RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 EHMT2Q96KQ7 1210 aa31.46■■■□□ 2.63
SPSB3-204ENST00000563741 CEP170Q5SW79 1584 aa31.45■■■□□ 2.63
SPSB3-204ENST00000563741 CUL7Q14999 1698 aa31.45■■■□□ 2.63
SPSB3-204ENST00000563741 GOLGA3Q08378 1498 aa31.43■■■□□ 2.62
SPSB3-204ENST00000563741 RAPGEF2Q9Y4G8 1499 aa31.42■■■□□ 2.62
SPSB3-204ENST00000563741 CARMIL1Q5VZK9 1371 aa31.38■■■□□ 2.61
SPSB3-204ENST00000563741 ARAP1Q96P48 1450 aa31.33■■■□□ 2.61
SPSB3-204ENST00000563741 CYB5RLQ6IPT4 315 aa31.32■■■□□ 2.61
SPSB3-204ENST00000563741 SHROOM2Q13796 1616 aa31.26■■■□□ 2.6
SPSB3-204ENST00000563741 TNIKQ9UKE5 1360 aa31.24■■■□□ 2.59
SPSB3-204ENST00000563741 UBTFP17480 764 aaKnown RBP31.24■■■□□ 2.59
SPSB3-204ENST00000563741 JPH4Q96JJ6 628 aa31.18■■■□□ 2.58
SPSB3-204ENST00000563741 KIAA0586Q9BVV6 1533 aa31.17■■■□□ 2.58
SPSB3-204ENST00000563741 ERCC6L2Q5T890 1561 aa31.16■■■□□ 2.58
SPSB3-204ENST00000563741 PRG4Q92954 1404 aaPredicted RBP31.11■■■□□ 2.57
SPSB3-204ENST00000563741 CEP162Q5TB80 1403 aa31.06■■■□□ 2.56
SPSB3-204ENST00000563741 IQGAP2Q13576 1575 aa30.98■■■□□ 2.55
SPSB3-204ENST00000563741 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
SPSB3-204ENST00000563741 CLIP1P30622 1438 aa30.91■■■□□ 2.54
SPSB3-204ENST00000563741 CARMIL2Q6F5E8 1435 aa30.84■■■□□ 2.53
SPSB3-204ENST00000563741 RANGAP1P46060 587 aaPredicted RBP30.84■■■□□ 2.53
SPSB3-204ENST00000563741 UGGT2Q9NYU1 1516 aa30.81■■■□□ 2.52
SPSB3-204ENST00000563741 ARHGAP35Q9NRY4 1499 aa30.75■■■□□ 2.51
SPSB3-204ENST00000563741 DISP1Q96F81 1524 aa30.75■■■□□ 2.51
SPSB3-204ENST00000563741 PTPRGP23470 1445 aa30.74■■■□□ 2.51
SPSB3-204ENST00000563741 TRHP20396 242 aaPredicted RBP30.73■■■□□ 2.51
SPSB3-204ENST00000563741 EFCAB5A4FU69 1503 aa30.68■■■□□ 2.5
SPSB3-204ENST00000563741 KIAA0556O60303 1618 aa30.67■■■□□ 2.5
SPSB3-204ENST00000563741 ADCY10Q96PN6 1610 aa30.66■■■□□ 2.5
SPSB3-204ENST00000563741 TTBK1Q5TCY1 1321 aaPredicted RBP30.65■■■□□ 2.5
SPSB3-204ENST00000563741 SAMD9Q5K651 1589 aa30.64■■■□□ 2.5
SPSB3-204ENST00000563741 NPM1P06748 294 aaKnown RBP eCLIP30.61■■■□□ 2.49
SPSB3-204ENST00000563741 VPS8Q8N3P4 1428 aa30.59■■■□□ 2.49
SPSB3-204ENST00000563741 FHOD3Q2V2M9 1422 aa30.55■■■□□ 2.48
SPSB3-204ENST00000563741 P3H3Q8IVL6 736 aa30.53■■■□□ 2.48
SPSB3-204ENST00000563741 UACAQ9BZF9 1416 aa30.52■■■□□ 2.48
SPSB3-204ENST00000563741 UHRF1BP1LA0JNW5 1464 aa30.51■■■□□ 2.48
SPSB3-204ENST00000563741 MAPKBP1O60336 1514 aa30.48■■■□□ 2.47
SPSB3-204ENST00000563741 ABCC2Q92887 1545 aa30.47■■■□□ 2.47
SPSB3-204ENST00000563741 KIF13AQ9H1H9 1805 aa30.39■■■□□ 2.46
SPSB3-204ENST00000563741 FMN1Q68DA7 1419 aa30.39■■■□□ 2.46
SPSB3-204ENST00000563741 PLB1Q6P1J6 1458 aa30.37■■■□□ 2.45
SPSB3-204ENST00000563741 KDM5BQ9UGL1 1544 aa30.35■■■□□ 2.45
SPSB3-204ENST00000563741 ABCA8O94911 1581 aa30.35■■■□□ 2.45
SPSB3-204ENST00000563741 ABCC10Q5T3U5 1492 aa30.35■■■□□ 2.45
SPSB3-204ENST00000563741 PCF11O94913 1555 aaKnown RBP30.34■■■□□ 2.45
SPSB3-204ENST00000563741 ZCCHC11Q5TAX3 1644 aaKnown RBP30.3■■■□□ 2.44
SPSB3-204ENST00000563741 FAM69CQ0P6D2 419 aa30.3■■■□□ 2.44
SPSB3-204ENST00000563741 DIP2BQ9P265 1576 aa30.29■■■□□ 2.44
SPSB3-204ENST00000563741 ASXL2Q76L83 1435 aa30.28■■■□□ 2.44
SPSB3-204ENST00000563741 CASKIN1Q8WXD9 1431 aa30.28■■■□□ 2.44
SPSB3-204ENST00000563741 FYCO1Q9BQS8 1478 aa30.28■■■□□ 2.44
SPSB3-204ENST00000563741 RAPGEF6Q8TEU7 1601 aa30.18■■■□□ 2.42
SPSB3-204ENST00000563741 APLP2Q06481 763 aa30.16■■■□□ 2.42
SPSB3-204ENST00000563741 PPARGC1BQ86YN6 1023 aaKnown RBP30.13■■■□□ 2.41
SPSB3-204ENST00000563741 GLI2P10070 1586 aa30.13■■■□□ 2.41
SPSB3-204ENST00000563741 MAP3K1Q13233 1512 aa30.13■■■□□ 2.41
SPSB3-204ENST00000563741 HECW1Q76N89 1606 aa30.12■■■□□ 2.41
SPSB3-204ENST00000563741 TIAM1Q13009 1591 aa30.11■■■□□ 2.41
SPSB3-204ENST00000563741 ATP1B4Q9UN42 357 aaPredicted RBP30.11■■■□□ 2.41
SPSB3-204ENST00000563741 WDR7Q9Y4E6 1490 aa30.11■■■□□ 2.41
SPSB3-204ENST00000563741 ATP10BO94823 1461 aa30.11■■■□□ 2.41
SPSB3-204ENST00000563741 EPRSP07814 1512 aaKnown RBP30.1■■■□□ 2.41
SPSB3-204ENST00000563741 TSPOAP1O95153 1857 aa30.09■■■□□ 2.41
SPSB3-204ENST00000563741 CFAP43Q8NDM7 1665 aa30.08■■■□□ 2.41
SPSB3-204ENST00000563741 ARID3CA6NKF2 412 aa30.08■■■□□ 2.41
SPSB3-204ENST00000563741 LRRIQ1Q96JM4 1722 aa30.06■■■□□ 2.4
SPSB3-204ENST00000563741 NUP153P49790 1475 aaKnown RBP30.06■■■□□ 2.4
SPSB3-204ENST00000563741 CCDC18Q5T9S5 1454 aa30.03■■■□□ 2.4
SPSB3-204ENST00000563741 KANK4Q5T7N3 995 aaPredicted RBP30.02■■■□□ 2.4
SPSB3-204ENST00000563741 MAP3K4Q9Y6R4 1608 aa29.99■■■□□ 2.39
SPSB3-204ENST00000563741 KCNH8Q96L42 1107 aa29.99■■■□□ 2.39
SPSB3-204ENST00000563741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.98■■■□□ 2.39
SPSB3-204ENST00000563741 HNRNPUL2Q1KMD3 747 aaKnown RBP29.98■■■□□ 2.39
SPSB3-204ENST00000563741 LRRC9Q6ZRR7 1453 aa29.97■■■□□ 2.39
SPSB3-204ENST00000563741 CDK13Q14004 1512 aaKnown RBP29.97■■■□□ 2.39
SPSB3-204ENST00000563741 PPRC1Q5VV67 1664 aaKnown RBP29.95■■■□□ 2.38
SPSB3-204ENST00000563741 TEX14Q8IWB6 1497 aa29.86■■■□□ 2.37
SPSB3-204ENST00000563741 MAGI3Q5TCQ9 1506 aa29.86■■■□□ 2.37
SPSB3-204ENST00000563741 PLEKHD1A6NEE1 506 aa29.85■■■□□ 2.37
SPSB3-204ENST00000563741 CD109Q6YHK3 1445 aa29.85■■■□□ 2.37
SPSB3-204ENST00000563741 KDM6BO15054 1643 aa29.85■■■□□ 2.37
SPSB3-204ENST00000563741 MTUS2Q5JR59 1369 aa29.84■■■□□ 2.37
SPSB3-204ENST00000563741 EHBP1L1Q8N3D4 1523 aa29.83■■■□□ 2.37
SPSB3-204ENST00000563741 ABCA9Q8IUA7 1624 aa29.8■■■□□ 2.36
SPSB3-204ENST00000563741 TRIM26Q12899 539 aaPredicted RBP29.79■■■□□ 2.36
SPSB3-204ENST00000563741 CDK11AQ9UQ88 783 aaPredicted RBP29.73■■■□□ 2.35
SPSB3-204ENST00000563741 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
SPSB3-204ENST00000563741 SUPT6HQ7KZ85 1726 aaKnown RBP29.69■■■□□ 2.34
SPSB3-204ENST00000563741 NCOA2Q15596 1464 aa29.68■■■□□ 2.34
SPSB3-204ENST00000563741 PHLDB1Q86UU1 1377 aa29.68■■■□□ 2.34
SPSB3-204ENST00000563741 PCGF6Q9BYE7 350 aa29.66■■■□□ 2.34
SPSB3-204ENST00000563741 COL17A1Q9UMD9 1497 aaPredicted RBP29.66■■■□□ 2.34
SPSB3-204ENST00000563741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.64■■■□□ 2.34
SPSB3-204ENST00000563741 RRBP1Q9P2E9 1410 aaKnown RBP29.6■■■□□ 2.33
SPSB3-204ENST00000563741 TTC37Q6PGP7 1564 aa29.6■■■□□ 2.33
SPSB3-204ENST00000563741 KIF14Q15058 1648 aa29.58■■■□□ 2.33
SPSB3-204ENST00000563741 NEO1Q92859 1461 aa29.57■■■□□ 2.32
SPSB3-204ENST00000563741 ARAP3Q8WWN8 1544 aa29.56■■■□□ 2.32
SPSB3-204ENST00000563741 MYOM3Q5VTT5 1437 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms