RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 KIF27Q86VH2 1401 aa26.68■■□□□ 1.86
IRF9-204ENST00000559229 RUSC2Q8N2Y8 1516 aa26.64■■□□□ 1.85
IRF9-204ENST00000559229 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
IRF9-204ENST00000559229 CUL7Q14999 1698 aa26.54■■□□□ 1.84
IRF9-204ENST00000559229 NPM1P06748 294 aaKnown RBP eCLIP26.53■■□□□ 1.84
IRF9-204ENST00000559229 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
IRF9-204ENST00000559229 FAM69CQ0P6D2 419 aa26.44■■□□□ 1.82
IRF9-204ENST00000559229 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
IRF9-204ENST00000559229 KIF13AQ9H1H9 1805 aa26.41■■□□□ 1.82
IRF9-204ENST00000559229 MAPKBP1O60336 1514 aa26.4■■□□□ 1.82
IRF9-204ENST00000559229 ADCY10Q96PN6 1610 aa26.39■■□□□ 1.82
IRF9-204ENST00000559229 PTPRGP23470 1445 aa26.38■■□□□ 1.81
IRF9-204ENST00000559229 CARMIL2Q6F5E8 1435 aa26.34■■□□□ 1.81
IRF9-204ENST00000559229 TNIKQ9UKE5 1360 aa26.32■■□□□ 1.8
IRF9-204ENST00000559229 TTBK1Q5TCY1 1321 aaPredicted RBP26.28■■□□□ 1.8
IRF9-204ENST00000559229 DIP2BQ9P265 1576 aa26.28■■□□□ 1.8
IRF9-204ENST00000559229 IQGAP2Q13576 1575 aa26.27■■□□□ 1.8
IRF9-204ENST00000559229 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
IRF9-204ENST00000559229 ABCC2Q92887 1545 aa26.2■■□□□ 1.79
IRF9-204ENST00000559229 DISP1Q96F81 1524 aa26.19■■□□□ 1.78
IRF9-204ENST00000559229 UHRF1BP1LA0JNW5 1464 aa26.17■■□□□ 1.78
IRF9-204ENST00000559229 UACAQ9BZF9 1416 aa26.15■■□□□ 1.78
IRF9-204ENST00000559229 UGGT2Q9NYU1 1516 aa26.14■■□□□ 1.78
IRF9-204ENST00000559229 PLB1Q6P1J6 1458 aa26.12■■□□□ 1.77
IRF9-204ENST00000559229 ASXL2Q76L83 1435 aa26.12■■□□□ 1.77
IRF9-204ENST00000559229 ILDR1Q86SU0 546 aaPredicted RBP26.08■■□□□ 1.77
IRF9-204ENST00000559229 KDM6BO15054 1643 aa26.06■■□□□ 1.76
IRF9-204ENST00000559229 KDM5BQ9UGL1 1544 aa26.04■■□□□ 1.76
IRF9-204ENST00000559229 KDM4FA0A1W2PPD8 638 aa26.04■■□□□ 1.76
IRF9-204ENST00000559229 TSPOAP1O95153 1857 aa26.03■■□□□ 1.76
IRF9-204ENST00000559229 GLI2P10070 1586 aa26.03■■□□□ 1.76
IRF9-204ENST00000559229 KIAA0556O60303 1618 aa26.02■■□□□ 1.76
IRF9-204ENST00000559229 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
IRF9-204ENST00000559229 EPRSP07814 1512 aaKnown RBP25.95■■□□□ 1.74
IRF9-204ENST00000559229 GOLGA3Q08378 1498 aa25.94■■□□□ 1.74
IRF9-204ENST00000559229 CTTNBP2Q8WZ74 1663 aa25.9■■□□□ 1.74
IRF9-204ENST00000559229 ZCCHC11Q5TAX3 1644 aaKnown RBP25.9■■□□□ 1.74
IRF9-204ENST00000559229 PPRC1Q5VV67 1664 aaKnown RBP25.89■■□□□ 1.73
IRF9-204ENST00000559229 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
IRF9-204ENST00000559229 MAP3K4Q9Y6R4 1608 aa25.84■■□□□ 1.73
IRF9-204ENST00000559229 TEX14Q8IWB6 1497 aa25.83■■□□□ 1.73
IRF9-204ENST00000559229 CSRNP3Q8WYN3 585 aa25.82■■□□□ 1.72
IRF9-204ENST00000559229 COL17A1Q9UMD9 1497 aaPredicted RBP25.82■■□□□ 1.72
IRF9-204ENST00000559229 ABCA8O94911 1581 aa25.82■■□□□ 1.72
IRF9-204ENST00000559229 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
IRF9-204ENST00000559229 KCNH8Q96L42 1107 aa25.76■■□□□ 1.71
IRF9-204ENST00000559229 P3H3Q8IVL6 736 aa25.74■■□□□ 1.71
IRF9-204ENST00000559229 CD109Q6YHK3 1445 aa25.73■■□□□ 1.71
IRF9-204ENST00000559229 MAGI3Q5TCQ9 1506 aa25.69■■□□□ 1.7
IRF9-204ENST00000559229 EEA1Q15075 1411 aa25.66■■□□□ 1.7
IRF9-204ENST00000559229 ATP10BO94823 1461 aa25.66■■□□□ 1.7
IRF9-204ENST00000559229 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
IRF9-204ENST00000559229 CFAP43Q8NDM7 1665 aa25.64■■□□□ 1.69
IRF9-204ENST00000559229 ADGRL1O94910 1474 aa25.63■■□□□ 1.69
IRF9-204ENST00000559229 SAMD9Q5K651 1589 aa25.6■■□□□ 1.69
IRF9-204ENST00000559229 RANGAP1P46060 587 aaPredicted RBP25.52■■□□□ 1.68
IRF9-204ENST00000559229 HECW2Q9P2P5 1572 aa25.52■■□□□ 1.68
IRF9-204ENST00000559229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.51■■□□□ 1.67
IRF9-204ENST00000559229 HNRNPUL2Q1KMD3 747 aaKnown RBP25.51■■□□□ 1.67
IRF9-204ENST00000559229 RAPGEF6Q8TEU7 1601 aa25.5■■□□□ 1.67
IRF9-204ENST00000559229 ARAP3Q8WWN8 1544 aa25.5■■□□□ 1.67
IRF9-204ENST00000559229 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
IRF9-204ENST00000559229 FHOD3Q2V2M9 1422 aa25.46■■□□□ 1.67
IRF9-204ENST00000559229 NUP153P49790 1475 aaKnown RBP25.46■■□□□ 1.67
IRF9-204ENST00000559229 ABCA9Q8IUA7 1624 aa25.45■■□□□ 1.67
IRF9-204ENST00000559229 PLEKHD1A6NEE1 506 aa25.4■■□□□ 1.66
IRF9-204ENST00000559229 NEO1Q92859 1461 aa25.39■■□□□ 1.65
IRF9-204ENST00000559229 KIF21BO75037 1637 aa25.38■■□□□ 1.65
IRF9-204ENST00000559229 RAPGEF3O95398 923 aa25.37■■□□□ 1.65
IRF9-204ENST00000559229 EFCAB5A4FU69 1503 aa25.36■■□□□ 1.65
IRF9-204ENST00000559229 UBTFP17480 764 aaKnown RBP25.3■■□□□ 1.64
IRF9-204ENST00000559229 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
IRF9-204ENST00000559229 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
IRF9-204ENST00000559229 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
IRF9-204ENST00000559229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.22■■□□□ 1.63
IRF9-204ENST00000559229 DENND4BO75064 1496 aaPredicted RBP25.21■■□□□ 1.63
IRF9-204ENST00000559229 FANCAO15360 1455 aa25.21■■□□□ 1.63
IRF9-204ENST00000559229 FRMPD1Q5SYB0 1578 aa25.2■■□□□ 1.62
IRF9-204ENST00000559229 FMN1Q68DA7 1419 aa25.19■■□□□ 1.62
IRF9-204ENST00000559229 FBXO41Q8TF61 875 aa25.18■■□□□ 1.62
IRF9-204ENST00000559229 CDK13Q14004 1512 aaKnown RBP25.17■■□□□ 1.62
IRF9-204ENST00000559229 ARID4BQ4LE39 1312 aaPredicted RBP25.17■■□□□ 1.62
IRF9-204ENST00000559229 ATP1B4Q9UN42 357 aaPredicted RBP25.17■■□□□ 1.62
IRF9-204ENST00000559229 ARHGAP35Q9NRY4 1499 aa25.15■■□□□ 1.62
IRF9-204ENST00000559229 ADAMTSL3P82987 1691 aa25.14■■□□□ 1.62
IRF9-204ENST00000559229 PTPRMP28827 1452 aa25.14■■□□□ 1.61
IRF9-204ENST00000559229 TTC37Q6PGP7 1564 aa25.14■■□□□ 1.61
IRF9-204ENST00000559229 CDK11AQ9UQ88 783 aaPredicted RBP25.13■■□□□ 1.61
IRF9-204ENST00000559229 CFAP74Q9C0B2 1584 aa25.13■■□□□ 1.61
IRF9-204ENST00000559229 PLCH2O75038 1416 aa25.12■■□□□ 1.61
IRF9-204ENST00000559229 RICTORQ6R327 1708 aa25.09■■□□□ 1.61
IRF9-204ENST00000559229 HECW1Q76N89 1606 aa25.08■■□□□ 1.6
IRF9-204ENST00000559229 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
IRF9-204ENST00000559229 BCORL1Q5H9F3 1711 aa25.07■■□□□ 1.6
IRF9-204ENST00000559229 SCAPERQ9BY12 1400 aa25.05■■□□□ 1.6
IRF9-204ENST00000559229 MAGI2Q86UL8 1455 aa25.05■■□□□ 1.6
IRF9-204ENST00000559229 EFCAB2Q5VUJ9 269 aa25.05■■□□□ 1.6
IRF9-204ENST00000559229 ZMYM4Q5VZL5 1548 aa25.05■■□□□ 1.6
IRF9-204ENST00000559229 YEATS2Q9ULM3 1422 aa25.02■■□□□ 1.6
IRF9-204ENST00000559229 POGZQ7Z3K3 1410 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms