RNA–Protein interactions for RNA: ENST00000558657.1

AC025040.2-201, humanhuman

BASIC

Gene AC025040.2, Length 1,852 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025040.2-201ENST00000558657 AEBP2Q6ZN18 517 aaPredicted RBP16.66■□□□□ 0.26
AC025040.2-201ENST00000558657 CHIC1Q5VXU3 224 aa16.32■□□□□ 0.2
AC025040.2-201ENST00000558657 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
AC025040.2-201ENST00000558657 ABCC9O60706 1549 aa14.57□□□□□ -0.08
AC025040.2-201ENST00000558657 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
AC025040.2-201ENST00000558657 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
AC025040.2-201ENST00000558657 SENP3Q9H4L4 574 aaPredicted RBP14.01□□□□□ -0.17
AC025040.2-201ENST00000558657 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
AC025040.2-201ENST00000558657 RB1CC1Q8TDY2 1594 aa13.77□□□□□ -0.2
AC025040.2-201ENST00000558657 NACADO15069 1562 aa13.64□□□□□ -0.23
AC025040.2-201ENST00000558657 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
AC025040.2-201ENST00000558657 PABPN1Q86U42 306 aaKnown RBP eCLIP13.53□□□□□ -0.24
AC025040.2-201ENST00000558657 DCAF1Q9Y4B6 1507 aa13.46□□□□□ -0.26
AC025040.2-201ENST00000558657 DCAF8L2P0C7V8 631 aa13.44□□□□□ -0.26
AC025040.2-201ENST00000558657 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
AC025040.2-201ENST00000558657 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
AC025040.2-201ENST00000558657 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
AC025040.2-201ENST00000558657 BICRAQ9NZM4 1560 aa13.39□□□□□ -0.27
AC025040.2-201ENST00000558657 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
AC025040.2-201ENST00000558657 SUPT5HO00267 1087 aaKnown RBP13.25□□□□□ -0.29
AC025040.2-201ENST00000558657 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
AC025040.2-201ENST00000558657 CC2D2AQ9P2K1 1620 aa13.15□□□□□ -0.3
AC025040.2-201ENST00000558657 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
AC025040.2-201ENST00000558657 FOXD1Q16676 465 aa13.06□□□□□ -0.32
AC025040.2-201ENST00000558657 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
AC025040.2-201ENST00000558657 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
AC025040.2-201ENST00000558657 HRCP23327 699 aa12.92□□□□□ -0.34
AC025040.2-201ENST00000558657 ADRA2BP18089 450 aa12.73□□□□□ -0.37
AC025040.2-201ENST00000558657 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
AC025040.2-201ENST00000558657 CUX2O14529 1486 aa12.71□□□□□ -0.38
AC025040.2-201ENST00000558657 PCGF6Q9BYE7 350 aa12.7□□□□□ -0.38
AC025040.2-201ENST00000558657 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
AC025040.2-201ENST00000558657 NCAPD3P42695 1498 aa12.61□□□□□ -0.39
AC025040.2-201ENST00000558657 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
AC025040.2-201ENST00000558657 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
AC025040.2-201ENST00000558657 LOC105371045A0A1W2PR82 267 aa12.57□□□□□ -0.4
AC025040.2-201ENST00000558657 ATAD2BQ9ULI0 1458 aa12.51□□□□□ -0.41
AC025040.2-201ENST00000558657 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
AC025040.2-201ENST00000558657 BAZ1AQ9NRL2 1556 aaPredicted RBP12.48□□□□□ -0.41
AC025040.2-201ENST00000558657 HMGXB3Q12766 1538 aa12.46□□□□□ -0.41
AC025040.2-201ENST00000558657 SMARCA2P51531 1590 aa12.45□□□□□ -0.42
AC025040.2-201ENST00000558657 TRIM41Q8WV44 630 aa12.45□□□□□ -0.42
AC025040.2-201ENST00000558657 NESP48681 1621 aa12.44□□□□□ -0.42
AC025040.2-201ENST00000558657 PPARGC1BQ86YN6 1023 aaKnown RBP12.42□□□□□ -0.42
AC025040.2-201ENST00000558657 SMARCA4P51532 1647 aa12.41□□□□□ -0.42
AC025040.2-201ENST00000558657 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
AC025040.2-201ENST00000558657 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
AC025040.2-201ENST00000558657 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
AC025040.2-201ENST00000558657 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
AC025040.2-201ENST00000558657 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
AC025040.2-201ENST00000558657 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
AC025040.2-201ENST00000558657 WIZO95785 1651 aa12.31□□□□□ -0.44
AC025040.2-201ENST00000558657 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
AC025040.2-201ENST00000558657 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
AC025040.2-201ENST00000558657 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
AC025040.2-201ENST00000558657 CADPSQ9ULU8 1353 aa12.2□□□□□ -0.46
AC025040.2-201ENST00000558657 FAM9AQ8IZU1 332 aaPredicted RBP12.19□□□□□ -0.46
AC025040.2-201ENST00000558657 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
AC025040.2-201ENST00000558657 WDR62O43379 1518 aa12.16□□□□□ -0.46
AC025040.2-201ENST00000558657 WRNQ14191 1432 aaPredicted RBP eCLIP12.13□□□□□ -0.47
AC025040.2-201ENST00000558657 EEA1Q15075 1411 aa12.11□□□□□ -0.47
AC025040.2-201ENST00000558657 OSCARQ8IYS5 282 aa12.09□□□□□ -0.47
AC025040.2-201ENST00000558657 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
AC025040.2-201ENST00000558657 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
AC025040.2-201ENST00000558657 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
AC025040.2-201ENST00000558657 TNIKQ9UKE5 1360 aa12.04□□□□□ -0.48
AC025040.2-201ENST00000558657 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
AC025040.2-201ENST00000558657 ABCC8Q09428 1581 aa12.02□□□□□ -0.49
AC025040.2-201ENST00000558657 CFTRP13569 1480 aa12□□□□□ -0.49
AC025040.2-201ENST00000558657 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
AC025040.2-201ENST00000558657 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
AC025040.2-201ENST00000558657 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
AC025040.2-201ENST00000558657 CCER1Q8TC90 406 aaPredicted RBP11.95□□□□□ -0.5
AC025040.2-201ENST00000558657 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
AC025040.2-201ENST00000558657 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
AC025040.2-201ENST00000558657 PRDM2Q13029 1718 aa11.93□□□□□ -0.5
AC025040.2-201ENST00000558657 SOGA1O94964 1423 aa11.93□□□□□ -0.5
AC025040.2-201ENST00000558657 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
AC025040.2-201ENST00000558657 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
AC025040.2-201ENST00000558657 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
AC025040.2-201ENST00000558657 KIF21BO75037 1637 aa11.91□□□□□ -0.5
AC025040.2-201ENST00000558657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
AC025040.2-201ENST00000558657 MSH5O43196 834 aa11.89□□□□□ -0.51
AC025040.2-201ENST00000558657 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
AC025040.2-201ENST00000558657 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
AC025040.2-201ENST00000558657 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
AC025040.2-201ENST00000558657 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
AC025040.2-201ENST00000558657 ZNF608Q9ULD9 1512 aaPredicted RBP11.84□□□□□ -0.51
AC025040.2-201ENST00000558657 ACIN1Q9UKV3 1341 aaKnown RBP11.83□□□□□ -0.52
AC025040.2-201ENST00000558657 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
AC025040.2-201ENST00000558657 UBTFP17480 764 aaKnown RBP11.8□□□□□ -0.52
AC025040.2-201ENST00000558657 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
AC025040.2-201ENST00000558657 CENPBP07199 599 aaPredicted RBP11.79□□□□□ -0.52
AC025040.2-201ENST00000558657 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
AC025040.2-201ENST00000558657 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
AC025040.2-201ENST00000558657 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.53
AC025040.2-201ENST00000558657 VPS8Q8N3P4 1428 aa11.76□□□□□ -0.53
AC025040.2-201ENST00000558657 CLIP1P30622 1438 aa11.75□□□□□ -0.53
AC025040.2-201ENST00000558657 BIVM-ERCC5R4GMW8 1640 aa11.75□□□□□ -0.53
AC025040.2-201ENST00000558657 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms