RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 EEA1Q15075 1411 aa10.01□□□□□ -0.81
LINC02249-202ENST00000562624 GOLGA3Q08378 1498 aa10□□□□□ -0.81
LINC02249-202ENST00000562624 PLEKHD1A6NEE1 506 aa9.99□□□□□ -0.81
LINC02249-202ENST00000562624 IFT140Q96RY7 1462 aa9.98□□□□□ -0.81
LINC02249-202ENST00000562624 YTHDC1Q96MU7 727 aaKnown RBP9.97□□□□□ -0.81
LINC02249-202ENST00000562624 GTF3C3Q9Y5Q9 886 aa9.97□□□□□ -0.81
LINC02249-202ENST00000562624 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
LINC02249-202ENST00000562624 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
LINC02249-202ENST00000562624 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
LINC02249-202ENST00000562624 GRIN2BQ13224 1484 aa9.95□□□□□ -0.82
LINC02249-202ENST00000562624 CEP162Q5TB80 1403 aa9.95□□□□□ -0.82
LINC02249-202ENST00000562624 MTUS2Q5JR59 1369 aa9.95□□□□□ -0.82
LINC02249-202ENST00000562624 CHIC2Q9UKJ5 165 aa9.95□□□□□ -0.82
LINC02249-202ENST00000562624 SNAPC4Q5SXM2 1469 aa9.94□□□□□ -0.82
LINC02249-202ENST00000562624 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
LINC02249-202ENST00000562624 TRIM52Q96A61 297 aa9.93□□□□□ -0.82
LINC02249-202ENST00000562624 CARMIL2Q6F5E8 1435 aa9.93□□□□□ -0.82
LINC02249-202ENST00000562624 SCAF1Q9H7N4 1312 aaKnown RBP9.92□□□□□ -0.82
LINC02249-202ENST00000562624 FHOD3Q2V2M9 1422 aa9.91□□□□□ -0.82
LINC02249-202ENST00000562624 TNIKQ9UKE5 1360 aa9.9□□□□□ -0.82
LINC02249-202ENST00000562624 FHAD1B1AJZ9 1412 aa9.89□□□□□ -0.83
LINC02249-202ENST00000562624 TOP2BQ02880 1626 aa9.89□□□□□ -0.83
LINC02249-202ENST00000562624 PTPRGP23470 1445 aa9.88□□□□□ -0.83
LINC02249-202ENST00000562624 ARID4BQ4LE39 1312 aaPredicted RBP9.87□□□□□ -0.83
LINC02249-202ENST00000562624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC02249-202ENST00000562624 ESF1Q9H501 851 aaKnown RBP9.86□□□□□ -0.83
LINC02249-202ENST00000562624 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
LINC02249-202ENST00000562624 CFDP1Q9UEE9 299 aaPredicted RBP9.86□□□□□ -0.83
LINC02249-202ENST00000562624 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
LINC02249-202ENST00000562624 PRG4Q92954 1404 aaPredicted RBP9.85□□□□□ -0.83
LINC02249-202ENST00000562624 NEFLP07196 543 aa9.84□□□□□ -0.83
LINC02249-202ENST00000562624 ABCA10Q8WWZ4 1543 aa9.84□□□□□ -0.83
LINC02249-202ENST00000562624 MLECQ14165 292 aa9.84□□□□□ -0.83
LINC02249-202ENST00000562624 TSPY4P0CV99 314 aa9.83□□□□□ -0.84
LINC02249-202ENST00000562624 TSPY10P0CW01 314 aa9.83□□□□□ -0.84
LINC02249-202ENST00000562624 FAM69CQ0P6D2 419 aa9.83□□□□□ -0.84
LINC02249-202ENST00000562624 KANK4Q5T7N3 995 aaPredicted RBP9.82□□□□□ -0.84
LINC02249-202ENST00000562624 RRP7BPQ9NSQ0 103 aa9.81□□□□□ -0.84
LINC02249-202ENST00000562624 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
LINC02249-202ENST00000562624 NEUROD1Q13562 356 aa9.79□□□□□ -0.84
LINC02249-202ENST00000562624 SYNJ2O15056 1496 aa9.78□□□□□ -0.84
LINC02249-202ENST00000562624 BCANQ96GW7 911 aa9.78□□□□□ -0.84
LINC02249-202ENST00000562624 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
LINC02249-202ENST00000562624 WDR62O43379 1518 aa9.77□□□□□ -0.85
LINC02249-202ENST00000562624 ZNF326Q5BKZ1 582 aaKnown RBP9.77□□□□□ -0.85
LINC02249-202ENST00000562624 GRIN2AQ12879 1464 aa9.76□□□□□ -0.85
LINC02249-202ENST00000562624 CCNB3Q8WWL7 1395 aa9.75□□□□□ -0.85
LINC02249-202ENST00000562624 FMN1Q68DA7 1419 aa9.75□□□□□ -0.85
LINC02249-202ENST00000562624 MAGI1Q96QZ7 1491 aaPredicted RBP9.74□□□□□ -0.85
LINC02249-202ENST00000562624 POLR3GLQ9BT43 218 aa9.73□□□□□ -0.85
LINC02249-202ENST00000562624 HNRNPMP52272 730 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC02249-202ENST00000562624 STAG3Q9UJ98 1225 aa9.73□□□□□ -0.85
LINC02249-202ENST00000562624 PRXQ9BXM0 1461 aa9.72□□□□□ -0.85
LINC02249-202ENST00000562624 EIF4G3O43432 1585 aaKnown RBP9.72□□□□□ -0.85
LINC02249-202ENST00000562624 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.85
LINC02249-202ENST00000562624 GGT6Q6P531 493 aa9.71□□□□□ -0.85
LINC02249-202ENST00000562624 EFCAB2Q5VUJ9 269 aa9.71□□□□□ -0.86
LINC02249-202ENST00000562624 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
LINC02249-202ENST00000562624 KIAA0586Q9BVV6 1533 aa9.7□□□□□ -0.86
LINC02249-202ENST00000562624 BIVM-ERCC5R4GMW8 1640 aa9.69□□□□□ -0.86
LINC02249-202ENST00000562624 ERICH3Q5RHP9 1530 aa9.68□□□□□ -0.86
LINC02249-202ENST00000562624 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
LINC02249-202ENST00000562624 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.86
LINC02249-202ENST00000562624 ZNF644Q9H582 1327 aaPredicted RBP9.65□□□□□ -0.86
LINC02249-202ENST00000562624 CLSPNQ9HAW4 1339 aa9.65□□□□□ -0.87
LINC02249-202ENST00000562624 WDR97A6NE52 1622 aa9.64□□□□□ -0.87
LINC02249-202ENST00000562624 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
LINC02249-202ENST00000562624 ARHGAP35Q9NRY4 1499 aa9.64□□□□□ -0.87
LINC02249-202ENST00000562624 SLC4A1APQ9BWU0 796 aaKnown RBP9.63□□□□□ -0.87
LINC02249-202ENST00000562624 IQGAP2Q13576 1575 aa9.63□□□□□ -0.87
LINC02249-202ENST00000562624 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
LINC02249-202ENST00000562624 RAPGEF3O95398 923 aa9.63□□□□□ -0.87
LINC02249-202ENST00000562624 AFAP1Q8N556 730 aa9.63□□□□□ -0.87
LINC02249-202ENST00000562624 TARBP1Q13395 1621 aaKnown RBP9.61□□□□□ -0.87
LINC02249-202ENST00000562624 RGL3Q3MIN7 710 aa9.61□□□□□ -0.87
LINC02249-202ENST00000562624 UACAQ9BZF9 1416 aa9.61□□□□□ -0.87
LINC02249-202ENST00000562624 KIF3BO15066 747 aa9.61□□□□□ -0.87
LINC02249-202ENST00000562624 BCL11AQ9H165 835 aa9.6□□□□□ -0.87
LINC02249-202ENST00000562624 KDM2AQ9Y2K7 1162 aa9.6□□□□□ -0.87
LINC02249-202ENST00000562624 SPAG9O60271 1321 aaKnown RBP9.6□□□□□ -0.87
LINC02249-202ENST00000562624 AEBP2Q6ZN18 517 aaPredicted RBP9.59□□□□□ -0.87
LINC02249-202ENST00000562624 CUL7Q14999 1698 aa9.59□□□□□ -0.87
LINC02249-202ENST00000562624 ANP32EQ9BTT0 268 aa9.59□□□□□ -0.87
LINC02249-202ENST00000562624 ZNF316A6NFI3 1004 aaPredicted RBP9.58□□□□□ -0.88
LINC02249-202ENST00000562624 KIF21BO75037 1637 aa9.58□□□□□ -0.88
LINC02249-202ENST00000562624 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
LINC02249-202ENST00000562624 ADAMTS12P58397 1594 aa9.57□□□□□ -0.88
LINC02249-202ENST00000562624 FOXD1Q16676 465 aa9.56□□□□□ -0.88
LINC02249-202ENST00000562624 CDK13Q14004 1512 aaKnown RBP9.56□□□□□ -0.88
LINC02249-202ENST00000562624 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
LINC02249-202ENST00000562624 PPP1R15AO75807 674 aaPredicted RBP9.54□□□□□ -0.88
LINC02249-202ENST00000562624 ABCA5Q8WWZ7 1642 aa9.54□□□□□ -0.88
LINC02249-202ENST00000562624 PBRM1Q86U86 1689 aa9.54□□□□□ -0.88
LINC02249-202ENST00000562624 NUP160Q12769 1436 aa9.53□□□□□ -0.88
LINC02249-202ENST00000562624 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
LINC02249-202ENST00000562624 CASKIN1Q8WXD9 1431 aa9.52□□□□□ -0.89
LINC02249-202ENST00000562624 WASHC2CQ9Y4E1 1318 aa9.52□□□□□ -0.89
LINC02249-202ENST00000562624 CEP170Q5SW79 1584 aa9.51□□□□□ -0.89
LINC02249-202ENST00000562624 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
LINC02249-202ENST00000562624 CD109Q6YHK3 1445 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms