RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
RORA-207ENST00000558234 CCDC180Q9P1Z9 1646 aa25.03■■□□□ 1.6
RORA-207ENST00000558234 ABCC9O60706 1549 aa23.58■■□□□ 1.37
RORA-207ENST00000558234 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
RORA-207ENST00000558234 DCAF1Q9Y4B6 1507 aa23.44■■□□□ 1.34
RORA-207ENST00000558234 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
RORA-207ENST00000558234 NACADO15069 1562 aa23.25■■□□□ 1.31
RORA-207ENST00000558234 RB1CC1Q8TDY2 1594 aa23.11■■□□□ 1.29
RORA-207ENST00000558234 UNC13AQ9UPW8 1703 aa22.95■■□□□ 1.27
RORA-207ENST00000558234 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
RORA-207ENST00000558234 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
RORA-207ENST00000558234 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
RORA-207ENST00000558234 DCAF8L2P0C7V8 631 aa22.38■■□□□ 1.17
RORA-207ENST00000558234 PABPN1Q86U42 306 aaKnown RBP eCLIP21.9■■□□□ 1.1
RORA-207ENST00000558234 EIF4G1Q04637 1599 aaKnown RBP21.82■■□□□ 1.08
RORA-207ENST00000558234 SMARCA4P51532 1647 aa21.76■■□□□ 1.07
RORA-207ENST00000558234 PEG3Q9GZU2 1588 aa21.72■■□□□ 1.07
RORA-207ENST00000558234 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
RORA-207ENST00000558234 BAZ1AQ9NRL2 1556 aaPredicted RBP21.68■■□□□ 1.06
RORA-207ENST00000558234 CC2D2AQ9P2K1 1620 aa21.62■■□□□ 1.05
RORA-207ENST00000558234 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
RORA-207ENST00000558234 HMGXB3Q12766 1538 aa21.44■■□□□ 1.02
RORA-207ENST00000558234 WIZO95785 1651 aa21.43■■□□□ 1.02
RORA-207ENST00000558234 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
RORA-207ENST00000558234 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
RORA-207ENST00000558234 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
RORA-207ENST00000558234 NCAPD3P42695 1498 aa21.4■■□□□ 1.02
RORA-207ENST00000558234 DNAJC5BQ9UF47 199 aa21.36■■□□□ 1.01
RORA-207ENST00000558234 TOP2AP11388 1531 aaKnown RBP21.24■□□□□ 0.99
RORA-207ENST00000558234 BAZ1BQ9UIG0 1483 aaKnown RBP21.14■□□□□ 0.97
RORA-207ENST00000558234 PRDM2Q13029 1718 aa20.97■□□□□ 0.95
RORA-207ENST00000558234 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
RORA-207ENST00000558234 LAMC3Q9Y6N6 1575 aa20.82■□□□□ 0.92
RORA-207ENST00000558234 CFTRP13569 1480 aa20.75■□□□□ 0.91
RORA-207ENST00000558234 KIF21AQ7Z4S6 1674 aa20.65■□□□□ 0.9
RORA-207ENST00000558234 NESP48681 1621 aa20.65■□□□□ 0.9
RORA-207ENST00000558234 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
RORA-207ENST00000558234 THOC2Q8NI27 1593 aaKnown RBP20.56■□□□□ 0.88
RORA-207ENST00000558234 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
RORA-207ENST00000558234 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
RORA-207ENST00000558234 WDR62O43379 1518 aa20.41■□□□□ 0.86
RORA-207ENST00000558234 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
RORA-207ENST00000558234 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
RORA-207ENST00000558234 CEP164Q9UPV0 1460 aa20.33■□□□□ 0.85
RORA-207ENST00000558234 URB2Q14146 1524 aaKnown RBP20.32■□□□□ 0.84
RORA-207ENST00000558234 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
RORA-207ENST00000558234 DNMBPQ6XZF7 1577 aa20.3■□□□□ 0.84
RORA-207ENST00000558234 CUX1P39880 1505 aa20.27■□□□□ 0.84
RORA-207ENST00000558234 TOP2BQ02880 1626 aa20.25■□□□□ 0.83
RORA-207ENST00000558234 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
RORA-207ENST00000558234 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
RORA-207ENST00000558234 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
RORA-207ENST00000558234 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
RORA-207ENST00000558234 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
RORA-207ENST00000558234 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
RORA-207ENST00000558234 CUX2O14529 1486 aa20.17■□□□□ 0.82
RORA-207ENST00000558234 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
RORA-207ENST00000558234 POLA1P09884 1462 aaPredicted RBP20.05■□□□□ 0.8
RORA-207ENST00000558234 FGD5Q6ZNL6 1462 aa20.02■□□□□ 0.79
RORA-207ENST00000558234 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
RORA-207ENST00000558234 ABCA10Q8WWZ4 1543 aa19.95■□□□□ 0.78
RORA-207ENST00000558234 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
RORA-207ENST00000558234 EIF4G3O43432 1585 aaKnown RBP19.91■□□□□ 0.78
RORA-207ENST00000558234 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
RORA-207ENST00000558234 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
RORA-207ENST00000558234 ZNF608Q9ULD9 1512 aaPredicted RBP19.82■□□□□ 0.76
RORA-207ENST00000558234 SOGA1O94964 1423 aa19.79■□□□□ 0.76
RORA-207ENST00000558234 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
RORA-207ENST00000558234 CHIC1Q5VXU3 224 aa19.73■□□□□ 0.75
RORA-207ENST00000558234 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
RORA-207ENST00000558234 CUL7Q14999 1698 aa19.68■□□□□ 0.74
RORA-207ENST00000558234 GAPVD1Q14C86 1478 aa19.65■□□□□ 0.74
RORA-207ENST00000558234 AQRO60306 1485 aaKnown RBP eCLIP19.64■□□□□ 0.73
RORA-207ENST00000558234 CHD1O14646 1710 aa19.63■□□□□ 0.73
RORA-207ENST00000558234 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
RORA-207ENST00000558234 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
RORA-207ENST00000558234 MAGI1Q96QZ7 1491 aaPredicted RBP19.62■□□□□ 0.73
RORA-207ENST00000558234 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
RORA-207ENST00000558234 KIF27Q86VH2 1401 aa19.56■□□□□ 0.72
RORA-207ENST00000558234 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
RORA-207ENST00000558234 EEA1Q15075 1411 aa19.53■□□□□ 0.72
RORA-207ENST00000558234 IGF1RP08069 1367 aa19.53■□□□□ 0.72
RORA-207ENST00000558234 KIF21BO75037 1637 aa19.52■□□□□ 0.72
RORA-207ENST00000558234 PRXQ9BXM0 1461 aa19.52■□□□□ 0.71
RORA-207ENST00000558234 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
RORA-207ENST00000558234 CLASP1Q7Z460 1538 aa19.48■□□□□ 0.71
RORA-207ENST00000558234 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
RORA-207ENST00000558234 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
RORA-207ENST00000558234 CEP170Q5SW79 1584 aa19.45■□□□□ 0.7
RORA-207ENST00000558234 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
RORA-207ENST00000558234 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
RORA-207ENST00000558234 CTTNBP2Q8WZ74 1663 aa19.43■□□□□ 0.7
RORA-207ENST00000558234 NUP160Q12769 1436 aa19.42■□□□□ 0.7
RORA-207ENST00000558234 RAPGEF2Q9Y4G8 1499 aa19.33■□□□□ 0.69
RORA-207ENST00000558234 CARMIL1Q5VZK9 1371 aa19.3■□□□□ 0.68
RORA-207ENST00000558234 SAMD9Q5K651 1589 aa19.22■□□□□ 0.67
RORA-207ENST00000558234 IQGAP2Q13576 1575 aa19.21■□□□□ 0.67
RORA-207ENST00000558234 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
RORA-207ENST00000558234 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
RORA-207ENST00000558234 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms