RNA–Protein interactions for RNA: ENST00000561775.5

RPL4-203, Transcript of ribosomal protein L4, humanhuman

TSL 5

Gene RPL4, Length 1,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-203ENST00000561775 TOPBP1Q92547 1522 aa13.02□□□□□ -0.32
RPL4-203ENST00000561775 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.32
RPL4-203ENST00000561775 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
RPL4-203ENST00000561775 WDR62O43379 1518 aa13□□□□□ -0.33
RPL4-203ENST00000561775 SPDYE2BA6NHP3 402 aa12.99□□□□□ -0.33
RPL4-203ENST00000561775 SPDYE6P0CI01 402 aa12.99□□□□□ -0.33
RPL4-203ENST00000561775 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
RPL4-203ENST00000561775 TOP2BQ02880 1626 aa12.99□□□□□ -0.33
RPL4-203ENST00000561775 SYNJ1O43426 1573 aa12.99□□□□□ -0.33
RPL4-203ENST00000561775 AKT1S1Q96B36 256 aa12.97□□□□□ -0.33
RPL4-203ENST00000561775 BIVM-ERCC5R4GMW8 1640 aa12.97□□□□□ -0.33
RPL4-203ENST00000561775 FGD5Q6ZNL6 1462 aa12.94□□□□□ -0.34
RPL4-203ENST00000561775 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
RPL4-203ENST00000561775 SOGA1O94964 1423 aa12.92□□□□□ -0.34
RPL4-203ENST00000561775 CUX2O14529 1486 aa12.9□□□□□ -0.34
RPL4-203ENST00000561775 ZNF692Q9BU19 519 aaPredicted RBP12.9□□□□□ -0.34
RPL4-203ENST00000561775 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
RPL4-203ENST00000561775 IFT140Q96RY7 1462 aa12.89□□□□□ -0.35
RPL4-203ENST00000561775 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
RPL4-203ENST00000561775 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
RPL4-203ENST00000561775 ABCA10Q8WWZ4 1543 aa12.84□□□□□ -0.35
RPL4-203ENST00000561775 TARBP1Q13395 1621 aaKnown RBP12.82□□□□□ -0.36
RPL4-203ENST00000561775 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
RPL4-203ENST00000561775 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
RPL4-203ENST00000561775 EEA1Q15075 1411 aa12.78□□□□□ -0.36
RPL4-203ENST00000561775 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
RPL4-203ENST00000561775 ZNF608Q9ULD9 1512 aaPredicted RBP12.77□□□□□ -0.37
RPL4-203ENST00000561775 WDR97A6NE52 1622 aa12.76□□□□□ -0.37
RPL4-203ENST00000561775 AQRO60306 1485 aaKnown RBP eCLIP12.76□□□□□ -0.371e-11■■■■■ 78.3
RPL4-203ENST00000561775 GAPVD1Q14C86 1478 aa12.76□□□□□ -0.37
RPL4-203ENST00000561775 FAM9AQ8IZU1 332 aaPredicted RBP12.76□□□□□ -0.37
RPL4-203ENST00000561775 RUSC2Q8N2Y8 1516 aa12.74□□□□□ -0.37
RPL4-203ENST00000561775 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
RPL4-203ENST00000561775 ABCA5Q8WWZ7 1642 aa12.72□□□□□ -0.37
RPL4-203ENST00000561775 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
RPL4-203ENST00000561775 GRIN2BQ13224 1484 aa12.72□□□□□ -0.37
RPL4-203ENST00000561775 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
RPL4-203ENST00000561775 IGF1RP08069 1367 aa12.71□□□□□ -0.38
RPL4-203ENST00000561775 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
RPL4-203ENST00000561775 SPDYE1Q8NFV5 336 aaPredicted RBP12.66□□□□□ -0.38
RPL4-203ENST00000561775 CARMIL1Q5VZK9 1371 aa12.66□□□□□ -0.38
RPL4-203ENST00000561775 PBRM1Q86U86 1689 aa12.66□□□□□ -0.38
RPL4-203ENST00000561775 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
RPL4-203ENST00000561775 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
RPL4-203ENST00000561775 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
RPL4-203ENST00000561775 CUL7Q14999 1698 aa12.62□□□□□ -0.39
RPL4-203ENST00000561775 CHMP7Q8WUX9 453 aaPredicted RBP12.62□□□□□ -0.39
RPL4-203ENST00000561775 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
RPL4-203ENST00000561775 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
RPL4-203ENST00000561775 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
RPL4-203ENST00000561775 POTEHQ6S545 545 aa12.59□□□□□ -0.39
RPL4-203ENST00000561775 SYNJ2O15056 1496 aa12.59□□□□□ -0.39
RPL4-203ENST00000561775 ADAMTS12P58397 1594 aa12.59□□□□□ -0.39
RPL4-203ENST00000561775 FKBP8Q14318 412 aa12.57□□□□□ -0.4
RPL4-203ENST00000561775 PROM2Q8N271 834 aa12.57□□□□□ -0.4
RPL4-203ENST00000561775 KIF21BO75037 1637 aa12.56□□□□□ -0.4
RPL4-203ENST00000561775 UBTFP17480 764 aaKnown RBP12.56□□□□□ -0.4
RPL4-203ENST00000561775 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
RPL4-203ENST00000561775 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
RPL4-203ENST00000561775 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
RPL4-203ENST00000561775 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
RPL4-203ENST00000561775 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
RPL4-203ENST00000561775 CHD1O14646 1710 aa12.47□□□□□ -0.41
RPL4-203ENST00000561775 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
RPL4-203ENST00000561775 NUP160Q12769 1436 aa12.46□□□□□ -0.41
RPL4-203ENST00000561775 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
RPL4-203ENST00000561775 STAG3Q9UJ98 1225 aa12.45□□□□□ -0.42
RPL4-203ENST00000561775 KIAA0586Q9BVV6 1533 aa12.44□□□□□ -0.42
RPL4-203ENST00000561775 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
RPL4-203ENST00000561775 RANGAP1P46060 587 aaPredicted RBP12.41□□□□□ -0.42
RPL4-203ENST00000561775 CTTNBP2Q8WZ74 1663 aa12.4□□□□□ -0.42
RPL4-203ENST00000561775 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
RPL4-203ENST00000561775 IQGAP2Q13576 1575 aa12.39□□□□□ -0.43
RPL4-203ENST00000561775 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
RPL4-203ENST00000561775 CLASP1Q7Z460 1538 aa12.37□□□□□ -0.43
RPL4-203ENST00000561775 CEP162Q5TB80 1403 aa12.35□□□□□ -0.43
RPL4-203ENST00000561775 CLIP1P30622 1438 aa12.35□□□□□ -0.43
RPL4-203ENST00000561775 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
RPL4-203ENST00000561775 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
RPL4-203ENST00000561775 CARMIL2Q6F5E8 1435 aa12.34□□□□□ -0.43
RPL4-203ENST00000561775 PRG4Q92954 1404 aaPredicted RBP12.32□□□□□ -0.44
RPL4-203ENST00000561775 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
RPL4-203ENST00000561775 EFCAB5A4FU69 1503 aa12.31□□□□□ -0.44
RPL4-203ENST00000561775 SHROOM2Q13796 1616 aa12.3□□□□□ -0.44
RPL4-203ENST00000561775 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
RPL4-203ENST00000561775 CREBZFQ9NS37 354 aa12.29□□□□□ -0.44
RPL4-203ENST00000561775 DISP1Q96F81 1524 aa12.28□□□□□ -0.44
RPL4-203ENST00000561775 SAMD9Q5K651 1589 aa12.27□□□□□ -0.44
RPL4-203ENST00000561775 TTBK1Q5TCY1 1321 aaPredicted RBP12.26□□□□□ -0.45
RPL4-203ENST00000561775 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
RPL4-203ENST00000561775 FHOD3Q2V2M9 1422 aa12.25□□□□□ -0.45
RPL4-203ENST00000561775 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
RPL4-203ENST00000561775 PTPRGP23470 1445 aa12.23□□□□□ -0.45
RPL4-203ENST00000561775 FMN1Q68DA7 1419 aa12.22□□□□□ -0.45
RPL4-203ENST00000561775 ERCC6L2Q5T890 1561 aa12.21□□□□□ -0.45
RPL4-203ENST00000561775 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
RPL4-203ENST00000561775 ARHGEF11O15085 1522 aa12.2□□□□□ -0.46
RPL4-203ENST00000561775 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
RPL4-203ENST00000561775 VPS8Q8N3P4 1428 aa12.18□□□□□ -0.46
RPL4-203ENST00000561775 DNAJC5Q9H3Z4 198 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1049 ms