ 3.01
CBFB-204ENST00000563939 RAD54L2Q9Y4B4 1467 aa33.82■■■■□ 3
CBFB-204ENST00000563939 AQRO60306 1485 aaKnown RBP eCLIP33.79■■■■□ 3
CBFB-204ENST00000563939 FGD5Q6ZNL6 1462 aa33.78■■■■□ 3
CBFB-204ENST00000563939 TARBP1Q13395 1621 aaKnown RBP33.78■■■■□ 3
CBFB-204ENST00000563939 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
CBFB-204ENST00000563939 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
CBFB-204ENST00000563939 FBLN2P98095 1184 aa33.6■■■□□ 2.97
CBFB-204ENST00000563939 WRNQ14191 1432 aaPredicted RBP eCLIP33.57■■■□□ 2.96
CBFB-204ENST00000563939 WDR97A6NE52 1622 aa33.43■■■□□ 2.94
CBFB-204ENST00000563939 GRIN2BQ13224 1484 aa33.42■■■□□ 2.94
CBFB-204ENST00000563939 TOP2BQ02880 1626 aa33.42■■■□□ 2.94
CBFB-204ENST00000563939 ABCA10Q8WWZ4 1543 aa33.41■■■□□ 2.94
CBFB-204ENST00000563939 SYNJ1O43426 1573 aa33.41■■■□□ 2.94
CBFB-204ENST00000563939 GAPVD1Q14C86 1478 aa33.4■■■□□ 2.94
CBFB-204ENST00000563939 SNAPC4Q5SXM2 1469 aa33.4■■■□□ 2.94
CBFB-204ENST00000563939 CHMP7Q8WUX9 453 aaPredicted RBP33.4■■■□□ 2.94
CBFB-204ENST00000563939 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
CBFB-204ENST00000563939 BIVM-ERCC5R4GMW8 1640 aa33.37■■■□□ 2.93
CBFB-204ENST00000563939 CHD1O14646 1710 aa33.32■■■□□ 2.92
CBFB-204ENST00000563939 MAGI1Q96QZ7 1491 aaPredicted RBP33.31■■■□□ 2.92
CBFB-204ENST00000563939 ABCA5Q8WWZ7 1642 aa33.22■■■□□ 2.91
CBFB-204ENST00000563939 SYNJ2O15056 1496 aa33.21■■■□□ 2.91
CBFB-204ENST00000563939 PBRM1Q86U86 1689 aa33.19■■■□□ 2.9
CBFB-204ENST00000563939 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
CBFB-204ENST00000563939 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
CBFB-204ENST00000563939 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
CBFB-204ENST00000563939 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
CBFB-204ENST00000563939 CYB5RLQ6IPT4 315 aa33.03■■■□□ 2.88
CBFB-204ENST00000563939 FHAD1B1AJZ9 1412 aa33■■■□□ 2.87
CBFB-204ENST00000563939 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
CBFB-204ENST00000563939 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
CBFB-204ENST00000563939 GRIN2AQ12879 1464 aa32.96■■■□□ 2.87
CBFB-204ENST00000563939 ADAMTS12P58397 1594 aa32.95■■■□□ 2.86
CBFB-204ENST00000563939 KIF27Q86VH2 1401 aa32.91■■■□□ 2.86
CBFB-204ENST00000563939 IGF1RP08069 1367 aa32.83■■■□□ 2.85
CBFB-204ENST00000563939 ARAP1Q96P48 1450 aa32.82■■■□□ 2.84
CBFB-204ENST00000563939 NUP160Q12769 1436 aa32.8■■■□□ 2.84
CBFB-204ENST00000563939 CEP170Q5SW79 1584 aa32.76■■■□□ 2.84
CBFB-204ENST00000563939 JPH4Q96JJ6 628 aa32.65■■■□□ 2.82
CBFB-204ENST00000563939 CARMIL1Q5VZK9 1371 aa32.65■■■□□ 2.82
CBFB-204ENST00000563939 CUL7Q14999 1698 aa32.59■■■□□ 2.81
CBFB-204ENST00000563939 ERCC6L2Q5T890 1561 aa32.55■■■□□ 2.8
CBFB-204ENST00000563939 PRG4Q92954 1404 aaPredicted RBP32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms