RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 PRG4Q92954 1404 aaPredicted RBP15.63■□□□□ 0.09
IDH3A-217ENST00000559889 CUL7Q14999 1698 aa15.62■□□□□ 0.09
IDH3A-217ENST00000559889 CARMIL1Q5VZK9 1371 aa15.59■□□□□ 0.09
IDH3A-217ENST00000559889 KIAA0586Q9BVV6 1533 aa15.59■□□□□ 0.09
IDH3A-217ENST00000559889 RAPGEF2Q9Y4G8 1499 aa15.46■□□□□ 0.07
IDH3A-217ENST00000559889 IQGAP2Q13576 1575 aa15.44■□□□□ 0.06
IDH3A-217ENST00000559889 ADCY10Q96PN6 1610 aa15.43■□□□□ 0.06
IDH3A-217ENST00000559889 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
IDH3A-217ENST00000559889 PTPRGP23470 1445 aa15.4■□□□□ 0.06
IDH3A-217ENST00000559889 CARMIL2Q6F5E8 1435 aa15.4■□□□□ 0.06
IDH3A-217ENST00000559889 DISP1Q96F81 1524 aa15.39■□□□□ 0.05
IDH3A-217ENST00000559889 TNIKQ9UKE5 1360 aa15.39■□□□□ 0.05
IDH3A-217ENST00000559889 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
IDH3A-217ENST00000559889 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
IDH3A-217ENST00000559889 PRXQ9BXM0 1461 aa15.37■□□□□ 0.05
IDH3A-217ENST00000559889 UGGT2Q9NYU1 1516 aa15.37■□□□□ 0.05
IDH3A-217ENST00000559889 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
IDH3A-217ENST00000559889 ABCC10Q5T3U5 1492 aa15.35■□□□□ 0.05
IDH3A-217ENST00000559889 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
IDH3A-217ENST00000559889 FAM69CQ0P6D2 419 aa15.32■□□□□ 0.04
IDH3A-217ENST00000559889 DIP2BQ9P265 1576 aa15.31■□□□□ 0.04
IDH3A-217ENST00000559889 ABCC2Q92887 1545 aa15.31■□□□□ 0.04
IDH3A-217ENST00000559889 KIAA0556O60303 1618 aa15.31■□□□□ 0.04
IDH3A-217ENST00000559889 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
IDH3A-217ENST00000559889 UACAQ9BZF9 1416 aa15.29■□□□□ 0.04
IDH3A-217ENST00000559889 CTTNBP2Q8WZ74 1663 aa15.29■□□□□ 0.04
IDH3A-217ENST00000559889 CSRNP3Q8WYN3 585 aa15.27■□□□□ 0.04
IDH3A-217ENST00000559889 ASXL2Q76L83 1435 aa15.24■□□□□ 0.03
IDH3A-217ENST00000559889 KDM5BQ9UGL1 1544 aa15.24■□□□□ 0.03
IDH3A-217ENST00000559889 GOLGA3Q08378 1498 aa15.23■□□□□ 0.03
IDH3A-217ENST00000559889 EEA1Q15075 1411 aa15.22■□□□□ 0.03
IDH3A-217ENST00000559889 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.03
IDH3A-217ENST00000559889 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
IDH3A-217ENST00000559889 GLI2P10070 1586 aa15.17■□□□□ 0.02
IDH3A-217ENST00000559889 ABCA8O94911 1581 aa15.17■□□□□ 0.02
IDH3A-217ENST00000559889 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
IDH3A-217ENST00000559889 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
IDH3A-217ENST00000559889 CHIC1Q5VXU3 224 aa15.15■□□□□ 0.02
IDH3A-217ENST00000559889 TSPOAP1O95153 1857 aa15.14■□□□□ 0.01
IDH3A-217ENST00000559889 P3H3Q8IVL6 736 aa15.14■□□□□ 0.01
IDH3A-217ENST00000559889 SAMD9Q5K651 1589 aa15.12■□□□□ 0.01
IDH3A-217ENST00000559889 PPRC1Q5VV67 1664 aaKnown RBP15.12■□□□□ 0.01
IDH3A-217ENST00000559889 WDR7Q9Y4E6 1490 aa15.11■□□□□ 0.01
IDH3A-217ENST00000559889 KDM6BO15054 1643 aa15.1■□□□□ 0.01
IDH3A-217ENST00000559889 MAP3K4Q9Y6R4 1608 aa15.09■□□□□ 0.01
IDH3A-217ENST00000559889 KIF21BO75037 1637 aa15.09■□□□□ 0.01
IDH3A-217ENST00000559889 ATP10BO94823 1461 aa15.06■□□□□ 0
IDH3A-217ENST00000559889 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
IDH3A-217ENST00000559889 COL17A1Q9UMD9 1497 aaPredicted RBP15.04■□□□□ -0
IDH3A-217ENST00000559889 ARID3CA6NKF2 412 aa15.04■□□□□ -0
IDH3A-217ENST00000559889 FHOD3Q2V2M9 1422 aa15.03■□□□□ -0
IDH3A-217ENST00000559889 KCNH8Q96L42 1107 aa15.03■□□□□ -0
IDH3A-217ENST00000559889 TEX14Q8IWB6 1497 aa15.02□□□□□ -0.01
IDH3A-217ENST00000559889 RAPGEF6Q8TEU7 1601 aa15.01□□□□□ -0.01
IDH3A-217ENST00000559889 CD109Q6YHK3 1445 aa15□□□□□ -0.01
IDH3A-217ENST00000559889 NUP153P49790 1475 aaKnown RBP15□□□□□ -0.01
IDH3A-217ENST00000559889 MAGI3Q5TCQ9 1506 aa14.99□□□□□ -0.01
IDH3A-217ENST00000559889 EFCAB5A4FU69 1503 aa14.98□□□□□ -0.01
IDH3A-217ENST00000559889 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
IDH3A-217ENST00000559889 CFAP43Q8NDM7 1665 aa14.98□□□□□ -0.01
IDH3A-217ENST00000559889 UBTFP17480 764 aaKnown RBP14.96□□□□□ -0.01
IDH3A-217ENST00000559889 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
IDH3A-217ENST00000559889 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
IDH3A-217ENST00000559889 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
IDH3A-217ENST00000559889 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
IDH3A-217ENST00000559889 ARHGAP35Q9NRY4 1499 aa14.91□□□□□ -0.02
IDH3A-217ENST00000559889 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
IDH3A-217ENST00000559889 PLEKHD1A6NEE1 506 aa14.87□□□□□ -0.03
IDH3A-217ENST00000559889 FMN1Q68DA7 1419 aa14.86□□□□□ -0.03
IDH3A-217ENST00000559889 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
IDH3A-217ENST00000559889 PHLDB1Q86UU1 1377 aa14.84□□□□□ -0.03
IDH3A-217ENST00000559889 ADGRL1O94910 1474 aa14.83□□□□□ -0.04
IDH3A-217ENST00000559889 NEO1Q92859 1461 aa14.82□□□□□ -0.04
IDH3A-217ENST00000559889 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.82□□□□□ -0.04
IDH3A-217ENST00000559889 RAPGEF3O95398 923 aa14.8□□□□□ -0.04
IDH3A-217ENST00000559889 HECW1Q76N89 1606 aa14.79□□□□□ -0.04
IDH3A-217ENST00000559889 TTC37Q6PGP7 1564 aa14.79□□□□□ -0.04
IDH3A-217ENST00000559889 ATP1B4Q9UN42 357 aaPredicted RBP14.78□□□□□ -0.04
IDH3A-217ENST00000559889 FRMPD1Q5SYB0 1578 aa14.77□□□□□ -0.05
IDH3A-217ENST00000559889 FANCAO15360 1455 aa14.76□□□□□ -0.05
IDH3A-217ENST00000559889 AKNAQ7Z591 1439 aa14.75□□□□□ -0.05
IDH3A-217ENST00000559889 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
IDH3A-217ENST00000559889 PLCH2O75038 1416 aa14.73□□□□□ -0.05
IDH3A-217ENST00000559889 CASKIN1Q8WXD9 1431 aa14.73□□□□□ -0.05
IDH3A-217ENST00000559889 CDK11AQ9UQ88 783 aaPredicted RBP14.72□□□□□ -0.05
IDH3A-217ENST00000559889 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
IDH3A-217ENST00000559889 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
IDH3A-217ENST00000559889 PCF11O94913 1555 aaKnown RBP14.72□□□□□ -0.05
IDH3A-217ENST00000559889 CLIP1P30622 1438 aa14.71□□□□□ -0.05
IDH3A-217ENST00000559889 CFAP74Q9C0B2 1584 aa14.71□□□□□ -0.05
IDH3A-217ENST00000559889 KIF14Q15058 1648 aa14.7□□□□□ -0.06
IDH3A-217ENST00000559889 RICTORQ6R327 1708 aa14.7□□□□□ -0.06
IDH3A-217ENST00000559889 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
IDH3A-217ENST00000559889 FYCO1Q9BQS8 1478 aa14.67□□□□□ -0.06
IDH3A-217ENST00000559889 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
IDH3A-217ENST00000559889 ZMYM4Q5VZL5 1548 aa14.66□□□□□ -0.06
IDH3A-217ENST00000559889 ARHGEF40Q8TER5 1519 aa14.65□□□□□ -0.06
IDH3A-217ENST00000559889 EFCAB2Q5VUJ9 269 aa14.65□□□□□ -0.06
IDH3A-217ENST00000559889 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
IDH3A-217ENST00000559889 POGZQ7Z3K3 1410 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms