RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 SHROOM2Q13796 1616 aa35.9■■■■□ 3.34
NR4A1-219ENST00000562373 PRG4Q92954 1404 aaPredicted RBP35.85■■■■□ 3.33
NR4A1-219ENST00000562373 KIAA0586Q9BVV6 1533 aa35.77■■■■□ 3.32
NR4A1-219ENST00000562373 TRHP20396 242 aaPredicted RBP35.74■■■■□ 3.31
NR4A1-219ENST00000562373 RAPGEF2Q9Y4G8 1499 aa35.66■■■■□ 3.3
NR4A1-219ENST00000562373 TTBK1Q5TCY1 1321 aaPredicted RBP35.53■■■■□ 3.28
NR4A1-219ENST00000562373 IQGAP2Q13576 1575 aa35.5■■■■□ 3.27
NR4A1-219ENST00000562373 PRXQ9BXM0 1461 aa35.45■■■■□ 3.27
NR4A1-219ENST00000562373 CSRNP3Q8WYN3 585 aa35.44■■■■□ 3.26
NR4A1-219ENST00000562373 CHIC1Q5VXU3 224 aa35.43■■■■□ 3.26
NR4A1-219ENST00000562373 FAM9AQ8IZU1 332 aaPredicted RBP35.42■■■■□ 3.26
NR4A1-219ENST00000562373 CARMIL2Q6F5E8 1435 aa35.39■■■■□ 3.26
NR4A1-219ENST00000562373 PTPRGP23470 1445 aa35.37■■■■□ 3.25
NR4A1-219ENST00000562373 TNIKQ9UKE5 1360 aa35.34■■■■□ 3.25
NR4A1-219ENST00000562373 DISP1Q96F81 1524 aa35.33■■■■□ 3.25
NR4A1-219ENST00000562373 NPM1P06748 294 aaKnown RBP eCLIP35.3■■■■□ 3.24
NR4A1-219ENST00000562373 ADCY10Q96PN6 1610 aa35.3■■■■□ 3.24
NR4A1-219ENST00000562373 UGGT2Q9NYU1 1516 aa35.3■■■■□ 3.24
NR4A1-219ENST00000562373 CTTNBP2Q8WZ74 1663 aa35.27■■■■□ 3.24
NR4A1-219ENST00000562373 EEA1Q15075 1411 aa35.23■■■■□ 3.23
NR4A1-219ENST00000562373 KIAA0556O60303 1618 aa35.17■■■■□ 3.22
NR4A1-219ENST00000562373 UACAQ9BZF9 1416 aa35.09■■■■□ 3.21
NR4A1-219ENST00000562373 P3H3Q8IVL6 736 aa35.09■■■■□ 3.21
NR4A1-219ENST00000562373 EHMT2Q96KQ7 1210 aa35.09■■■■□ 3.21
NR4A1-219ENST00000562373 FAM69CQ0P6D2 419 aa35.07■■■■□ 3.2
NR4A1-219ENST00000562373 KIF13AQ9H1H9 1805 aa35.06■■■■□ 3.2
NR4A1-219ENST00000562373 GOLGA3Q08378 1498 aa35.05■■■■□ 3.2
NR4A1-219ENST00000562373 RANGAP1P46060 587 aaPredicted RBP35.05■■■■□ 3.2
NR4A1-219ENST00000562373 MAPKBP1O60336 1514 aa35.05■■■■□ 3.2
NR4A1-219ENST00000562373 ABCC2Q92887 1545 aa35.02■■■■□ 3.2
NR4A1-219ENST00000562373 UHRF1BP1LA0JNW5 1464 aa35.01■■■■□ 3.19
NR4A1-219ENST00000562373 ABCC10Q5T3U5 1492 aa35.01■■■■□ 3.19
NR4A1-219ENST00000562373 PLB1Q6P1J6 1458 aa34.96■■■■□ 3.19
NR4A1-219ENST00000562373 KIF21BO75037 1637 aa34.92■■■■□ 3.18
NR4A1-219ENST00000562373 DIP2BQ9P265 1576 aa34.92■■■■□ 3.18
NR4A1-219ENST00000562373 ASXL2Q76L83 1435 aa34.89■■■■□ 3.18
NR4A1-219ENST00000562373 KDM5BQ9UGL1 1544 aa34.87■■■■□ 3.17
NR4A1-219ENST00000562373 UBTFP17480 764 aaKnown RBP34.84■■■■□ 3.17
NR4A1-219ENST00000562373 ZCCHC11Q5TAX3 1644 aaKnown RBP34.83■■■■□ 3.17
NR4A1-219ENST00000562373 ABCA8O94911 1581 aa34.83■■■■□ 3.17
NR4A1-219ENST00000562373 SAMD9Q5K651 1589 aa34.81■■■■□ 3.16
NR4A1-219ENST00000562373 ARID3CA6NKF2 412 aa34.8■■■■□ 3.16
NR4A1-219ENST00000562373 TSPOAP1O95153 1857 aa34.76■■■■□ 3.16
NR4A1-219ENST00000562373 FHOD3Q2V2M9 1422 aa34.73■■■■□ 3.15
NR4A1-219ENST00000562373 EPRSP07814 1512 aaKnown RBP34.67■■■■□ 3.14
NR4A1-219ENST00000562373 KCNH8Q96L42 1107 aa34.65■■■■□ 3.14
NR4A1-219ENST00000562373 GLI2P10070 1586 aa34.63■■■■□ 3.13
NR4A1-219ENST00000562373 WDR7Q9Y4E6 1490 aa34.62■■■■□ 3.13
NR4A1-219ENST00000562373 ATP10BO94823 1461 aa34.61■■■■□ 3.13
NR4A1-219ENST00000562373 RAPGEF6Q8TEU7 1601 aa34.58■■■■□ 3.13
NR4A1-219ENST00000562373 EFCAB5A4FU69 1503 aa34.55■■■■□ 3.12
NR4A1-219ENST00000562373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.55■■■■□ 3.12
NR4A1-219ENST00000562373 HNRNPUL2Q1KMD3 747 aaKnown RBP34.55■■■■□ 3.12
NR4A1-219ENST00000562373 PPRC1Q5VV67 1664 aaKnown RBP34.52■■■■□ 3.12
NR4A1-219ENST00000562373 MAP3K4Q9Y6R4 1608 aa34.48■■■■□ 3.11
NR4A1-219ENST00000562373 NUP153P49790 1475 aaKnown RBP34.48■■■■□ 3.11
NR4A1-219ENST00000562373 ARHGAP35Q9NRY4 1499 aa34.47■■■■□ 3.11
NR4A1-219ENST00000562373 KDM6BO15054 1643 aa34.46■■■■□ 3.11
NR4A1-219ENST00000562373 ATP1B4Q9UN42 357 aaPredicted RBP34.4■■■■□ 3.1
NR4A1-219ENST00000562373 CD109Q6YHK3 1445 aa34.39■■■■□ 3.1
NR4A1-219ENST00000562373 COL17A1Q9UMD9 1497 aaPredicted RBP34.33■■■■□ 3.09
NR4A1-219ENST00000562373 TEX14Q8IWB6 1497 aa34.32■■■■□ 3.08
NR4A1-219ENST00000562373 CFAP43Q8NDM7 1665 aa34.31■■■■□ 3.08
NR4A1-219ENST00000562373 PLEKHD1A6NEE1 506 aa34.3■■■■□ 3.08
NR4A1-219ENST00000562373 FMN1Q68DA7 1419 aa34.29■■■■□ 3.08
NR4A1-219ENST00000562373 CDK13Q14004 1512 aaKnown RBP34.27■■■■□ 3.08
NR4A1-219ENST00000562373 MAGI3Q5TCQ9 1506 aa34.25■■■■□ 3.07
NR4A1-219ENST00000562373 ABCA9Q8IUA7 1624 aa34.19■■■■□ 3.06
NR4A1-219ENST00000562373 HECW1Q76N89 1606 aa34.15■■■■□ 3.06
NR4A1-219ENST00000562373 CLIP1P30622 1438 aa34.15■■■■□ 3.06
NR4A1-219ENST00000562373 AEBP2Q6ZN18 517 aaPredicted RBP34.14■■■■□ 3.06
NR4A1-219ENST00000562373 LOC105371045A0A1W2PR82 267 aa34.11■■■■□ 3.05
NR4A1-219ENST00000562373 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.05■■■■□ 3.04
NR4A1-219ENST00000562373 LRRIQ1Q96JM4 1722 aa34.05■■■■□ 3.04
NR4A1-219ENST00000562373 PCF11O94913 1555 aaKnown RBP34.03■■■■□ 3.04
NR4A1-219ENST00000562373 CASKIN1Q8WXD9 1431 aa34.02■■■■□ 3.04
NR4A1-219ENST00000562373 CDK11AQ9UQ88 783 aaPredicted RBP34.01■■■■□ 3.03
NR4A1-219ENST00000562373 TTC37Q6PGP7 1564 aa33.99■■■■□ 3.03
NR4A1-219ENST00000562373 KDM4FA0A1W2PPD8 638 aa33.97■■■■□ 3.03
NR4A1-219ENST00000562373 RAPGEF3O95398 923 aa33.97■■■■□ 3.03
NR4A1-219ENST00000562373 ARAP3Q8WWN8 1544 aa33.97■■■■□ 3.03
NR4A1-219ENST00000562373 NEO1Q92859 1461 aa33.94■■■■□ 3.02
NR4A1-219ENST00000562373 PHLDB1Q86UU1 1377 aa33.93■■■■□ 3.02
NR4A1-219ENST00000562373 CEP162Q5TB80 1403 aa33.93■■■■□ 3.02
NR4A1-219ENST00000562373 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
NR4A1-219ENST00000562373 KIF14Q15058 1648 aa33.9■■■■□ 3.02
NR4A1-219ENST00000562373 FANCAO15360 1455 aa33.88■■■■□ 3.01
NR4A1-219ENST00000562373 FYCO1Q9BQS8 1478 aa33.88■■■■□ 3.01
NR4A1-219ENST00000562373 AKNAQ7Z591 1439 aa33.87■■■■□ 3.01
NR4A1-219ENST00000562373 CCDC18Q5T9S5 1454 aa33.86■■■■□ 3.01
NR4A1-219ENST00000562373 PLCH2O75038 1416 aa33.85■■■■□ 3.01
NR4A1-219ENST00000562373 FRMPD1Q5SYB0 1578 aa33.77■■■■□ 3
NR4A1-219ENST00000562373 DENND4BO75064 1496 aaPredicted RBP33.76■■■■□ 3
NR4A1-219ENST00000562373 EFCAB2Q5VUJ9 269 aa33.76■■■□□ 2.99
NR4A1-219ENST00000562373 ADGRL1O94910 1474 aa33.76■■■□□ 2.99
NR4A1-219ENST00000562373 CFAP74Q9C0B2 1584 aa33.75■■■□□ 2.99
NR4A1-219ENST00000562373 MYO5CQ9NQX4 1742 aa33.74■■■□□ 2.99
NR4A1-219ENST00000562373 SCAPERQ9BY12 1400 aa33.7■■■□□ 2.99
NR4A1-219ENST00000562373 RICTORQ6R327 1708 aa33.68■■■□□ 2.98
NR4A1-219ENST00000562373 ARHGAP5Q13017 1502 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms