RNA–Protein interactions for RNA: ENST00000562659.1

GSE1-212, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 756 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-212ENST00000562659 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
GSE1-212ENST00000562659 AEBP2Q6ZN18 517 aaPredicted RBP29.3■■■□□ 2.28
GSE1-212ENST00000562659 CHIC1Q5VXU3 224 aa27.44■■□□□ 1.98
GSE1-212ENST00000562659 CCDC180Q9P1Z9 1646 aa27.27■■□□□ 1.96
GSE1-212ENST00000562659 ABCC9O60706 1549 aa26.29■■□□□ 1.8
GSE1-212ENST00000562659 ZCCHC6Q5VYS8 1495 aaKnown RBP25.85■■□□□ 1.73
GSE1-212ENST00000562659 MYO15BQ96JP2 1530 aa25.71■■□□□ 1.71
GSE1-212ENST00000562659 DCAF1Q9Y4B6 1507 aa25.7■■□□□ 1.7
GSE1-212ENST00000562659 NACADO15069 1562 aa25.64■■□□□ 1.69
GSE1-212ENST00000562659 DCAF8L2P0C7V8 631 aa25.61■■□□□ 1.69
GSE1-212ENST00000562659 RB1CC1Q8TDY2 1594 aa25.52■■□□□ 1.68
GSE1-212ENST00000562659 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
GSE1-212ENST00000562659 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
GSE1-212ENST00000562659 UNC13AQ9UPW8 1703 aa24.74■■□□□ 1.55
GSE1-212ENST00000562659 BICRAQ9NZM4 1560 aa24.7■■□□□ 1.54
GSE1-212ENST00000562659 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
GSE1-212ENST00000562659 SHROOM4Q9ULL8 1493 aa24.65■■□□□ 1.54
GSE1-212ENST00000562659 PHF23Q9BUL5 403 aaPredicted RBP24.65■■□□□ 1.54
GSE1-212ENST00000562659 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
GSE1-212ENST00000562659 CECR2Q9BXF3 1484 aa24■■□□□ 1.43
GSE1-212ENST00000562659 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
GSE1-212ENST00000562659 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
GSE1-212ENST00000562659 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
GSE1-212ENST00000562659 CC2D2AQ9P2K1 1620 aa23.81■■□□□ 1.4
GSE1-212ENST00000562659 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
GSE1-212ENST00000562659 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
GSE1-212ENST00000562659 ATAD2BQ9ULI0 1458 aa23.72■■□□□ 1.39
GSE1-212ENST00000562659 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
GSE1-212ENST00000562659 NCAPD3P42695 1498 aa23.7■■□□□ 1.38
GSE1-212ENST00000562659 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
GSE1-212ENST00000562659 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
GSE1-212ENST00000562659 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
GSE1-212ENST00000562659 WIZO95785 1651 aa23.47■■□□□ 1.35
GSE1-212ENST00000562659 FOXD1Q16676 465 aa23.39■■□□□ 1.33
GSE1-212ENST00000562659 TOP2AP11388 1531 aaKnown RBP23.35■■□□□ 1.33
GSE1-212ENST00000562659 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
GSE1-212ENST00000562659 CCDC88BA6NC98 1476 aa23.09■■□□□ 1.29
GSE1-212ENST00000562659 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
GSE1-212ENST00000562659 CFTRP13569 1480 aa22.95■■□□□ 1.26
GSE1-212ENST00000562659 LAMC3Q9Y6N6 1575 aa22.93■■□□□ 1.26
GSE1-212ENST00000562659 NESP48681 1621 aa22.86■■□□□ 1.25
GSE1-212ENST00000562659 PDS5BQ9NTI5 1447 aa22.83■■□□□ 1.25
GSE1-212ENST00000562659 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
GSE1-212ENST00000562659 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
GSE1-212ENST00000562659 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
GSE1-212ENST00000562659 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
GSE1-212ENST00000562659 MRC2Q9UBG0 1479 aa22.52■■□□□ 1.2
GSE1-212ENST00000562659 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
GSE1-212ENST00000562659 ABCC8Q09428 1581 aa22.47■■□□□ 1.19
GSE1-212ENST00000562659 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
GSE1-212ENST00000562659 WDR62O43379 1518 aa22.42■■□□□ 1.18
GSE1-212ENST00000562659 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
GSE1-212ENST00000562659 CUX2O14529 1486 aa22.38■■□□□ 1.17
GSE1-212ENST00000562659 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
GSE1-212ENST00000562659 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
GSE1-212ENST00000562659 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
GSE1-212ENST00000562659 CUX1P39880 1505 aa22.31■■□□□ 1.16
GSE1-212ENST00000562659 TOP2BQ02880 1626 aa22.22■■□□□ 1.15
GSE1-212ENST00000562659 POLA1P09884 1462 aaPredicted RBP22.19■■□□□ 1.14
GSE1-212ENST00000562659 BIVM-ERCC5R4GMW8 1640 aa22.17■■□□□ 1.14
GSE1-212ENST00000562659 SYNJ1O43426 1573 aa22.17■■□□□ 1.14
GSE1-212ENST00000562659 FGD5Q6ZNL6 1462 aa22.17■■□□□ 1.14
GSE1-212ENST00000562659 IFT140Q96RY7 1462 aa22.17■■□□□ 1.14
GSE1-212ENST00000562659 POTEDQ86YR6 584 aa22.16■■□□□ 1.14
GSE1-212ENST00000562659 SOGA1O94964 1423 aa22.14■■□□□ 1.14
GSE1-212ENST00000562659 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
GSE1-212ENST00000562659 RAD54L2Q9Y4B4 1467 aa22.05■■□□□ 1.12
GSE1-212ENST00000562659 TARBP1Q13395 1621 aaKnown RBP22.05■■□□□ 1.12
GSE1-212ENST00000562659 ABCA10Q8WWZ4 1543 aa22.04■■□□□ 1.12
GSE1-212ENST00000562659 MSH5O43196 834 aa22.02■■□□□ 1.12
GSE1-212ENST00000562659 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
GSE1-212ENST00000562659 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
GSE1-212ENST00000562659 TDRD9Q8NDG6 1382 aaKnown RBP21.94■■□□□ 1.1
GSE1-212ENST00000562659 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.15e-8■■■■■ 61.1
GSE1-212ENST00000562659 KIF27Q86VH2 1401 aa21.89■■□□□ 1.09
GSE1-212ENST00000562659 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
GSE1-212ENST00000562659 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
GSE1-212ENST00000562659 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
GSE1-212ENST00000562659 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
GSE1-212ENST00000562659 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
GSE1-212ENST00000562659 IGF1RP08069 1367 aa21.77■■□□□ 1.08
GSE1-212ENST00000562659 PIAS4Q8N2W9 510 aaPredicted RBP21.77■■□□□ 1.08
GSE1-212ENST00000562659 EEA1Q15075 1411 aa21.77■■□□□ 1.08
GSE1-212ENST00000562659 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
GSE1-212ENST00000562659 PLPPR3Q6T4P5 718 aa21.74■■□□□ 1.07
GSE1-212ENST00000562659 SNAPC4Q5SXM2 1469 aa21.7■■□□□ 1.06
GSE1-212ENST00000562659 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
GSE1-212ENST00000562659 RUSC2Q8N2Y8 1516 aa21.68■■□□□ 1.06
GSE1-212ENST00000562659 SYNJ2O15056 1496 aa21.65■■□□□ 1.06
GSE1-212ENST00000562659 CSRNP3Q8WYN3 585 aa21.65■■□□□ 1.06
GSE1-212ENST00000562659 PBRM1Q86U86 1689 aa21.64■■□□□ 1.05
GSE1-212ENST00000562659 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
GSE1-212ENST00000562659 CHMP7Q8WUX9 453 aaPredicted RBP21.62■■□□□ 1.05
GSE1-212ENST00000562659 ADAMTS12P58397 1594 aa21.6■■□□□ 1.05
GSE1-212ENST00000562659 PPP6R1Q9UPN7 881 aa21.58■■□□□ 1.05
GSE1-212ENST00000562659 CUL7Q14999 1698 aa21.58■■□□□ 1.05
GSE1-212ENST00000562659 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
GSE1-212ENST00000562659 FBLN2P98095 1184 aa21.55■■□□□ 1.04
GSE1-212ENST00000562659 GRIN2AQ12879 1464 aa21.54■■□□□ 1.04
GSE1-212ENST00000562659 OSCARQ8IYS5 282 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms