RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
RABGGTA-204ENST00000558376 FAM69CQ0P6D2 419 aa19.64■□□□□ 0.73
RABGGTA-204ENST00000558376 ABCC10Q5T3U5 1492 aa19.62■□□□□ 0.73
RABGGTA-204ENST00000558376 ADCY10Q96PN6 1610 aa19.61■□□□□ 0.73
RABGGTA-204ENST00000558376 NPM1P06748 294 aaKnown RBP eCLIP19.6■□□□□ 0.73
RABGGTA-204ENST00000558376 IGF1RP08069 1367 aa19.6■□□□□ 0.73
RABGGTA-204ENST00000558376 MAPKBP1O60336 1514 aa19.59■□□□□ 0.73
RABGGTA-204ENST00000558376 KIAA0586Q9BVV6 1533 aa19.58■□□□□ 0.72
RABGGTA-204ENST00000558376 DIP2BQ9P265 1576 aa19.56■□□□□ 0.72
RABGGTA-204ENST00000558376 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
RABGGTA-204ENST00000558376 CUL7Q14999 1698 aa19.51■□□□□ 0.71
RABGGTA-204ENST00000558376 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
RABGGTA-204ENST00000558376 PTPRGP23470 1445 aa19.46■□□□□ 0.71
RABGGTA-204ENST00000558376 CARMIL1Q5VZK9 1371 aa19.45■□□□□ 0.7
RABGGTA-204ENST00000558376 KDM6BO15054 1643 aa19.44■□□□□ 0.7
RABGGTA-204ENST00000558376 TTBK1Q5TCY1 1321 aaPredicted RBP19.44■□□□□ 0.7
RABGGTA-204ENST00000558376 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
RABGGTA-204ENST00000558376 TNIKQ9UKE5 1360 aa19.39■□□□□ 0.69
RABGGTA-204ENST00000558376 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
RABGGTA-204ENST00000558376 ABCC2Q92887 1545 aa19.36■□□□□ 0.69
RABGGTA-204ENST00000558376 IQGAP2Q13576 1575 aa19.34■□□□□ 0.69
RABGGTA-204ENST00000558376 ASXL2Q76L83 1435 aa19.34■□□□□ 0.69
RABGGTA-204ENST00000558376 PPRC1Q5VV67 1664 aaKnown RBP19.32■□□□□ 0.68
RABGGTA-204ENST00000558376 DISP1Q96F81 1524 aa19.31■□□□□ 0.68
RABGGTA-204ENST00000558376 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
RABGGTA-204ENST00000558376 PLB1Q6P1J6 1458 aa19.3■□□□□ 0.68
RABGGTA-204ENST00000558376 GLI2P10070 1586 aa19.3■□□□□ 0.68
RABGGTA-204ENST00000558376 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
RABGGTA-204ENST00000558376 UGGT2Q9NYU1 1516 aa19.23■□□□□ 0.67
RABGGTA-204ENST00000558376 COL17A1Q9UMD9 1497 aaPredicted RBP19.23■□□□□ 0.67
RABGGTA-204ENST00000558376 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
RABGGTA-204ENST00000558376 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
RABGGTA-204ENST00000558376 EPRSP07814 1512 aaKnown RBP19.22■□□□□ 0.67
RABGGTA-204ENST00000558376 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-204ENST00000558376 MAP3K4Q9Y6R4 1608 aa19.19■□□□□ 0.66
RABGGTA-204ENST00000558376 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
RABGGTA-204ENST00000558376 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
RABGGTA-204ENST00000558376 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
RABGGTA-204ENST00000558376 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
RABGGTA-204ENST00000558376 CTTNBP2Q8WZ74 1663 aa19.08■□□□□ 0.64
RABGGTA-204ENST00000558376 ILDR1Q86SU0 546 aaPredicted RBP19.05■□□□□ 0.64
RABGGTA-204ENST00000558376 ABCA8O94911 1581 aa19.04■□□□□ 0.64
RABGGTA-204ENST00000558376 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
RABGGTA-204ENST00000558376 GOLGA3Q08378 1498 aa19.02■□□□□ 0.64
RABGGTA-204ENST00000558376 CD109Q6YHK3 1445 aa19.02■□□□□ 0.64
RABGGTA-204ENST00000558376 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
RABGGTA-204ENST00000558376 CFAP43Q8NDM7 1665 aa18.99■□□□□ 0.63
RABGGTA-204ENST00000558376 PRXQ9BXM0 1461 aa18.99■□□□□ 0.63
RABGGTA-204ENST00000558376 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
RABGGTA-204ENST00000558376 ARID3CA6NKF2 412 aa18.92■□□□□ 0.62
RABGGTA-204ENST00000558376 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
RABGGTA-204ENST00000558376 ATP10BO94823 1461 aa18.9■□□□□ 0.62
RABGGTA-204ENST00000558376 KIF21BO75037 1637 aa18.88■□□□□ 0.61
RABGGTA-204ENST00000558376 ARAP3Q8WWN8 1544 aa18.86■□□□□ 0.61
RABGGTA-204ENST00000558376 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
RABGGTA-204ENST00000558376 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
RABGGTA-204ENST00000558376 SAMD9Q5K651 1589 aa18.8■□□□□ 0.6
RABGGTA-204ENST00000558376 CSRNP3Q8WYN3 585 aa18.8■□□□□ 0.6
RABGGTA-204ENST00000558376 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
RABGGTA-204ENST00000558376 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
RABGGTA-204ENST00000558376 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
RABGGTA-204ENST00000558376 ADAMTSL3P82987 1691 aa18.75■□□□□ 0.59
RABGGTA-204ENST00000558376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.73■□□□□ 0.59
RABGGTA-204ENST00000558376 HNRNPUL2Q1KMD3 747 aaKnown RBP18.73■□□□□ 0.59
RABGGTA-204ENST00000558376 NEO1Q92859 1461 aa18.73■□□□□ 0.59
RABGGTA-204ENST00000558376 PTPRMP28827 1452 aa18.72■□□□□ 0.59
RABGGTA-204ENST00000558376 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
RABGGTA-204ENST00000558376 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
RABGGTA-204ENST00000558376 FRMPD1Q5SYB0 1578 aa18.71■□□□□ 0.59
RABGGTA-204ENST00000558376 FHOD3Q2V2M9 1422 aa18.68■□□□□ 0.58
RABGGTA-204ENST00000558376 BCORL1Q5H9F3 1711 aa18.67■□□□□ 0.58
RABGGTA-204ENST00000558376 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
RABGGTA-204ENST00000558376 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
RABGGTA-204ENST00000558376 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
RABGGTA-204ENST00000558376 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
RABGGTA-204ENST00000558376 FBXO41Q8TF61 875 aa18.61■□□□□ 0.57
RABGGTA-204ENST00000558376 DENND4BO75064 1496 aaPredicted RBP18.61■□□□□ 0.57
RABGGTA-204ENST00000558376 EEA1Q15075 1411 aa18.61■□□□□ 0.57
RABGGTA-204ENST00000558376 AKNAQ7Z591 1439 aa18.61■□□□□ 0.57
RABGGTA-204ENST00000558376 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.59■□□□□ 0.57
RABGGTA-204ENST00000558376 ARHGEF40Q8TER5 1519 aa18.59■□□□□ 0.57
RABGGTA-204ENST00000558376 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
RABGGTA-204ENST00000558376 FANCAO15360 1455 aa18.57■□□□□ 0.56
RABGGTA-204ENST00000558376 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-204ENST00000558376 PCF11O94913 1555 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-204ENST00000558376 LMTK3Q96Q04 1460 aa18.56■□□□□ 0.56
RABGGTA-204ENST00000558376 TTC37Q6PGP7 1564 aa18.56■□□□□ 0.56
RABGGTA-204ENST00000558376 SIGLEC1Q9BZZ2 1709 aa18.55■□□□□ 0.56
RABGGTA-204ENST00000558376 CFAP74Q9C0B2 1584 aa18.54■□□□□ 0.56
RABGGTA-204ENST00000558376 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
RABGGTA-204ENST00000558376 YEATS2Q9ULM3 1422 aa18.53■□□□□ 0.56
RABGGTA-204ENST00000558376 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-204ENST00000558376 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.55
RABGGTA-204ENST00000558376 PLPPR3Q6T4P5 718 aa18.51■□□□□ 0.55
RABGGTA-204ENST00000558376 HSPA2P54652 639 aa18.5■□□□□ 0.55
RABGGTA-204ENST00000558376 ZFYVE16Q7Z3T8 1539 aa18.5■□□□□ 0.55
RABGGTA-204ENST00000558376 HECW1Q76N89 1606 aa18.48■□□□□ 0.55
RABGGTA-204ENST00000558376 POGZQ7Z3K3 1410 aa18.48■□□□□ 0.55
RABGGTA-204ENST00000558376 PLCH2O75038 1416 aa18.47■□□□□ 0.55
RABGGTA-204ENST00000558376 SCAPERQ9BY12 1400 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms