RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 RAPGEF2Q9Y4G8 1499 aa21.52■■□□□ 1.04
GSE1-212ENST00000562659 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
GSE1-212ENST00000562659 ADRA2BP18089 450 aa21.49■■□□□ 1.03
GSE1-212ENST00000562659 NUP160Q12769 1436 aa21.47■■□□□ 1.03
GSE1-212ENST00000562659 CHD1O14646 1710 aa21.41■■□□□ 1.02
GSE1-212ENST00000562659 KIF21BO75037 1637 aa21.4■■□□□ 1.02
GSE1-212ENST00000562659 KIAA0586Q9BVV6 1533 aa21.36■■□□□ 1.01
GSE1-212ENST00000562659 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
GSE1-212ENST00000562659 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
GSE1-212ENST00000562659 GOLGA3Q08378 1498 aa21.32■■□□□ 1
GSE1-212ENST00000562659 JPH4Q96JJ6 628 aa21.27■■□□□ 1
GSE1-212ENST00000562659 DNAJC5Q9H3Z4 198 aa21.27■■□□□ 1
GSE1-212ENST00000562659 UBTFP17480 764 aaKnown RBP21.23■□□□□ 0.99
GSE1-212ENST00000562659 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
GSE1-212ENST00000562659 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
GSE1-212ENST00000562659 TNIKQ9UKE5 1360 aa21.18■□□□□ 0.98
GSE1-212ENST00000562659 UGGT2Q9NYU1 1516 aa21.17■□□□□ 0.98
GSE1-212ENST00000562659 PRG4Q92954 1404 aaPredicted RBP21.14■□□□□ 0.98
GSE1-212ENST00000562659 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
GSE1-212ENST00000562659 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
GSE1-212ENST00000562659 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
GSE1-212ENST00000562659 ARHGEF11O15085 1522 aa21.09■□□□□ 0.97
GSE1-212ENST00000562659 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
GSE1-212ENST00000562659 DISP1Q96F81 1524 aa21.07■□□□□ 0.96
GSE1-212ENST00000562659 EFCAB5A4FU69 1503 aa21.02■□□□□ 0.96
GSE1-212ENST00000562659 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
GSE1-212ENST00000562659 RIMBP3CA6NJZ7 1639 aa20.99■□□□□ 0.95
GSE1-212ENST00000562659 RIMBP3BA6NNM3 1639 aa20.99■□□□□ 0.95
GSE1-212ENST00000562659 RIMBP3Q9UFD9 1639 aa20.99■□□□□ 0.95
GSE1-212ENST00000562659 SAMD9Q5K651 1589 aa20.98■□□□□ 0.95
GSE1-212ENST00000562659 KIAA0556O60303 1618 aa20.98■□□□□ 0.95
GSE1-212ENST00000562659 PTPRGP23470 1445 aa20.97■□□□□ 0.95
GSE1-212ENST00000562659 CLIP1P30622 1438 aa20.95■□□□□ 0.95
GSE1-212ENST00000562659 ARAP1Q96P48 1450 aa20.95■□□□□ 0.94
GSE1-212ENST00000562659 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
GSE1-212ENST00000562659 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
GSE1-212ENST00000562659 RANGAP1P46060 587 aaPredicted RBP20.92■□□□□ 0.94
GSE1-212ENST00000562659 CYB5RLQ6IPT4 315 aa20.9■□□□□ 0.94
GSE1-212ENST00000562659 P3H3Q8IVL6 736 aa20.89■□□□□ 0.93
GSE1-212ENST00000562659 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
GSE1-212ENST00000562659 FMN1Q68DA7 1419 aa20.86■□□□□ 0.93
GSE1-212ENST00000562659 UACAQ9BZF9 1416 aa20.84■□□□□ 0.93
GSE1-212ENST00000562659 UHRF1BP1LA0JNW5 1464 aa20.83■□□□□ 0.93
GSE1-212ENST00000562659 TTBK1Q5TCY1 1321 aaPredicted RBP20.78■□□□□ 0.92
GSE1-212ENST00000562659 ABCA8O94911 1581 aa20.77■□□□□ 0.92
GSE1-212ENST00000562659 PLB1Q6P1J6 1458 aa20.77■□□□□ 0.92
GSE1-212ENST00000562659 ABCC2Q92887 1545 aa20.76■□□□□ 0.91
GSE1-212ENST00000562659 CASKIN1Q8WXD9 1431 aa20.72■□□□□ 0.91
GSE1-212ENST00000562659 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
GSE1-212ENST00000562659 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
GSE1-212ENST00000562659 ADCY10Q96PN6 1610 aa20.69■□□□□ 0.9
GSE1-212ENST00000562659 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
GSE1-212ENST00000562659 RAPGEF6Q8TEU7 1601 aa20.68■□□□□ 0.9
GSE1-212ENST00000562659 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
GSE1-212ENST00000562659 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
GSE1-212ENST00000562659 ATP10BO94823 1461 aa20.63■□□□□ 0.89
GSE1-212ENST00000562659 HECW1Q76N89 1606 aa20.61■□□□□ 0.89
GSE1-212ENST00000562659 MAPKBP1O60336 1514 aa20.59■□□□□ 0.89
GSE1-212ENST00000562659 EPRSP07814 1512 aaKnown RBP20.59■□□□□ 0.89
GSE1-212ENST00000562659 CCDC18Q5T9S5 1454 aa20.59■□□□□ 0.89
GSE1-212ENST00000562659 PCF11O94913 1555 aaKnown RBP20.58■□□□□ 0.88
GSE1-212ENST00000562659 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
GSE1-212ENST00000562659 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
GSE1-212ENST00000562659 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
GSE1-212ENST00000562659 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
GSE1-212ENST00000562659 ZCCHC11Q5TAX3 1644 aaKnown RBP20.53■□□□□ 0.88
GSE1-212ENST00000562659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.52■□□□□ 0.88
GSE1-212ENST00000562659 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
GSE1-212ENST00000562659 MAP3K1Q13233 1512 aa20.52■□□□□ 0.87
GSE1-212ENST00000562659 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
GSE1-212ENST00000562659 WDR7Q9Y4E6 1490 aa20.5■□□□□ 0.87
GSE1-212ENST00000562659 CDK13Q14004 1512 aaKnown RBP20.48■□□□□ 0.87
GSE1-212ENST00000562659 APLP2Q06481 763 aa20.46■□□□□ 0.87
GSE1-212ENST00000562659 ABCC10Q5T3U5 1492 aa20.45■□□□□ 0.86
GSE1-212ENST00000562659 TROQ12816 1431 aaPredicted RBP20.44■□□□□ 0.86
GSE1-212ENST00000562659 TIAM1Q13009 1591 aa20.4■□□□□ 0.86
GSE1-212ENST00000562659 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
GSE1-212ENST00000562659 GLI2P10070 1586 aa20.38■□□□□ 0.85
GSE1-212ENST00000562659 FAM69CQ0P6D2 419 aa20.38■□□□□ 0.85
GSE1-212ENST00000562659 KCNH8Q96L42 1107 aa20.38■□□□□ 0.85
GSE1-212ENST00000562659 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
GSE1-212ENST00000562659 LRRC9Q6ZRR7 1453 aa20.37■□□□□ 0.85
GSE1-212ENST00000562659 MAGI3Q5TCQ9 1506 aa20.35■□□□□ 0.85
GSE1-212ENST00000562659 CFAP43Q8NDM7 1665 aa20.35■□□□□ 0.85
GSE1-212ENST00000562659 DIP2BQ9P265 1576 aa20.34■□□□□ 0.85
GSE1-212ENST00000562659 EHBP1L1Q8N3D4 1523 aa20.34■□□□□ 0.85
GSE1-212ENST00000562659 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.85
GSE1-212ENST00000562659 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
GSE1-212ENST00000562659 KIF14Q15058 1648 aa20.29■□□□□ 0.84
GSE1-212ENST00000562659 CD109Q6YHK3 1445 aa20.28■□□□□ 0.84
GSE1-212ENST00000562659 ABCA9Q8IUA7 1624 aa20.28■□□□□ 0.84
GSE1-212ENST00000562659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.27■□□□□ 0.84
GSE1-212ENST00000562659 PLCH2O75038 1416 aa20.25■□□□□ 0.83
GSE1-212ENST00000562659 ARAP3Q8WWN8 1544 aa20.23■□□□□ 0.83
GSE1-212ENST00000562659 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
GSE1-212ENST00000562659 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
GSE1-212ENST00000562659 MAP3K4Q9Y6R4 1608 aa20.22■□□□□ 0.83
GSE1-212ENST00000562659 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
GSE1-212ENST00000562659 TEX14Q8IWB6 1497 aa20.2■□□□□ 0.82
GSE1-212ENST00000562659 KIF13AQ9H1H9 1805 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms