RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
CMTM3-204ENST00000562357 TRHP20396 242 aaPredicted RBP30.38■■■□□ 2.45
CMTM3-204ENST00000562357 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
CMTM3-204ENST00000562357 KIAA0586Q9BVV6 1533 aa30.33■■■□□ 2.45
CMTM3-204ENST00000562357 RAPGEF2Q9Y4G8 1499 aa30.19■■■□□ 2.42
CMTM3-204ENST00000562357 IQGAP2Q13576 1575 aa30.11■■■□□ 2.41
CMTM3-204ENST00000562357 CARMIL2Q6F5E8 1435 aa30.09■■■□□ 2.41
CMTM3-204ENST00000562357 NPM1P06748 294 aaKnown RBP eCLIP30.04■■■□□ 2.4
CMTM3-204ENST00000562357 PTPRGP23470 1445 aa29.99■■■□□ 2.39
CMTM3-204ENST00000562357 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
CMTM3-204ENST00000562357 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
CMTM3-204ENST00000562357 PRXQ9BXM0 1461 aa29.94■■■□□ 2.38
CMTM3-204ENST00000562357 UGGT2Q9NYU1 1516 aa29.91■■■□□ 2.38
CMTM3-204ENST00000562357 ADCY10Q96PN6 1610 aa29.9■■■□□ 2.38
CMTM3-204ENST00000562357 EEA1Q15075 1411 aa29.88■■■□□ 2.37
CMTM3-204ENST00000562357 CSRNP3Q8WYN3 585 aa29.88■■■□□ 2.37
CMTM3-204ENST00000562357 DISP1Q96F81 1524 aa29.87■■■□□ 2.37
CMTM3-204ENST00000562357 CTTNBP2Q8WZ74 1663 aa29.85■■■□□ 2.37
CMTM3-204ENST00000562357 MAPKBP1O60336 1514 aa29.83■■■□□ 2.37
CMTM3-204ENST00000562357 KIAA0556O60303 1618 aa29.8■■■□□ 2.36
CMTM3-204ENST00000562357 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
CMTM3-204ENST00000562357 UACAQ9BZF9 1416 aa29.77■■■□□ 2.36
CMTM3-204ENST00000562357 FAM69CQ0P6D2 419 aa29.75■■■□□ 2.35
CMTM3-204ENST00000562357 ABCC2Q92887 1545 aa29.75■■■□□ 2.35
CMTM3-204ENST00000562357 ABCC10Q5T3U5 1492 aa29.74■■■□□ 2.35
CMTM3-204ENST00000562357 UHRF1BP1LA0JNW5 1464 aa29.74■■■□□ 2.35
CMTM3-204ENST00000562357 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
CMTM3-204ENST00000562357 KIF13AQ9H1H9 1805 aa29.69■■■□□ 2.34
CMTM3-204ENST00000562357 CHIC1Q5VXU3 224 aa29.68■■■□□ 2.34
CMTM3-204ENST00000562357 DIP2BQ9P265 1576 aa29.66■■■□□ 2.34
CMTM3-204ENST00000562357 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
CMTM3-204ENST00000562357 ASXL2Q76L83 1435 aa29.59■■■□□ 2.33
CMTM3-204ENST00000562357 KDM5BQ9UGL1 1544 aa29.58■■■□□ 2.33
CMTM3-204ENST00000562357 KIF21BO75037 1637 aa29.53■■■□□ 2.32
CMTM3-204ENST00000562357 P3H3Q8IVL6 736 aa29.52■■■□□ 2.32
CMTM3-204ENST00000562357 ZCCHC11Q5TAX3 1644 aaKnown RBP29.5■■■□□ 2.31
CMTM3-204ENST00000562357 ABCA8O94911 1581 aa29.48■■■□□ 2.31
CMTM3-204ENST00000562357 RANGAP1P46060 587 aaPredicted RBP29.46■■■□□ 2.31
CMTM3-204ENST00000562357 SAMD9Q5K651 1589 aa29.45■■■□□ 2.31
CMTM3-204ENST00000562357 GLI2P10070 1586 aa29.44■■■□□ 2.3
CMTM3-204ENST00000562357 EPRSP07814 1512 aaKnown RBP29.4■■■□□ 2.3
CMTM3-204ENST00000562357 WDR7Q9Y4E6 1490 aa29.4■■■□□ 2.3
CMTM3-204ENST00000562357 TSPOAP1O95153 1857 aa29.4■■■□□ 2.3
CMTM3-204ENST00000562357 UBTFP17480 764 aaKnown RBP29.38■■■□□ 2.29
CMTM3-204ENST00000562357 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
CMTM3-204ENST00000562357 EFCAB5A4FU69 1503 aa29.34■■■□□ 2.29
CMTM3-204ENST00000562357 KDM6BO15054 1643 aa29.33■■■□□ 2.29
CMTM3-204ENST00000562357 FHOD3Q2V2M9 1422 aa29.31■■■□□ 2.28
CMTM3-204ENST00000562357 ARID3CA6NKF2 412 aa29.3■■■□□ 2.28
CMTM3-204ENST00000562357 RAPGEF6Q8TEU7 1601 aa29.28■■■□□ 2.28
CMTM3-204ENST00000562357 TEX14Q8IWB6 1497 aa29.28■■■□□ 2.28
CMTM3-204ENST00000562357 KCNH8Q96L42 1107 aa29.27■■■□□ 2.28
CMTM3-204ENST00000562357 MAP3K4Q9Y6R4 1608 aa29.26■■■□□ 2.27
CMTM3-204ENST00000562357 ATP10BO94823 1461 aa29.25■■■□□ 2.27
CMTM3-204ENST00000562357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.24■■■□□ 2.27
CMTM3-204ENST00000562357 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
CMTM3-204ENST00000562357 PPRC1Q5VV67 1664 aaKnown RBP29.21■■■□□ 2.27
CMTM3-204ENST00000562357 CD109Q6YHK3 1445 aa29.18■■■□□ 2.26
CMTM3-204ENST00000562357 AEBP2Q6ZN18 517 aaPredicted RBP29.17■■■□□ 2.26
CMTM3-204ENST00000562357 NUP153P49790 1475 aaKnown RBP29.16■■■□□ 2.26
CMTM3-204ENST00000562357 CFAP43Q8NDM7 1665 aa29.15■■■□□ 2.26
CMTM3-204ENST00000562357 MAGI3Q5TCQ9 1506 aa29.11■■■□□ 2.25
CMTM3-204ENST00000562357 FMN1Q68DA7 1419 aa29.09■■■□□ 2.25
CMTM3-204ENST00000562357 ARHGAP35Q9NRY4 1499 aa29.07■■■□□ 2.24
CMTM3-204ENST00000562357 PLEKHD1A6NEE1 506 aa29.06■■■□□ 2.24
CMTM3-204ENST00000562357 ATP1B4Q9UN42 357 aaPredicted RBP29.02■■■□□ 2.24
CMTM3-204ENST00000562357 ABCA9Q8IUA7 1624 aa29.01■■■□□ 2.23
CMTM3-204ENST00000562357 COL17A1Q9UMD9 1497 aaPredicted RBP29■■■□□ 2.23
CMTM3-204ENST00000562357 HECW1Q76N89 1606 aa28.97■■■□□ 2.23
CMTM3-204ENST00000562357 PHLDB1Q86UU1 1377 aa28.93■■■□□ 2.22
CMTM3-204ENST00000562357 CDK13Q14004 1512 aaKnown RBP28.92■■■□□ 2.22
CMTM3-204ENST00000562357 CDK11AQ9UQ88 783 aaPredicted RBP28.91■■■□□ 2.22
CMTM3-204ENST00000562357 NEO1Q92859 1461 aa28.86■■■□□ 2.21
CMTM3-204ENST00000562357 ARAP3Q8WWN8 1544 aa28.86■■■□□ 2.21
CMTM3-204ENST00000562357 CLIP1P30622 1438 aa28.84■■■□□ 2.21
CMTM3-204ENST00000562357 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.8■■■□□ 2.23e-7■■■■■ 59
CMTM3-204ENST00000562357 CASKIN1Q8WXD9 1431 aa28.77■■■□□ 2.2
CMTM3-204ENST00000562357 KDM4FA0A1W2PPD8 638 aa28.77■■■□□ 2.2
CMTM3-204ENST00000562357 TTC37Q6PGP7 1564 aa28.75■■■□□ 2.19
CMTM3-204ENST00000562357 FANCAO15360 1455 aa28.75■■■□□ 2.19
CMTM3-204ENST00000562357 CCDC18Q5T9S5 1454 aa28.75■■■□□ 2.19
CMTM3-204ENST00000562357 PCF11O94913 1555 aaKnown RBP28.75■■■□□ 2.19
CMTM3-204ENST00000562357 CFAP74Q9C0B2 1584 aa28.75■■■□□ 2.19
CMTM3-204ENST00000562357 TROQ12816 1431 aaPredicted RBP28.73■■■□□ 2.19
CMTM3-204ENST00000562357 ADGRL1O94910 1474 aa28.72■■■□□ 2.19
CMTM3-204ENST00000562357 RAPGEF3O95398 923 aa28.71■■■□□ 2.19
CMTM3-204ENST00000562357 FYCO1Q9BQS8 1478 aa28.71■■■□□ 2.19
CMTM3-204ENST00000562357 AKNAQ7Z591 1439 aa28.7■■■□□ 2.19
CMTM3-204ENST00000562357 KIF14Q15058 1648 aa28.7■■■□□ 2.19
CMTM3-204ENST00000562357 DENND4BO75064 1496 aaPredicted RBP28.67■■■□□ 2.18
CMTM3-204ENST00000562357 PLCH2O75038 1416 aa28.67■■■□□ 2.18
CMTM3-204ENST00000562357 LRRIQ1Q96JM4 1722 aa28.63■■■□□ 2.17
CMTM3-204ENST00000562357 EFCAB2Q5VUJ9 269 aa28.62■■■□□ 2.17
CMTM3-204ENST00000562357 CEP162Q5TB80 1403 aa28.6■■■□□ 2.17
CMTM3-204ENST00000562357 MYO5CQ9NQX4 1742 aa28.6■■■□□ 2.17
CMTM3-204ENST00000562357 FRMPD1Q5SYB0 1578 aa28.58■■■□□ 2.17
CMTM3-204ENST00000562357 ARHGAP5Q13017 1502 aa28.55■■■□□ 2.16
CMTM3-204ENST00000562357 SCAPERQ9BY12 1400 aa28.54■■■□□ 2.16
CMTM3-204ENST00000562357 RICTORQ6R327 1708 aa28.53■■■□□ 2.16
CMTM3-204ENST00000562357 POGZQ7Z3K3 1410 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms