RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 IGF1RP08069 1367 aa34.08■■■■□ 3.05
RMDN3-208ENST00000560460 CUL7Q14999 1698 aa34.06■■■■□ 3.04
RMDN3-208ENST00000560460 KIAA0586Q9BVV6 1533 aa33.98■■■■□ 3.03
RMDN3-208ENST00000560460 KIF13AQ9H1H9 1805 aa33.93■■■■□ 3.02
RMDN3-208ENST00000560460 CARMIL1Q5VZK9 1371 aa33.88■■■■□ 3.01
RMDN3-208ENST00000560460 NPM1P06748 294 aaKnown RBP eCLIP33.88■■■■□ 3.01
RMDN3-208ENST00000560460 ADCY10Q96PN6 1610 aa33.85■■■■□ 3.01
RMDN3-208ENST00000560460 AEBP2Q6ZN18 517 aaPredicted RBP33.8■■■■□ 3
RMDN3-208ENST00000560460 MAPKBP1O60336 1514 aa33.78■■■■□ 3
RMDN3-208ENST00000560460 FAM69CQ0P6D2 419 aa33.77■■■■□ 3
RMDN3-208ENST00000560460 ABCC10Q5T3U5 1492 aa33.76■■■■□ 3
RMDN3-208ENST00000560460 TTBK1Q5TCY1 1321 aaPredicted RBP33.72■■■□□ 2.99
RMDN3-208ENST00000560460 DIP2BQ9P265 1576 aa33.7■■■□□ 2.99
RMDN3-208ENST00000560460 PTPRGP23470 1445 aa33.7■■■□□ 2.98
RMDN3-208ENST00000560460 IQGAP2Q13576 1575 aa33.69■■■□□ 2.98
RMDN3-208ENST00000560460 CARMIL2Q6F5E8 1435 aa33.68■■■□□ 2.98
RMDN3-208ENST00000560460 TNIKQ9UKE5 1360 aa33.63■■■□□ 2.97
RMDN3-208ENST00000560460 RAPGEF2Q9Y4G8 1499 aa33.57■■■□□ 2.97
RMDN3-208ENST00000560460 TSPOAP1O95153 1857 aa33.52■■■□□ 2.96
RMDN3-208ENST00000560460 ABCC2Q92887 1545 aa33.51■■■□□ 2.95
RMDN3-208ENST00000560460 DISP1Q96F81 1524 aa33.51■■■□□ 2.95
RMDN3-208ENST00000560460 UGGT2Q9NYU1 1516 aa33.44■■■□□ 2.94
RMDN3-208ENST00000560460 KDM6BO15054 1643 aa33.43■■■□□ 2.94
RMDN3-208ENST00000560460 UACAQ9BZF9 1416 aa33.43■■■□□ 2.94
RMDN3-208ENST00000560460 UHRF1BP1LA0JNW5 1464 aa33.43■■■□□ 2.94
RMDN3-208ENST00000560460 ASXL2Q76L83 1435 aa33.41■■■□□ 2.94
RMDN3-208ENST00000560460 KIAA0556O60303 1618 aa33.39■■■□□ 2.93
RMDN3-208ENST00000560460 PLB1Q6P1J6 1458 aa33.38■■■□□ 2.93
RMDN3-208ENST00000560460 CTTNBP2Q8WZ74 1663 aa33.34■■■□□ 2.93
RMDN3-208ENST00000560460 GLI2P10070 1586 aa33.29■■■□□ 2.92
RMDN3-208ENST00000560460 KDM5BQ9UGL1 1544 aa33.28■■■□□ 2.92
RMDN3-208ENST00000560460 ZCCHC11Q5TAX3 1644 aaKnown RBP33.26■■■□□ 2.91
RMDN3-208ENST00000560460 PPRC1Q5VV67 1664 aaKnown RBP33.23■■■□□ 2.91
RMDN3-208ENST00000560460 PRXQ9BXM0 1461 aa33.2■■■□□ 2.91
RMDN3-208ENST00000560460 EPRSP07814 1512 aaKnown RBP33.2■■■□□ 2.91
RMDN3-208ENST00000560460 GOLGA3Q08378 1498 aa33.19■■■□□ 2.9
RMDN3-208ENST00000560460 MAP3K4Q9Y6R4 1608 aa33.13■■■□□ 2.89
RMDN3-208ENST00000560460 WDR7Q9Y4E6 1490 aa33.08■■■□□ 2.89
RMDN3-208ENST00000560460 ABCA8O94911 1581 aa33.06■■■□□ 2.88
RMDN3-208ENST00000560460 KDM4FA0A1W2PPD8 638 aa33.06■■■□□ 2.88
RMDN3-208ENST00000560460 TEX14Q8IWB6 1497 aa33.05■■■□□ 2.88
RMDN3-208ENST00000560460 COL17A1Q9UMD9 1497 aaPredicted RBP32.99■■■□□ 2.87
RMDN3-208ENST00000560460 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.87
RMDN3-208ENST00000560460 P3H3Q8IVL6 736 aa32.94■■■□□ 2.86
RMDN3-208ENST00000560460 KCNH8Q96L42 1107 aa32.94■■■□□ 2.86
RMDN3-208ENST00000560460 FAM9AQ8IZU1 332 aaPredicted RBP32.92■■■□□ 2.86
RMDN3-208ENST00000560460 CFAP43Q8NDM7 1665 aa32.89■■■□□ 2.86
RMDN3-208ENST00000560460 CD109Q6YHK3 1445 aa32.89■■■□□ 2.86
RMDN3-208ENST00000560460 ARID3CA6NKF2 412 aa32.88■■■□□ 2.85
RMDN3-208ENST00000560460 MAGI3Q5TCQ9 1506 aa32.83■■■□□ 2.85
RMDN3-208ENST00000560460 ADGRL1O94910 1474 aa32.83■■■□□ 2.85
RMDN3-208ENST00000560460 SAMD9Q5K651 1589 aa32.83■■■□□ 2.85
RMDN3-208ENST00000560460 EEA1Q15075 1411 aa32.8■■■□□ 2.84
RMDN3-208ENST00000560460 ATP10BO94823 1461 aa32.78■■■□□ 2.84
RMDN3-208ENST00000560460 RANGAP1P46060 587 aaPredicted RBP32.74■■■□□ 2.83
RMDN3-208ENST00000560460 RAPGEF6Q8TEU7 1601 aa32.73■■■□□ 2.83
RMDN3-208ENST00000560460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.66■■■□□ 2.82
RMDN3-208ENST00000560460 HNRNPUL2Q1KMD3 747 aaKnown RBP32.66■■■□□ 2.82
RMDN3-208ENST00000560460 FHOD3Q2V2M9 1422 aa32.63■■■□□ 2.81
RMDN3-208ENST00000560460 ABCA9Q8IUA7 1624 aa32.62■■■□□ 2.81
RMDN3-208ENST00000560460 NUP153P49790 1475 aaKnown RBP32.59■■■□□ 2.81
RMDN3-208ENST00000560460 ARAP3Q8WWN8 1544 aa32.57■■■□□ 2.8
RMDN3-208ENST00000560460 KIF21BO75037 1637 aa32.57■■■□□ 2.8
RMDN3-208ENST00000560460 EFCAB5A4FU69 1503 aa32.51■■■□□ 2.79
RMDN3-208ENST00000560460 PHLDB1Q86UU1 1377 aa32.49■■■□□ 2.79
RMDN3-208ENST00000560460 NEO1Q92859 1461 aa32.45■■■□□ 2.79
RMDN3-208ENST00000560460 EHMT2Q96KQ7 1210 aa32.44■■■□□ 2.78
RMDN3-208ENST00000560460 PLEKHD1A6NEE1 506 aa32.42■■■□□ 2.78
RMDN3-208ENST00000560460 RAPGEF3O95398 923 aa32.42■■■□□ 2.78
RMDN3-208ENST00000560460 HECW2Q9P2P5 1572 aa32.39■■■□□ 2.78
RMDN3-208ENST00000560460 UBTFP17480 764 aaKnown RBP32.37■■■□□ 2.77
RMDN3-208ENST00000560460 FRMPD1Q5SYB0 1578 aa32.33■■■□□ 2.77
RMDN3-208ENST00000560460 CHIC1Q5VXU3 224 aa32.32■■■□□ 2.76
RMDN3-208ENST00000560460 CDK13Q14004 1512 aaKnown RBP32.31■■■□□ 2.76
RMDN3-208ENST00000560460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.3■■■□□ 2.76
RMDN3-208ENST00000560460 TTC37Q6PGP7 1564 aa32.28■■■□□ 2.76
RMDN3-208ENST00000560460 CFAP74Q9C0B2 1584 aa32.27■■■□□ 2.76
RMDN3-208ENST00000560460 FANCAO15360 1455 aa32.26■■■□□ 2.75
RMDN3-208ENST00000560460 ATP1B4Q9UN42 357 aaPredicted RBP32.25■■■□□ 2.75
RMDN3-208ENST00000560460 AKNAQ7Z591 1439 aa32.25■■■□□ 2.75
RMDN3-208ENST00000560460 DENND4BO75064 1496 aaPredicted RBP32.24■■■□□ 2.75
RMDN3-208ENST00000560460 RICTORQ6R327 1708 aa32.22■■■□□ 2.75
RMDN3-208ENST00000560460 ARID4BQ4LE39 1312 aaPredicted RBP32.22■■■□□ 2.75
RMDN3-208ENST00000560460 ADAMTSL3P82987 1691 aa32.21■■■□□ 2.75
RMDN3-208ENST00000560460 FMN1Q68DA7 1419 aa32.21■■■□□ 2.75
RMDN3-208ENST00000560460 ARHGAP35Q9NRY4 1499 aa32.21■■■□□ 2.75
RMDN3-208ENST00000560460 HECW1Q76N89 1606 aa32.19■■■□□ 2.74
RMDN3-208ENST00000560460 ARHGEF40Q8TER5 1519 aa32.18■■■□□ 2.74
RMDN3-208ENST00000560460 BCORL1Q5H9F3 1711 aa32.17■■■□□ 2.74
RMDN3-208ENST00000560460 PTPRMP28827 1452 aa32.16■■■□□ 2.74
RMDN3-208ENST00000560460 MADDQ8WXG6 1647 aa32.11■■■□□ 2.73
RMDN3-208ENST00000560460 ILDR1Q86SU0 546 aaPredicted RBP32.09■■■□□ 2.73
RMDN3-208ENST00000560460 ZMYM4Q5VZL5 1548 aa32.08■■■□□ 2.73
RMDN3-208ENST00000560460 PLCH2O75038 1416 aa32.08■■■□□ 2.73
RMDN3-208ENST00000560460 CDK11AQ9UQ88 783 aaPredicted RBP32.07■■■□□ 2.72
RMDN3-208ENST00000560460 ZFYVE16Q7Z3T8 1539 aa32.05■■■□□ 2.72
RMDN3-208ENST00000560460 MYO5CQ9NQX4 1742 aa32.05■■■□□ 2.72
RMDN3-208ENST00000560460 SCAPERQ9BY12 1400 aa32.03■■■□□ 2.72
RMDN3-208ENST00000560460 YEATS2Q9ULM3 1422 aa32.02■■■□□ 2.72
RMDN3-208ENST00000560460 KIF14Q15058 1648 aa32.01■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms