RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 NISCHQ9Y2I1 1504 aa38.16■■■■□ 3.7
IRF9-204ENST00000559229 ABCC9O60706 1549 aa34.21■■■■□ 3.07
IRF9-204ENST00000559229 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
IRF9-204ENST00000559229 RB1CC1Q8TDY2 1594 aa32.56■■■□□ 2.8
IRF9-204ENST00000559229 DNAJC5BQ9UF47 199 aa32.52■■■□□ 2.8
IRF9-204ENST00000559229 NACADO15069 1562 aa32.36■■■□□ 2.77
IRF9-204ENST00000559229 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
IRF9-204ENST00000559229 MYO15BQ96JP2 1530 aa31.96■■■□□ 2.71
IRF9-204ENST00000559229 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
IRF9-204ENST00000559229 UNC13AQ9UPW8 1703 aa31.7■■■□□ 2.67
IRF9-204ENST00000559229 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
IRF9-204ENST00000559229 ZCCHC6Q5VYS8 1495 aaKnown RBP31.6■■■□□ 2.65
IRF9-204ENST00000559229 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
IRF9-204ENST00000559229 SHROOM4Q9ULL8 1493 aa31.22■■■□□ 2.59
IRF9-204ENST00000559229 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
IRF9-204ENST00000559229 CC2D2AQ9P2K1 1620 aa30.88■■■□□ 2.53
IRF9-204ENST00000559229 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
IRF9-204ENST00000559229 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
IRF9-204ENST00000559229 DNAJC5Q9H3Z4 198 aa30.34■■■□□ 2.45
IRF9-204ENST00000559229 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
IRF9-204ENST00000559229 ATAD2BQ9ULI0 1458 aa29.81■■■□□ 2.36
IRF9-204ENST00000559229 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
IRF9-204ENST00000559229 SMARCA2P51531 1590 aa29.7■■■□□ 2.35
IRF9-204ENST00000559229 HMGXB3Q12766 1538 aa29.64■■■□□ 2.34
IRF9-204ENST00000559229 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
IRF9-204ENST00000559229 ERCC6Q03468 1493 aa29.55■■■□□ 2.32
IRF9-204ENST00000559229 CUX2O14529 1486 aa29.51■■■□□ 2.31
IRF9-204ENST00000559229 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
IRF9-204ENST00000559229 PEG3Q9GZU2 1588 aa29.46■■■□□ 2.31
IRF9-204ENST00000559229 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.29
IRF9-204ENST00000559229 NESP48681 1621 aa29.38■■■□□ 2.29
IRF9-204ENST00000559229 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
IRF9-204ENST00000559229 PDS5BQ9NTI5 1447 aa29.08■■■□□ 2.25
IRF9-204ENST00000559229 THOC2Q8NI27 1593 aaKnown RBP29.04■■■□□ 2.24
IRF9-204ENST00000559229 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
IRF9-204ENST00000559229 WIZO95785 1651 aa28.98■■■□□ 2.23
IRF9-204ENST00000559229 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
IRF9-204ENST00000559229 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
IRF9-204ENST00000559229 MRC2Q9UBG0 1479 aa28.78■■■□□ 2.2
IRF9-204ENST00000559229 TRIM41Q8WV44 630 aa28.75■■■□□ 2.19
IRF9-204ENST00000559229 WDR62O43379 1518 aa28.69■■■□□ 2.18
IRF9-204ENST00000559229 CFTRP13569 1480 aa28.67■■■□□ 2.18
IRF9-204ENST00000559229 CEP164Q9UPV0 1460 aa28.66■■■□□ 2.18
IRF9-204ENST00000559229 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
IRF9-204ENST00000559229 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
IRF9-204ENST00000559229 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
IRF9-204ENST00000559229 CCDC88BA6NC98 1476 aa28.38■■■□□ 2.13
IRF9-204ENST00000559229 OSCARQ8IYS5 282 aa28.24■■■□□ 2.11
IRF9-204ENST00000559229 PRDM2Q13029 1718 aa28.21■■■□□ 2.11
IRF9-204ENST00000559229 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
IRF9-204ENST00000559229 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
IRF9-204ENST00000559229 ABCC8Q09428 1581 aa28.07■■■□□ 2.08
IRF9-204ENST00000559229 ZNF608Q9ULD9 1512 aaPredicted RBP28.05■■■□□ 2.08
IRF9-204ENST00000559229 DNMBPQ6XZF7 1577 aa27.97■■■□□ 2.07
IRF9-204ENST00000559229 EIF4G3O43432 1585 aaKnown RBP27.83■■■□□ 2.05
IRF9-204ENST00000559229 AQRO60306 1485 aaKnown RBP eCLIP27.83■■■□□ 2.044e-7■■■□□ 18.2
IRF9-204ENST00000559229 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
IRF9-204ENST00000559229 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
IRF9-204ENST00000559229 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
IRF9-204ENST00000559229 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
IRF9-204ENST00000559229 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
IRF9-204ENST00000559229 SOGA1O94964 1423 aa27.73■■■□□ 2.03
IRF9-204ENST00000559229 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
IRF9-204ENST00000559229 ARHGEF11O15085 1522 aa27.68■■■□□ 2.02
IRF9-204ENST00000559229 FBLN2P98095 1184 aa27.67■■■□□ 2.02
IRF9-204ENST00000559229 TDRD9Q8NDG6 1382 aaKnown RBP27.67■■■□□ 2.02
IRF9-204ENST00000559229 FGD5Q6ZNL6 1462 aa27.63■■■□□ 2.01
IRF9-204ENST00000559229 CUX1P39880 1505 aa27.6■■■□□ 2.01
IRF9-204ENST00000559229 CHD1O14646 1710 aa27.58■■■□□ 2.01
IRF9-204ENST00000559229 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
IRF9-204ENST00000559229 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
IRF9-204ENST00000559229 WDR97A6NE52 1622 aa27.55■■■□□ 2
IRF9-204ENST00000559229 SNAPC4Q5SXM2 1469 aa27.51■■□□□ 1.99
IRF9-204ENST00000559229 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
IRF9-204ENST00000559229 GRIN2BQ13224 1484 aa27.46■■□□□ 1.99
IRF9-204ENST00000559229 MAGI1Q96QZ7 1491 aaPredicted RBP27.46■■□□□ 1.99
IRF9-204ENST00000559229 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
IRF9-204ENST00000559229 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
IRF9-204ENST00000559229 GAPVD1Q14C86 1478 aa27.37■■□□□ 1.97
IRF9-204ENST00000559229 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
IRF9-204ENST00000559229 CLASP1Q7Z460 1538 aa27.35■■□□□ 1.97
IRF9-204ENST00000559229 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
IRF9-204ENST00000559229 SYNJ1O43426 1573 aa27.33■■□□□ 1.97
IRF9-204ENST00000559229 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
IRF9-204ENST00000559229 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
IRF9-204ENST00000559229 PBRM1Q86U86 1689 aa27.23■■□□□ 1.95
IRF9-204ENST00000559229 TOP2BQ02880 1626 aa27.16■■□□□ 1.94
IRF9-204ENST00000559229 BIVM-ERCC5R4GMW8 1640 aa27.12■■□□□ 1.93
IRF9-204ENST00000559229 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
IRF9-204ENST00000559229 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
IRF9-204ENST00000559229 FHAD1B1AJZ9 1412 aa27.04■■□□□ 1.92
IRF9-204ENST00000559229 ADAMTS12P58397 1594 aa27.02■■□□□ 1.92
IRF9-204ENST00000559229 NUP160Q12769 1436 aa27.02■■□□□ 1.92
IRF9-204ENST00000559229 ERICH3Q5RHP9 1530 aa26.99■■□□□ 1.91
IRF9-204ENST00000559229 CEP170Q5SW79 1584 aa26.96■■□□□ 1.91
IRF9-204ENST00000559229 ERCC6L2Q5T890 1561 aa26.91■■□□□ 1.9
IRF9-204ENST00000559229 SHROOM2Q13796 1616 aa26.83■■□□□ 1.89
IRF9-204ENST00000559229 JPH4Q96JJ6 628 aa26.81■■□□□ 1.88
IRF9-204ENST00000559229 PRG4Q92954 1404 aaPredicted RBP26.77■■□□□ 1.88
IRF9-204ENST00000559229 IGF1RP08069 1367 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms