RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
RORA-207ENST00000558234 DISP1Q96F81 1524 aa19.11■□□□□ 0.65
RORA-207ENST00000558234 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
RORA-207ENST00000558234 KIAA0556O60303 1618 aa19.1■□□□□ 0.65
RORA-207ENST00000558234 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
RORA-207ENST00000558234 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
RORA-207ENST00000558234 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
RORA-207ENST00000558234 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
RORA-207ENST00000558234 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
RORA-207ENST00000558234 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
RORA-207ENST00000558234 OSCARQ8IYS5 282 aa19■□□□□ 0.63
RORA-207ENST00000558234 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
RORA-207ENST00000558234 ARHGAP35Q9NRY4 1499 aa18.94■□□□□ 0.62
RORA-207ENST00000558234 LRRIQ1Q96JM4 1722 aa18.93■□□□□ 0.62
RORA-207ENST00000558234 ARAP1Q96P48 1450 aa18.93■□□□□ 0.62
RORA-207ENST00000558234 ABCA8O94911 1581 aa18.9■□□□□ 0.62
RORA-207ENST00000558234 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
RORA-207ENST00000558234 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
RORA-207ENST00000558234 ADCY10Q96PN6 1610 aa18.88■□□□□ 0.61
RORA-207ENST00000558234 FBLN2P98095 1184 aa18.87■□□□□ 0.61
RORA-207ENST00000558234 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
RORA-207ENST00000558234 JPH4Q96JJ6 628 aa18.84■□□□□ 0.61
RORA-207ENST00000558234 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
RORA-207ENST00000558234 LOC105371045A0A1W2PR82 267 aa18.82■□□□□ 0.6
RORA-207ENST00000558234 CEP162Q5TB80 1403 aa18.8■□□□□ 0.6
RORA-207ENST00000558234 RAPGEF6Q8TEU7 1601 aa18.8■□□□□ 0.6
RORA-207ENST00000558234 CARMIL2Q6F5E8 1435 aa18.77■□□□□ 0.6
RORA-207ENST00000558234 ABCC2Q92887 1545 aa18.77■□□□□ 0.6
RORA-207ENST00000558234 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
RORA-207ENST00000558234 CLIP1P30622 1438 aa18.73■□□□□ 0.59
RORA-207ENST00000558234 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
RORA-207ENST00000558234 FHOD3Q2V2M9 1422 aa18.72■□□□□ 0.59
RORA-207ENST00000558234 CFAP43Q8NDM7 1665 aa18.72■□□□□ 0.59
RORA-207ENST00000558234 KDM5BQ9UGL1 1544 aa18.71■□□□□ 0.59
RORA-207ENST00000558234 NUP153P49790 1475 aaKnown RBP18.69■□□□□ 0.58
RORA-207ENST00000558234 HECW1Q76N89 1606 aa18.69■□□□□ 0.58
RORA-207ENST00000558234 PLB1Q6P1J6 1458 aa18.68■□□□□ 0.58
RORA-207ENST00000558234 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
RORA-207ENST00000558234 MAPKBP1O60336 1514 aa18.67■□□□□ 0.58
RORA-207ENST00000558234 UACAQ9BZF9 1416 aa18.66■□□□□ 0.58
RORA-207ENST00000558234 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
RORA-207ENST00000558234 PTPRGP23470 1445 aa18.64■□□□□ 0.57
RORA-207ENST00000558234 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
RORA-207ENST00000558234 MAP3K1Q13233 1512 aa18.62■□□□□ 0.57
RORA-207ENST00000558234 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
RORA-207ENST00000558234 KIF13AQ9H1H9 1805 aa18.6■□□□□ 0.57
RORA-207ENST00000558234 VPS8Q8N3P4 1428 aa18.6■□□□□ 0.57
RORA-207ENST00000558234 MAGI3Q5TCQ9 1506 aa18.57■□□□□ 0.56
RORA-207ENST00000558234 ATP10BO94823 1461 aa18.57■□□□□ 0.56
RORA-207ENST00000558234 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
RORA-207ENST00000558234 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
RORA-207ENST00000558234 GLI2P10070 1586 aa18.53■□□□□ 0.56
RORA-207ENST00000558234 CCDC18Q5T9S5 1454 aa18.53■□□□□ 0.56
RORA-207ENST00000558234 DIP2BQ9P265 1576 aa18.52■□□□□ 0.55
RORA-207ENST00000558234 PPRC1Q5VV67 1664 aaKnown RBP18.51■□□□□ 0.55
RORA-207ENST00000558234 CDK13Q14004 1512 aaKnown RBP18.51■□□□□ 0.55
RORA-207ENST00000558234 MAP3K4Q9Y6R4 1608 aa18.51■□□□□ 0.55
RORA-207ENST00000558234 ABCA9Q8IUA7 1624 aa18.48■□□□□ 0.55
RORA-207ENST00000558234 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
RORA-207ENST00000558234 KIF14Q15058 1648 aa18.44■□□□□ 0.54
RORA-207ENST00000558234 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
RORA-207ENST00000558234 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
RORA-207ENST00000558234 EHBP1L1Q8N3D4 1523 aa18.41■□□□□ 0.54
RORA-207ENST00000558234 TTC37Q6PGP7 1564 aa18.4■□□□□ 0.54
RORA-207ENST00000558234 CDC42BPAQ5VT25 1732 aa18.4■□□□□ 0.54
RORA-207ENST00000558234 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
RORA-207ENST00000558234 ABCC10Q5T3U5 1492 aa18.4■□□□□ 0.54
RORA-207ENST00000558234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.38■□□□□ 0.53
RORA-207ENST00000558234 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
RORA-207ENST00000558234 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
RORA-207ENST00000558234 PREX2Q70Z35 1606 aa18.36■□□□□ 0.53
RORA-207ENST00000558234 ARAP3Q8WWN8 1544 aa18.36■□□□□ 0.53
RORA-207ENST00000558234 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
RORA-207ENST00000558234 MYO5CQ9NQX4 1742 aa18.35■□□□□ 0.53
RORA-207ENST00000558234 SUPT6HQ7KZ85 1726 aaKnown RBP18.34■□□□□ 0.53
RORA-207ENST00000558234 TROQ12816 1431 aaPredicted RBP18.34■□□□□ 0.53
RORA-207ENST00000558234 RANGAP1P46060 587 aaPredicted RBP18.3■□□□□ 0.52
RORA-207ENST00000558234 ITSN2Q9NZM3 1697 aa18.29■□□□□ 0.52
RORA-207ENST00000558234 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
RORA-207ENST00000558234 NCOA2Q15596 1464 aa18.2■□□□□ 0.5
RORA-207ENST00000558234 FRMPD1Q5SYB0 1578 aa18.19■□□□□ 0.5
RORA-207ENST00000558234 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
RORA-207ENST00000558234 GPATCH8Q9UKJ3 1502 aaKnown RBP18.19■□□□□ 0.5
RORA-207ENST00000558234 RICTORQ6R327 1708 aa18.19■□□□□ 0.5
RORA-207ENST00000558234 CROCC2H7BZ55 1655 aa18.17■□□□□ 0.5
RORA-207ENST00000558234 KANK4Q5T7N3 995 aaPredicted RBP18.16■□□□□ 0.5
RORA-207ENST00000558234 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
RORA-207ENST00000558234 PLCH2O75038 1416 aa18.15■□□□□ 0.5
RORA-207ENST00000558234 TSPOAP1O95153 1857 aa18.15■□□□□ 0.5
RORA-207ENST00000558234 ABCC1P33527 1531 aa18.15■□□□□ 0.5
RORA-207ENST00000558234 TTBK1Q5TCY1 1321 aaPredicted RBP18.13■□□□□ 0.49
RORA-207ENST00000558234 NEO1Q92859 1461 aa18.12■□□□□ 0.49
RORA-207ENST00000558234 KDM5CP41229 1560 aa18.11■□□□□ 0.49
RORA-207ENST00000558234 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
RORA-207ENST00000558234 PTPN23Q9H3S7 1636 aa18.09■□□□□ 0.49
RORA-207ENST00000558234 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
RORA-207ENST00000558234 PHLDB1Q86UU1 1377 aa18.09■□□□□ 0.49
RORA-207ENST00000558234 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.48
RORA-207ENST00000558234 MYOM3Q5VTT5 1437 aa18.07■□□□□ 0.48
RORA-207ENST00000558234 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms