RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 RIMBP3Q9UFD9 1639 aa37.05■■■■□ 3.52
SYNGR3-202ENST00000562045 ARHGEF11O15085 1522 aa37.05■■■■□ 3.52
SYNGR3-202ENST00000562045 SHROOM2Q13796 1616 aa36.99■■■■□ 3.51
SYNGR3-202ENST00000562045 KIAA0586Q9BVV6 1533 aa36.98■■■■□ 3.51
SYNGR3-202ENST00000562045 ERCC6L2Q5T890 1561 aa36.94■■■■□ 3.5
SYNGR3-202ENST00000562045 KIF21BO75037 1637 aa36.9■■■■□ 3.5
SYNGR3-202ENST00000562045 JPH4Q96JJ6 628 aa36.89■■■■□ 3.5
SYNGR3-202ENST00000562045 CTTNBP2Q8WZ74 1663 aa36.88■■■■□ 3.49
SYNGR3-202ENST00000562045 IQGAP2Q13576 1575 aa36.86■■■■□ 3.49
SYNGR3-202ENST00000562045 PRG4Q92954 1404 aaPredicted RBP36.82■■■■□ 3.48
SYNGR3-202ENST00000562045 EHMT2Q96KQ7 1210 aa36.82■■■■□ 3.48
SYNGR3-202ENST00000562045 ARAP1Q96P48 1450 aa36.8■■■■□ 3.48
SYNGR3-202ENST00000562045 CYB5RLQ6IPT4 315 aa36.68■■■■□ 3.46
SYNGR3-202ENST00000562045 GOLGA3Q08378 1498 aa36.67■■■■□ 3.46
SYNGR3-202ENST00000562045 UGGT2Q9NYU1 1516 aa36.66■■■■□ 3.46
SYNGR3-202ENST00000562045 DISP1Q96F81 1524 aa36.63■■■■□ 3.45
SYNGR3-202ENST00000562045 UBTFP17480 764 aaKnown RBP36.55■■■■□ 3.44
SYNGR3-202ENST00000562045 KIAA0556O60303 1618 aa36.54■■■■□ 3.44
SYNGR3-202ENST00000562045 CARMIL2Q6F5E8 1435 aa36.51■■■■□ 3.44
SYNGR3-202ENST00000562045 RANGAP1P46060 587 aaPredicted RBP36.48■■■■□ 3.43
SYNGR3-202ENST00000562045 TTBK1Q5TCY1 1321 aaPredicted RBP36.44■■■■□ 3.42
SYNGR3-202ENST00000562045 TNIKQ9UKE5 1360 aa36.42■■■■□ 3.42
SYNGR3-202ENST00000562045 SAMD9Q5K651 1589 aa36.42■■■■□ 3.42
SYNGR3-202ENST00000562045 PTPRGP23470 1445 aa36.38■■■■□ 3.41
SYNGR3-202ENST00000562045 P3H3Q8IVL6 736 aa36.37■■■■□ 3.41
SYNGR3-202ENST00000562045 LOC105371045A0A1W2PR82 267 aa36.37■■■■□ 3.41
SYNGR3-202ENST00000562045 ADCY10Q96PN6 1610 aa36.27■■■■□ 3.4
SYNGR3-202ENST00000562045 FHOD3Q2V2M9 1422 aa36.23■■■■□ 3.39
SYNGR3-202ENST00000562045 EFCAB5A4FU69 1503 aa36.22■■■■□ 3.39
SYNGR3-202ENST00000562045 ARHGAP35Q9NRY4 1499 aa36.2■■■■□ 3.39
SYNGR3-202ENST00000562045 PLB1Q6P1J6 1458 aa36.17■■■■□ 3.38
SYNGR3-202ENST00000562045 UACAQ9BZF9 1416 aa36.15■■■■□ 3.38
SYNGR3-202ENST00000562045 ABCA8O94911 1581 aa36.11■■■■□ 3.37
SYNGR3-202ENST00000562045 ABCC2Q92887 1545 aa36.1■■■■□ 3.37
SYNGR3-202ENST00000562045 UHRF1BP1LA0JNW5 1464 aa36.09■■■■□ 3.37
SYNGR3-202ENST00000562045 CLIP1P30622 1438 aa36.04■■■■□ 3.36
SYNGR3-202ENST00000562045 CEP162Q5TB80 1403 aa35.99■■■■□ 3.35
SYNGR3-202ENST00000562045 RAPGEF6Q8TEU7 1601 aa35.98■■■■□ 3.35
SYNGR3-202ENST00000562045 KDM5BQ9UGL1 1544 aa35.95■■■■□ 3.35
SYNGR3-202ENST00000562045 ZCCHC11Q5TAX3 1644 aaKnown RBP35.94■■■■□ 3.34
SYNGR3-202ENST00000562045 NPM1P06748 294 aaKnown RBP eCLIP35.94■■■■□ 3.34
SYNGR3-202ENST00000562045 ARID3CA6NKF2 412 aa35.9■■■■□ 3.34
SYNGR3-202ENST00000562045 MAPKBP1O60336 1514 aa35.89■■■■□ 3.34
SYNGR3-202ENST00000562045 NUP153P49790 1475 aaKnown RBP35.87■■■■□ 3.33
SYNGR3-202ENST00000562045 FMN1Q68DA7 1419 aa35.86■■■■□ 3.33
SYNGR3-202ENST00000562045 ATP10BO94823 1461 aa35.81■■■■□ 3.32
SYNGR3-202ENST00000562045 ASXL2Q76L83 1435 aa35.79■■■■□ 3.32
SYNGR3-202ENST00000562045 TRHP20396 242 aaPredicted RBP35.78■■■■□ 3.32
SYNGR3-202ENST00000562045 PCF11O94913 1555 aaKnown RBP35.76■■■■□ 3.32
SYNGR3-202ENST00000562045 KIF13AQ9H1H9 1805 aa35.74■■■■□ 3.31
SYNGR3-202ENST00000562045 LRRIQ1Q96JM4 1722 aa35.74■■■■□ 3.31
SYNGR3-202ENST00000562045 HECW1Q76N89 1606 aa35.72■■■■□ 3.31
SYNGR3-202ENST00000562045 ATP1B4Q9UN42 357 aaPredicted RBP35.71■■■■□ 3.31
SYNGR3-202ENST00000562045 CDK13Q14004 1512 aaKnown RBP35.7■■■■□ 3.31
SYNGR3-202ENST00000562045 DIP2BQ9P265 1576 aa35.69■■■■□ 3.3
SYNGR3-202ENST00000562045 ABCC10Q5T3U5 1492 aa35.68■■■■□ 3.3
SYNGR3-202ENST00000562045 CASKIN1Q8WXD9 1431 aa35.67■■■■□ 3.3
SYNGR3-202ENST00000562045 EPRSP07814 1512 aaKnown RBP35.64■■■■□ 3.3
SYNGR3-202ENST00000562045 WDR7Q9Y4E6 1490 aa35.64■■■■□ 3.3
SYNGR3-202ENST00000562045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.63■■■■□ 3.29
SYNGR3-202ENST00000562045 HNRNPUL2Q1KMD3 747 aaKnown RBP35.63■■■■□ 3.29
SYNGR3-202ENST00000562045 FYCO1Q9BQS8 1478 aa35.6■■■■□ 3.29
SYNGR3-202ENST00000562045 FAM69CQ0P6D2 419 aa35.6■■■■□ 3.29
SYNGR3-202ENST00000562045 KCNH8Q96L42 1107 aa35.52■■■■□ 3.28
SYNGR3-202ENST00000562045 VPS8Q8N3P4 1428 aa35.5■■■■□ 3.27
SYNGR3-202ENST00000562045 GLI2P10070 1586 aa35.49■■■■□ 3.27
SYNGR3-202ENST00000562045 TSPOAP1O95153 1857 aa35.45■■■■□ 3.27
SYNGR3-202ENST00000562045 CCDC18Q5T9S5 1454 aa35.45■■■■□ 3.26
SYNGR3-202ENST00000562045 PLEKHD1A6NEE1 506 aa35.44■■■■□ 3.26
SYNGR3-202ENST00000562045 MAP3K4Q9Y6R4 1608 aa35.42■■■■□ 3.26
SYNGR3-202ENST00000562045 MAGI3Q5TCQ9 1506 aa35.41■■■■□ 3.26
SYNGR3-202ENST00000562045 PPRC1Q5VV67 1664 aaKnown RBP35.37■■■■□ 3.25
SYNGR3-202ENST00000562045 ABCA9Q8IUA7 1624 aa35.34■■■■□ 3.25
SYNGR3-202ENST00000562045 CFAP43Q8NDM7 1665 aa35.33■■■■□ 3.25
SYNGR3-202ENST00000562045 KIF14Q15058 1648 aa35.32■■■■□ 3.24
SYNGR3-202ENST00000562045 TROQ12816 1431 aaPredicted RBP35.31■■■■□ 3.24
SYNGR3-202ENST00000562045 CDK11AQ9UQ88 783 aaPredicted RBP35.31■■■■□ 3.24
SYNGR3-202ENST00000562045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.3■■■■□ 3.24
SYNGR3-202ENST00000562045 TTC37Q6PGP7 1564 aa35.28■■■■□ 3.24
SYNGR3-202ENST00000562045 CD109Q6YHK3 1445 aa35.26■■■■□ 3.24
SYNGR3-202ENST00000562045 TIAM1Q13009 1591 aa35.24■■■■□ 3.23
SYNGR3-202ENST00000562045 MTUS2Q5JR59 1369 aa35.14■■■■□ 3.22
SYNGR3-202ENST00000562045 MAP3K1Q13233 1512 aa35.11■■■■□ 3.21
SYNGR3-202ENST00000562045 EHBP1L1Q8N3D4 1523 aa35.11■■■■□ 3.21
SYNGR3-202ENST00000562045 KANK4Q5T7N3 995 aaPredicted RBP35.09■■■■□ 3.21
SYNGR3-202ENST00000562045 TEX14Q8IWB6 1497 aa35.09■■■■□ 3.21
SYNGR3-202ENST00000562045 MYO5CQ9NQX4 1742 aa35.08■■■■□ 3.21
SYNGR3-202ENST00000562045 LRRC9Q6ZRR7 1453 aa35.07■■■■□ 3.2
SYNGR3-202ENST00000562045 PLCH2O75038 1416 aa35.02■■■■□ 3.2
SYNGR3-202ENST00000562045 CDC42BPAQ5VT25 1732 aa35.02■■■■□ 3.2
SYNGR3-202ENST00000562045 COL17A1Q9UMD9 1497 aaPredicted RBP35.02■■■■□ 3.2
SYNGR3-202ENST00000562045 CDC42BPBQ9Y5S2 1711 aa35.01■■■■□ 3.2
SYNGR3-202ENST00000562045 KDM6BO15054 1643 aa35■■■■□ 3.19
SYNGR3-202ENST00000562045 FANCAO15360 1455 aa34.97■■■■□ 3.19
SYNGR3-202ENST00000562045 PREX2Q70Z35 1606 aa34.97■■■■□ 3.19
SYNGR3-202ENST00000562045 SUPT6HQ7KZ85 1726 aaKnown RBP34.97■■■■□ 3.19
SYNGR3-202ENST00000562045 APLP2Q06481 763 aa34.96■■■■□ 3.19
SYNGR3-202ENST00000562045 NCOA2Q15596 1464 aa34.94■■■■□ 3.18
SYNGR3-202ENST00000562045 NEO1Q92859 1461 aa34.94■■■■□ 3.18
SYNGR3-202ENST00000562045 GPATCH8Q9UKJ3 1502 aaKnown RBP34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms