RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
SNX1-207ENST00000559401 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
SNX1-207ENST00000559401 KIAA0586Q9BVV6 1533 aa13.88□□□□□ -0.19
SNX1-207ENST00000559401 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
SNX1-207ENST00000559401 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
SNX1-207ENST00000559401 IQGAP2Q13576 1575 aa13.83□□□□□ -0.19
SNX1-207ENST00000559401 CTTNBP2Q8WZ74 1663 aa13.8□□□□□ -0.2
SNX1-207ENST00000559401 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
SNX1-207ENST00000559401 CARMIL2Q6F5E8 1435 aa13.77□□□□□ -0.21
SNX1-207ENST00000559401 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
SNX1-207ENST00000559401 ADCY10Q96PN6 1610 aa13.73□□□□□ -0.21
SNX1-207ENST00000559401 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNX1-207ENST00000559401 PTPRGP23470 1445 aa13.72□□□□□ -0.21
SNX1-207ENST00000559401 EEA1Q15075 1411 aa13.72□□□□□ -0.21
SNX1-207ENST00000559401 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
SNX1-207ENST00000559401 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
SNX1-207ENST00000559401 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
SNX1-207ENST00000559401 DISP1Q96F81 1524 aa13.7□□□□□ -0.22
SNX1-207ENST00000559401 CSRNP3Q8WYN3 585 aa13.7□□□□□ -0.22
SNX1-207ENST00000559401 KIAA0556O60303 1618 aa13.7□□□□□ -0.22
SNX1-207ENST00000559401 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
SNX1-207ENST00000559401 KIF13AQ9H1H9 1805 aa13.66□□□□□ -0.22
SNX1-207ENST00000559401 GOLGA3Q08378 1498 aa13.65□□□□□ -0.22
SNX1-207ENST00000559401 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
SNX1-207ENST00000559401 UACAQ9BZF9 1416 aa13.62□□□□□ -0.23
SNX1-207ENST00000559401 KIF21BO75037 1637 aa13.61□□□□□ -0.23
SNX1-207ENST00000559401 ABCC2Q92887 1545 aa13.61□□□□□ -0.23
SNX1-207ENST00000559401 DIP2BQ9P265 1576 aa13.6□□□□□ -0.23
SNX1-207ENST00000559401 RANGAP1P46060 587 aaPredicted RBP13.59□□□□□ -0.23
SNX1-207ENST00000559401 EHMT2Q96KQ7 1210 aa13.59□□□□□ -0.23
SNX1-207ENST00000559401 UHRF1BP1LA0JNW5 1464 aa13.59□□□□□ -0.23
SNX1-207ENST00000559401 ABCC10Q5T3U5 1492 aa13.59□□□□□ -0.23
SNX1-207ENST00000559401 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
SNX1-207ENST00000559401 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
SNX1-207ENST00000559401 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
SNX1-207ENST00000559401 TSPOAP1O95153 1857 aa13.56□□□□□ -0.24
SNX1-207ENST00000559401 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
SNX1-207ENST00000559401 SAMD9Q5K651 1589 aa13.55□□□□□ -0.24
SNX1-207ENST00000559401 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
SNX1-207ENST00000559401 KDM5BQ9UGL1 1544 aa13.54□□□□□ -0.24
SNX1-207ENST00000559401 ABCA8O94911 1581 aa13.53□□□□□ -0.24
SNX1-207ENST00000559401 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
SNX1-207ENST00000559401 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
SNX1-207ENST00000559401 ARID3CA6NKF2 412 aa13.48□□□□□ -0.25
SNX1-207ENST00000559401 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
SNX1-207ENST00000559401 EFCAB5A4FU69 1503 aa13.48□□□□□ -0.25
SNX1-207ENST00000559401 GLI2P10070 1586 aa13.46□□□□□ -0.25
SNX1-207ENST00000559401 WDR7Q9Y4E6 1490 aa13.46□□□□□ -0.25
SNX1-207ENST00000559401 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
SNX1-207ENST00000559401 KDM6BO15054 1643 aa13.45□□□□□ -0.26
SNX1-207ENST00000559401 MAP3K4Q9Y6R4 1608 aa13.42□□□□□ -0.26
SNX1-207ENST00000559401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
SNX1-207ENST00000559401 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
SNX1-207ENST00000559401 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
SNX1-207ENST00000559401 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
SNX1-207ENST00000559401 ATP10BO94823 1461 aa13.4□□□□□ -0.26
SNX1-207ENST00000559401 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
SNX1-207ENST00000559401 NUP153P49790 1475 aaKnown RBP13.38□□□□□ -0.27
SNX1-207ENST00000559401 TEX14Q8IWB6 1497 aa13.38□□□□□ -0.27
SNX1-207ENST00000559401 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
SNX1-207ENST00000559401 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
SNX1-207ENST00000559401 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
SNX1-207ENST00000559401 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
SNX1-207ENST00000559401 CD109Q6YHK3 1445 aa13.34□□□□□ -0.27
SNX1-207ENST00000559401 CDK13Q14004 1512 aaKnown RBP13.32□□□□□ -0.28
SNX1-207ENST00000559401 ABCA9Q8IUA7 1624 aa13.31□□□□□ -0.28
SNX1-207ENST00000559401 MAGI3Q5TCQ9 1506 aa13.3□□□□□ -0.28
SNX1-207ENST00000559401 PLEKHD1A6NEE1 506 aa13.3□□□□□ -0.28
SNX1-207ENST00000559401 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.29
SNX1-207ENST00000559401 CLIP1P30622 1438 aa13.27□□□□□ -0.29
SNX1-207ENST00000559401 PCF11O94913 1555 aaKnown RBP13.27□□□□□ -0.29
SNX1-207ENST00000559401 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
SNX1-207ENST00000559401 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
SNX1-207ENST00000559401 TTC37Q6PGP7 1564 aa13.24□□□□□ -0.29
SNX1-207ENST00000559401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.23□□□□□ -0.29
SNX1-207ENST00000559401 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
SNX1-207ENST00000559401 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
SNX1-207ENST00000559401 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
SNX1-207ENST00000559401 KIF14Q15058 1648 aa13.21□□□□□ -0.3
SNX1-207ENST00000559401 NEO1Q92859 1461 aa13.2□□□□□ -0.3
SNX1-207ENST00000559401 FYCO1Q9BQS8 1478 aa13.2□□□□□ -0.3
SNX1-207ENST00000559401 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
SNX1-207ENST00000559401 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
SNX1-207ENST00000559401 ARAP3Q8WWN8 1544 aa13.18□□□□□ -0.3
SNX1-207ENST00000559401 CEP162Q5TB80 1403 aa13.18□□□□□ -0.3
SNX1-207ENST00000559401 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
SNX1-207ENST00000559401 FANCAO15360 1455 aa13.17□□□□□ -0.3
SNX1-207ENST00000559401 TROQ12816 1431 aaPredicted RBP13.17□□□□□ -0.3
SNX1-207ENST00000559401 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
SNX1-207ENST00000559401 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
SNX1-207ENST00000559401 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
SNX1-207ENST00000559401 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
SNX1-207ENST00000559401 LOC105371045A0A1W2PR82 267 aa13.13□□□□□ -0.31
SNX1-207ENST00000559401 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
SNX1-207ENST00000559401 RICTORQ6R327 1708 aa13.12□□□□□ -0.31
SNX1-207ENST00000559401 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
SNX1-207ENST00000559401 PLCH2O75038 1416 aa13.12□□□□□ -0.31
SNX1-207ENST00000559401 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
SNX1-207ENST00000559401 EFCAB2Q5VUJ9 269 aa13.09□□□□□ -0.31
SNX1-207ENST00000559401 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms