RNA–Protein interactions for RNA: ENST00000558657.1

AC025040.2-201, humanhuman

BASIC

Gene AC025040.2, Length 1,852 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025040.2-201ENST00000558657 TOP2BQ02880 1626 aa11.74□□□□□ -0.53
AC025040.2-201ENST00000558657 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
AC025040.2-201ENST00000558657 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
AC025040.2-201ENST00000558657 ARAP1Q96P48 1450 aa11.73□□□□□ -0.53
AC025040.2-201ENST00000558657 KCNA4P22459 653 aa11.72□□□□□ -0.53
AC025040.2-201ENST00000558657 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
AC025040.2-201ENST00000558657 DNMBPQ6XZF7 1577 aa11.71□□□□□ -0.54
AC025040.2-201ENST00000558657 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.54
AC025040.2-201ENST00000558657 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
AC025040.2-201ENST00000558657 CHD1O14646 1710 aa11.7□□□□□ -0.54
AC025040.2-201ENST00000558657 TARBP1Q13395 1621 aaKnown RBP11.7□□□□□ -0.54
AC025040.2-201ENST00000558657 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
AC025040.2-201ENST00000558657 CLSPNQ9HAW4 1339 aa11.67□□□□□ -0.54
AC025040.2-201ENST00000558657 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
AC025040.2-201ENST00000558657 FBLN2P98095 1184 aa11.66□□□□□ -0.54
AC025040.2-201ENST00000558657 APLP2Q06481 763 aa11.65□□□□□ -0.54
AC025040.2-201ENST00000558657 TTBK1Q5TCY1 1321 aaPredicted RBP11.63□□□□□ -0.55
AC025040.2-201ENST00000558657 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
AC025040.2-201ENST00000558657 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
AC025040.2-201ENST00000558657 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
AC025040.2-201ENST00000558657 CUX1P39880 1505 aa11.6□□□□□ -0.55
AC025040.2-201ENST00000558657 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
AC025040.2-201ENST00000558657 RAD54L2Q9Y4B4 1467 aa11.59□□□□□ -0.55
AC025040.2-201ENST00000558657 TDRD9Q8NDG6 1382 aaKnown RBP11.59□□□□□ -0.55
AC025040.2-201ENST00000558657 WDR97A6NE52 1622 aa11.58□□□□□ -0.56
AC025040.2-201ENST00000558657 MYT1Q01538 1121 aa11.57□□□□□ -0.56
AC025040.2-201ENST00000558657 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
AC025040.2-201ENST00000558657 SNAPC4Q5SXM2 1469 aa11.56□□□□□ -0.56
AC025040.2-201ENST00000558657 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
AC025040.2-201ENST00000558657 MAGI1Q96QZ7 1491 aaPredicted RBP11.55□□□□□ -0.56
AC025040.2-201ENST00000558657 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
AC025040.2-201ENST00000558657 RRBP1Q9P2E9 1410 aaKnown RBP11.54□□□□□ -0.56
AC025040.2-201ENST00000558657 MAPK8IP2Q13387 824 aaPredicted RBP11.53□□□□□ -0.56
AC025040.2-201ENST00000558657 GRIN2BQ13224 1484 aa11.52□□□□□ -0.57
AC025040.2-201ENST00000558657 SYNJ2O15056 1496 aa11.51□□□□□ -0.57
AC025040.2-201ENST00000558657 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
AC025040.2-201ENST00000558657 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
AC025040.2-201ENST00000558657 DHX57Q6P158 1386 aaKnown RBP11.5□□□□□ -0.57
AC025040.2-201ENST00000558657 MIER1Q8N108 512 aa11.49□□□□□ -0.57
AC025040.2-201ENST00000558657 GAPVD1Q14C86 1478 aa11.49□□□□□ -0.57
AC025040.2-201ENST00000558657 ARHGAP35Q9NRY4 1499 aa11.44□□□□□ -0.58
AC025040.2-201ENST00000558657 NCBP3Q53F19 620 aaKnown RBP11.42□□□□□ -0.58
AC025040.2-201ENST00000558657 ABCA10Q8WWZ4 1543 aa11.42□□□□□ -0.58
AC025040.2-201ENST00000558657 CCNB3Q8WWL7 1395 aa11.42□□□□□ -0.58
AC025040.2-201ENST00000558657 PBRM1Q86U86 1689 aa11.41□□□□□ -0.58
AC025040.2-201ENST00000558657 KANK4Q5T7N3 995 aaPredicted RBP11.4□□□□□ -0.59
AC025040.2-201ENST00000558657 TIAM1Q13009 1591 aa11.39□□□□□ -0.59
AC025040.2-201ENST00000558657 YTHDC1Q96MU7 727 aaKnown RBP11.38□□□□□ -0.59
AC025040.2-201ENST00000558657 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
AC025040.2-201ENST00000558657 CUL7Q14999 1698 aa11.38□□□□□ -0.59
AC025040.2-201ENST00000558657 CNKSR2Q8WXI2 1034 aa11.37□□□□□ -0.59
AC025040.2-201ENST00000558657 ERCC6L2Q5T890 1561 aa11.37□□□□□ -0.59
AC025040.2-201ENST00000558657 GRIN2AQ12879 1464 aa11.36□□□□□ -0.59
AC025040.2-201ENST00000558657 NUP160Q12769 1436 aa11.36□□□□□ -0.59
AC025040.2-201ENST00000558657 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
AC025040.2-201ENST00000558657 IGF1RP08069 1367 aa11.35□□□□□ -0.59
AC025040.2-201ENST00000558657 RANGAP1P46060 587 aaPredicted RBP11.35□□□□□ -0.59
AC025040.2-201ENST00000558657 CFAP43Q8NDM7 1665 aa11.35□□□□□ -0.59
AC025040.2-201ENST00000558657 CEP170Q5SW79 1584 aa11.35□□□□□ -0.59
AC025040.2-201ENST00000558657 FHAD1B1AJZ9 1412 aa11.33□□□□□ -0.59
AC025040.2-201ENST00000558657 SHROOM2Q13796 1616 aa11.33□□□□□ -0.6
AC025040.2-201ENST00000558657 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
AC025040.2-201ENST00000558657 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
AC025040.2-201ENST00000558657 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
AC025040.2-201ENST00000558657 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
AC025040.2-201ENST00000558657 SETD5Q9C0A6 1442 aa11.3□□□□□ -0.6
AC025040.2-201ENST00000558657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.3□□□□□ -0.6
AC025040.2-201ENST00000558657 MAPKBP1O60336 1514 aa11.3□□□□□ -0.6
AC025040.2-201ENST00000558657 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
AC025040.2-201ENST00000558657 KIF13AQ9H1H9 1805 aa11.29□□□□□ -0.6
AC025040.2-201ENST00000558657 EFCAB5A4FU69 1503 aa11.29□□□□□ -0.6
AC025040.2-201ENST00000558657 CTTNBP2Q8WZ74 1663 aa11.26□□□□□ -0.61
AC025040.2-201ENST00000558657 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
AC025040.2-201ENST00000558657 PRG4Q92954 1404 aaPredicted RBP11.25□□□□□ -0.61
AC025040.2-201ENST00000558657 JPH4Q96JJ6 628 aa11.25□□□□□ -0.61
AC025040.2-201ENST00000558657 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
AC025040.2-201ENST00000558657 ABCC10Q5T3U5 1492 aa11.24□□□□□ -0.61
AC025040.2-201ENST00000558657 FAM69CQ0P6D2 419 aa11.23□□□□□ -0.61
AC025040.2-201ENST00000558657 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
AC025040.2-201ENST00000558657 PHLDB1Q86UU1 1377 aa11.22□□□□□ -0.61
AC025040.2-201ENST00000558657 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.61
AC025040.2-201ENST00000558657 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
AC025040.2-201ENST00000558657 SUPT16HQ9Y5B9 1047 aaKnown RBP11.21□□□□□ -0.62
AC025040.2-201ENST00000558657 KDM4FA0A1W2PPD8 638 aa11.19□□□□□ -0.62
AC025040.2-201ENST00000558657 DIP2BQ9P265 1576 aa11.17□□□□□ -0.62
AC025040.2-201ENST00000558657 FMN1Q68DA7 1419 aa11.16□□□□□ -0.62
AC025040.2-201ENST00000558657 ITGAEP38570 1179 aa11.16□□□□□ -0.62
AC025040.2-201ENST00000558657 KDM6BO15054 1643 aa11.14□□□□□ -0.63
AC025040.2-201ENST00000558657 ADCY10Q96PN6 1610 aa11.14□□□□□ -0.63
AC025040.2-201ENST00000558657 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
AC025040.2-201ENST00000558657 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
AC025040.2-201ENST00000558657 SAMD9Q5K651 1589 aa11.13□□□□□ -0.63
AC025040.2-201ENST00000558657 PPP1R15AO75807 674 aaPredicted RBP11.12□□□□□ -0.63
AC025040.2-201ENST00000558657 FAM50AQ14320 339 aaKnown RBP11.12□□□□□ -0.63
AC025040.2-201ENST00000558657 FGD6Q6ZV73 1430 aa11.12□□□□□ -0.63
AC025040.2-201ENST00000558657 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
AC025040.2-201ENST00000558657 FHOD3Q2V2M9 1422 aa11.12□□□□□ -0.63
AC025040.2-201ENST00000558657 RNF216Q9NWF9 866 aaPredicted RBP11.1□□□□□ -0.63
AC025040.2-201ENST00000558657 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
AC025040.2-201ENST00000558657 HFM1A2PYH4 1435 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms