RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 NUP160Q12769 1436 aa26.54■■□□□ 1.84
TNFAIP2-205ENST00000559406 TNIKQ9UKE5 1360 aa26.49■■□□□ 1.83
TNFAIP2-205ENST00000559406 KIAA0586Q9BVV6 1533 aa26.43■■□□□ 1.82
TNFAIP2-205ENST00000559406 IQGAP2Q13576 1575 aa26.42■■□□□ 1.82
TNFAIP2-205ENST00000559406 CLASP1Q7Z460 1538 aa26.42■■□□□ 1.82
TNFAIP2-205ENST00000559406 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
TNFAIP2-205ENST00000559406 OSCARQ8IYS5 282 aa26.34■■□□□ 1.81
TNFAIP2-205ENST00000559406 CEP162Q5TB80 1403 aa26.32■■□□□ 1.8
TNFAIP2-205ENST00000559406 SHROOM2Q13796 1616 aa26.3■■□□□ 1.8
TNFAIP2-205ENST00000559406 UGGT2Q9NYU1 1516 aa26.29■■□□□ 1.8
TNFAIP2-205ENST00000559406 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
TNFAIP2-205ENST00000559406 SAMD9Q5K651 1589 aa26.25■■□□□ 1.79
TNFAIP2-205ENST00000559406 CLIP1P30622 1438 aa26.25■■□□□ 1.79
TNFAIP2-205ENST00000559406 ARHGAP35Q9NRY4 1499 aa26.24■■□□□ 1.79
TNFAIP2-205ENST00000559406 DISP1Q96F81 1524 aa26.23■■□□□ 1.79
TNFAIP2-205ENST00000559406 ERCC6L2Q5T890 1561 aa26.21■■□□□ 1.79
TNFAIP2-205ENST00000559406 KIAA0556O60303 1618 aa26.18■■□□□ 1.78
TNFAIP2-205ENST00000559406 PRG4Q92954 1404 aaPredicted RBP26.18■■□□□ 1.78
TNFAIP2-205ENST00000559406 EFCAB5A4FU69 1503 aa26.17■■□□□ 1.78
TNFAIP2-205ENST00000559406 P3H3Q8IVL6 736 aa26.17■■□□□ 1.78
TNFAIP2-205ENST00000559406 ARAP1Q96P48 1450 aa26.15■■□□□ 1.78
TNFAIP2-205ENST00000559406 FHOD3Q2V2M9 1422 aa26.13■■□□□ 1.77
TNFAIP2-205ENST00000559406 CARMIL2Q6F5E8 1435 aa26.06■■□□□ 1.76
TNFAIP2-205ENST00000559406 ARHGEF11O15085 1522 aa26■■□□□ 1.75
TNFAIP2-205ENST00000559406 TTBK1Q5TCY1 1321 aaPredicted RBP25.98■■□□□ 1.75
TNFAIP2-205ENST00000559406 RIMBP3CA6NJZ7 1639 aa25.97■■□□□ 1.75
TNFAIP2-205ENST00000559406 RIMBP3BA6NNM3 1639 aa25.97■■□□□ 1.75
TNFAIP2-205ENST00000559406 RIMBP3Q9UFD9 1639 aa25.97■■□□□ 1.75
TNFAIP2-205ENST00000559406 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
TNFAIP2-205ENST00000559406 PTPRGP23470 1445 aa25.91■■□□□ 1.74
TNFAIP2-205ENST00000559406 PCF11O94913 1555 aaKnown RBP25.91■■□□□ 1.74
TNFAIP2-205ENST00000559406 FMN1Q68DA7 1419 aa25.89■■□□□ 1.74
TNFAIP2-205ENST00000559406 PLB1Q6P1J6 1458 aa25.88■■□□□ 1.73
TNFAIP2-205ENST00000559406 ABCA8O94911 1581 aa25.85■■□□□ 1.73
TNFAIP2-205ENST00000559406 RAPGEF6Q8TEU7 1601 aa25.85■■□□□ 1.73
TNFAIP2-205ENST00000559406 LRRIQ1Q96JM4 1722 aa25.85■■□□□ 1.73
TNFAIP2-205ENST00000559406 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
TNFAIP2-205ENST00000559406 FYCO1Q9BQS8 1478 aa25.79■■□□□ 1.72
TNFAIP2-205ENST00000559406 UACAQ9BZF9 1416 aa25.77■■□□□ 1.72
TNFAIP2-205ENST00000559406 NUP153P49790 1475 aaKnown RBP25.77■■□□□ 1.72
TNFAIP2-205ENST00000559406 HECW1Q76N89 1606 aa25.76■■□□□ 1.71
TNFAIP2-205ENST00000559406 ADCY10Q96PN6 1610 aa25.75■■□□□ 1.71
TNFAIP2-205ENST00000559406 DNAJC5Q9H3Z4 198 aa25.74■■□□□ 1.71
TNFAIP2-205ENST00000559406 ABCC2Q92887 1545 aa25.74■■□□□ 1.71
TNFAIP2-205ENST00000559406 ATP1B4Q9UN42 357 aaPredicted RBP25.73■■□□□ 1.71
TNFAIP2-205ENST00000559406 ARID3CA6NKF2 412 aa25.7■■□□□ 1.7
TNFAIP2-205ENST00000559406 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
TNFAIP2-205ENST00000559406 UHRF1BP1LA0JNW5 1464 aa25.7■■□□□ 1.7
TNFAIP2-205ENST00000559406 CDK13Q14004 1512 aaKnown RBP25.7■■□□□ 1.7
TNFAIP2-205ENST00000559406 EPRSP07814 1512 aaKnown RBP25.68■■□□□ 1.7
TNFAIP2-205ENST00000559406 CFAP43Q8NDM7 1665 aa25.66■■□□□ 1.7
TNFAIP2-205ENST00000559406 ATP10BO94823 1461 aa25.64■■□□□ 1.7
TNFAIP2-205ENST00000559406 TIAM1Q13009 1591 aa25.64■■□□□ 1.69
TNFAIP2-205ENST00000559406 ZCCHC11Q5TAX3 1644 aaKnown RBP25.62■■□□□ 1.69
TNFAIP2-205ENST00000559406 KDM5BQ9UGL1 1544 aa25.61■■□□□ 1.69
TNFAIP2-205ENST00000559406 CCDC18Q5T9S5 1454 aa25.6■■□□□ 1.69
TNFAIP2-205ENST00000559406 MAP3K1Q13233 1512 aa25.58■■□□□ 1.69
TNFAIP2-205ENST00000559406 MAGI3Q5TCQ9 1506 aa25.58■■□□□ 1.69
TNFAIP2-205ENST00000559406 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
TNFAIP2-205ENST00000559406 PPARGC1BQ86YN6 1023 aaKnown RBP25.55■■□□□ 1.68
TNFAIP2-205ENST00000559406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
TNFAIP2-205ENST00000559406 APLP2Q06481 763 aa25.51■■□□□ 1.67
TNFAIP2-205ENST00000559406 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
TNFAIP2-205ENST00000559406 LRRC9Q6ZRR7 1453 aa25.5■■□□□ 1.67
TNFAIP2-205ENST00000559406 EHBP1L1Q8N3D4 1523 aa25.43■■□□□ 1.66
TNFAIP2-205ENST00000559406 MTUS2Q5JR59 1369 aa25.42■■□□□ 1.66
TNFAIP2-205ENST00000559406 TROQ12816 1431 aaPredicted RBP25.41■■□□□ 1.66
TNFAIP2-205ENST00000559406 KIF14Q15058 1648 aa25.4■■□□□ 1.66
TNFAIP2-205ENST00000559406 ASXL2Q76L83 1435 aa25.4■■□□□ 1.66
TNFAIP2-205ENST00000559406 NPM1P06748 294 aaKnown RBP eCLIP25.39■■□□□ 1.66
TNFAIP2-205ENST00000559406 PLEKHD1A6NEE1 506 aa25.38■■□□□ 1.65
TNFAIP2-205ENST00000559406 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
TNFAIP2-205ENST00000559406 WDR7Q9Y4E6 1490 aa25.36■■□□□ 1.65
TNFAIP2-205ENST00000559406 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
TNFAIP2-205ENST00000559406 SUPT6HQ7KZ85 1726 aaKnown RBP25.35■■□□□ 1.65
TNFAIP2-205ENST00000559406 NCOA2Q15596 1464 aa25.31■■□□□ 1.64
TNFAIP2-205ENST00000559406 KCNH8Q96L42 1107 aa25.29■■□□□ 1.64
TNFAIP2-205ENST00000559406 ABCC10Q5T3U5 1492 aa25.28■■□□□ 1.64
TNFAIP2-205ENST00000559406 TTC37Q6PGP7 1564 aa25.28■■□□□ 1.64
TNFAIP2-205ENST00000559406 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.27■■□□□ 1.64
TNFAIP2-205ENST00000559406 PHLDB1Q86UU1 1377 aa25.26■■□□□ 1.63
TNFAIP2-205ENST00000559406 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
TNFAIP2-205ENST00000559406 ABCA9Q8IUA7 1624 aa25.21■■□□□ 1.63
TNFAIP2-205ENST00000559406 DIP2BQ9P265 1576 aa25.21■■□□□ 1.63
TNFAIP2-205ENST00000559406 KIF13AQ9H1H9 1805 aa25.18■■□□□ 1.62
TNFAIP2-205ENST00000559406 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
TNFAIP2-205ENST00000559406 CDC42BPBQ9Y5S2 1711 aa25.16■■□□□ 1.62
TNFAIP2-205ENST00000559406 MYO5CQ9NQX4 1742 aa25.16■■□□□ 1.62
TNFAIP2-205ENST00000559406 GLI2P10070 1586 aa25.14■■□□□ 1.62
TNFAIP2-205ENST00000559406 MYOM3Q5VTT5 1437 aa25.14■■□□□ 1.62
TNFAIP2-205ENST00000559406 CCNB3Q8WWL7 1395 aa25.14■■□□□ 1.61
TNFAIP2-205ENST00000559406 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
TNFAIP2-205ENST00000559406 ITSN2Q9NZM3 1697 aa25.13■■□□□ 1.61
TNFAIP2-205ENST00000559406 MAP3K4Q9Y6R4 1608 aa25.11■■□□□ 1.61
TNFAIP2-205ENST00000559406 FGD6Q6ZV73 1430 aa25.09■■□□□ 1.61
TNFAIP2-205ENST00000559406 FAM69CQ0P6D2 419 aa25.08■■□□□ 1.61
TNFAIP2-205ENST00000559406 PLCH2O75038 1416 aa25.07■■□□□ 1.6
TNFAIP2-205ENST00000559406 RRBP1Q9P2E9 1410 aaKnown RBP25.06■■□□□ 1.6
TNFAIP2-205ENST00000559406 CD109Q6YHK3 1445 aa25.05■■□□□ 1.6
TNFAIP2-205ENST00000559406 PTPN23Q9H3S7 1636 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms