RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 CUL7Q14999 1698 aa32.56■■■□□ 2.8
RMDN3-206ENST00000558560 IGF1RP08069 1367 aa32.54■■■□□ 2.8
RMDN3-206ENST00000558560 KIAA0586Q9BVV6 1533 aa32.5■■■□□ 2.79
RMDN3-206ENST00000558560 KIF13AQ9H1H9 1805 aa32.41■■■□□ 2.78
RMDN3-206ENST00000558560 NPM1P06748 294 aaKnown RBP eCLIP32.34■■■□□ 2.77
RMDN3-206ENST00000558560 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.77
RMDN3-206ENST00000558560 MAPKBP1O60336 1514 aa32.32■■■□□ 2.76
RMDN3-206ENST00000558560 ADCY10Q96PN6 1610 aa32.28■■■□□ 2.76
RMDN3-206ENST00000558560 ABCC10Q5T3U5 1492 aa32.27■■■□□ 2.76
RMDN3-206ENST00000558560 AEBP2Q6ZN18 517 aaPredicted RBP32.18■■■□□ 2.74
RMDN3-206ENST00000558560 CARMIL2Q6F5E8 1435 aa32.17■■■□□ 2.74
RMDN3-206ENST00000558560 FAM69CQ0P6D2 419 aa32.17■■■□□ 2.74
RMDN3-206ENST00000558560 PTPRGP23470 1445 aa32.16■■■□□ 2.74
RMDN3-206ENST00000558560 DIP2BQ9P265 1576 aa32.15■■■□□ 2.74
RMDN3-206ENST00000558560 IQGAP2Q13576 1575 aa32.15■■■□□ 2.74
RMDN3-206ENST00000558560 TNIKQ9UKE5 1360 aa32.12■■■□□ 2.73
RMDN3-206ENST00000558560 RAPGEF2Q9Y4G8 1499 aa32.04■■■□□ 2.72
RMDN3-206ENST00000558560 ABCC2Q92887 1545 aa32.01■■■□□ 2.72
RMDN3-206ENST00000558560 UHRF1BP1LA0JNW5 1464 aa32■■■□□ 2.71
RMDN3-206ENST00000558560 UGGT2Q9NYU1 1516 aa31.97■■■□□ 2.71
RMDN3-206ENST00000558560 DISP1Q96F81 1524 aa31.96■■■□□ 2.71
RMDN3-206ENST00000558560 UACAQ9BZF9 1416 aa31.92■■■□□ 2.7
RMDN3-206ENST00000558560 PLB1Q6P1J6 1458 aa31.92■■■□□ 2.7
RMDN3-206ENST00000558560 TSPOAP1O95153 1857 aa31.91■■■□□ 2.7
RMDN3-206ENST00000558560 GLI2P10070 1586 aa31.88■■■□□ 2.69
RMDN3-206ENST00000558560 KDM6BO15054 1643 aa31.88■■■□□ 2.69
RMDN3-206ENST00000558560 ASXL2Q76L83 1435 aa31.86■■■□□ 2.69
RMDN3-206ENST00000558560 TTBK1Q5TCY1 1321 aaPredicted RBP31.85■■■□□ 2.69
RMDN3-206ENST00000558560 KIAA0556O60303 1618 aa31.83■■■□□ 2.69
RMDN3-206ENST00000558560 KDM5BQ9UGL1 1544 aa31.83■■■□□ 2.69
RMDN3-206ENST00000558560 CTTNBP2Q8WZ74 1663 aa31.82■■■□□ 2.68
RMDN3-206ENST00000558560 GOLGA3Q08378 1498 aa31.74■■■□□ 2.67
RMDN3-206ENST00000558560 PRXQ9BXM0 1461 aa31.72■■■□□ 2.67
RMDN3-206ENST00000558560 PPRC1Q5VV67 1664 aaKnown RBP31.71■■■□□ 2.67
RMDN3-206ENST00000558560 ZCCHC11Q5TAX3 1644 aaKnown RBP31.71■■■□□ 2.67
RMDN3-206ENST00000558560 EPRSP07814 1512 aaKnown RBP31.68■■■□□ 2.66
RMDN3-206ENST00000558560 MAP3K4Q9Y6R4 1608 aa31.66■■■□□ 2.66
RMDN3-206ENST00000558560 TEX14Q8IWB6 1497 aa31.6■■■□□ 2.65
RMDN3-206ENST00000558560 ABCA8O94911 1581 aa31.57■■■□□ 2.64
RMDN3-206ENST00000558560 WDR7Q9Y4E6 1490 aa31.57■■■□□ 2.64
RMDN3-206ENST00000558560 KDM4FA0A1W2PPD8 638 aa31.52■■■□□ 2.64
RMDN3-206ENST00000558560 FAM9AQ8IZU1 332 aaPredicted RBP31.51■■■□□ 2.63
RMDN3-206ENST00000558560 CFAP43Q8NDM7 1665 aa31.45■■■□□ 2.63
RMDN3-206ENST00000558560 CSRNP3Q8WYN3 585 aa31.45■■■□□ 2.63
RMDN3-206ENST00000558560 COL17A1Q9UMD9 1497 aaPredicted RBP31.44■■■□□ 2.62
RMDN3-206ENST00000558560 MAGI3Q5TCQ9 1506 aa31.42■■■□□ 2.62
RMDN3-206ENST00000558560 EEA1Q15075 1411 aa31.41■■■□□ 2.62
RMDN3-206ENST00000558560 CD109Q6YHK3 1445 aa31.38■■■□□ 2.61
RMDN3-206ENST00000558560 SAMD9Q5K651 1589 aa31.34■■■□□ 2.61
RMDN3-206ENST00000558560 KCNH8Q96L42 1107 aa31.3■■■□□ 2.6
RMDN3-206ENST00000558560 ATP10BO94823 1461 aa31.28■■■□□ 2.6
RMDN3-206ENST00000558560 ADGRL1O94910 1474 aa31.27■■■□□ 2.6
RMDN3-206ENST00000558560 P3H3Q8IVL6 736 aa31.23■■■□□ 2.59
RMDN3-206ENST00000558560 RAPGEF6Q8TEU7 1601 aa31.21■■■□□ 2.59
RMDN3-206ENST00000558560 PHLDB1Q86UU1 1377 aa31.2■■■□□ 2.59
RMDN3-206ENST00000558560 ARAP3Q8WWN8 1544 aa31.19■■■□□ 2.58
RMDN3-206ENST00000558560 ABCA9Q8IUA7 1624 aa31.18■■■□□ 2.58
RMDN3-206ENST00000558560 KIF21BO75037 1637 aa31.1■■■□□ 2.57
RMDN3-206ENST00000558560 ARID3CA6NKF2 412 aa31.07■■■□□ 2.56
RMDN3-206ENST00000558560 EFCAB5A4FU69 1503 aa31.07■■■□□ 2.56
RMDN3-206ENST00000558560 NUP153P49790 1475 aaKnown RBP31.07■■■□□ 2.56
RMDN3-206ENST00000558560 NEO1Q92859 1461 aa31.05■■■□□ 2.56
RMDN3-206ENST00000558560 FHOD3Q2V2M9 1422 aa31.01■■■□□ 2.55
RMDN3-206ENST00000558560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31■■■□□ 2.55
RMDN3-206ENST00000558560 HNRNPUL2Q1KMD3 747 aaKnown RBP31■■■□□ 2.55
RMDN3-206ENST00000558560 PLEKHD1A6NEE1 506 aa30.96■■■□□ 2.55
RMDN3-206ENST00000558560 RANGAP1P46060 587 aaPredicted RBP30.91■■■□□ 2.54
RMDN3-206ENST00000558560 HECW2Q9P2P5 1572 aa30.86■■■□□ 2.53
RMDN3-206ENST00000558560 CFAP74Q9C0B2 1584 aa30.85■■■□□ 2.53
RMDN3-206ENST00000558560 RAPGEF3O95398 923 aa30.84■■■□□ 2.53
RMDN3-206ENST00000558560 FRMPD1Q5SYB0 1578 aa30.82■■■□□ 2.52
RMDN3-206ENST00000558560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.8■■■□□ 2.52
RMDN3-206ENST00000558560 ADAMTSL3P82987 1691 aa30.79■■■□□ 2.52
RMDN3-206ENST00000558560 FMN1Q68DA7 1419 aa30.79■■■□□ 2.52
RMDN3-206ENST00000558560 DENND4BO75064 1496 aaPredicted RBP30.77■■■□□ 2.52
RMDN3-206ENST00000558560 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
RMDN3-206ENST00000558560 RICTORQ6R327 1708 aa30.77■■■□□ 2.52
RMDN3-206ENST00000558560 AKNAQ7Z591 1439 aa30.77■■■□□ 2.52
RMDN3-206ENST00000558560 FANCAO15360 1455 aa30.76■■■□□ 2.52
RMDN3-206ENST00000558560 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
RMDN3-206ENST00000558560 TTC37Q6PGP7 1564 aa30.72■■■□□ 2.51
RMDN3-206ENST00000558560 BCORL1Q5H9F3 1711 aa30.72■■■□□ 2.51
RMDN3-206ENST00000558560 HECW1Q76N89 1606 aa30.71■■■□□ 2.51
RMDN3-206ENST00000558560 CDK13Q14004 1512 aaKnown RBP30.7■■■□□ 2.51
RMDN3-206ENST00000558560 ARHGEF40Q8TER5 1519 aa30.7■■■□□ 2.51
RMDN3-206ENST00000558560 ARHGAP35Q9NRY4 1499 aa30.69■■■□□ 2.5
RMDN3-206ENST00000558560 ZMYM4Q5VZL5 1548 aa30.68■■■□□ 2.5
RMDN3-206ENST00000558560 PTPRMP28827 1452 aa30.68■■■□□ 2.5
RMDN3-206ENST00000558560 CDK11AQ9UQ88 783 aaPredicted RBP30.67■■■□□ 2.5
RMDN3-206ENST00000558560 MAGI2Q86UL8 1455 aa30.66■■■□□ 2.5
RMDN3-206ENST00000558560 PLCH2O75038 1416 aa30.65■■■□□ 2.5
RMDN3-206ENST00000558560 ARID4BQ4LE39 1312 aaPredicted RBP30.62■■■□□ 2.49
RMDN3-206ENST00000558560 MYO5CQ9NQX4 1742 aa30.59■■■□□ 2.49
RMDN3-206ENST00000558560 MADDQ8WXG6 1647 aa30.57■■■□□ 2.48
RMDN3-206ENST00000558560 POGZQ7Z3K3 1410 aa30.56■■■□□ 2.48
RMDN3-206ENST00000558560 ZFYVE16Q7Z3T8 1539 aa30.56■■■□□ 2.48
RMDN3-206ENST00000558560 ILDR1Q86SU0 546 aaPredicted RBP30.55■■■□□ 2.48
RMDN3-206ENST00000558560 EFCAB2Q5VUJ9 269 aa30.54■■■□□ 2.48
RMDN3-206ENST00000558560 ATP1B4Q9UN42 357 aaPredicted RBP30.54■■■□□ 2.48
RMDN3-206ENST00000558560 SCAPERQ9BY12 1400 aa30.54■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms