RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
RPL28-205ENST00000558131 KIF27Q86VH2 1401 aa28.82■■■□□ 2.2
RPL28-205ENST00000558131 JPH4Q96JJ6 628 aa28.78■■■□□ 2.2
RPL28-205ENST00000558131 KIAA0586Q9BVV6 1533 aa28.75■■■□□ 2.19
RPL28-205ENST00000558131 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
RPL28-205ENST00000558131 MAPKBP1O60336 1514 aa28.63■■■□□ 2.17
RPL28-205ENST00000558131 CARMIL1Q5VZK9 1371 aa28.6■■■□□ 2.17
RPL28-205ENST00000558131 DIP2BQ9P265 1576 aa28.58■■■□□ 2.17
RPL28-205ENST00000558131 IQGAP2Q13576 1575 aa28.55■■■□□ 2.16
RPL28-205ENST00000558131 ABCC10Q5T3U5 1492 aa28.53■■■□□ 2.16
RPL28-205ENST00000558131 DISP1Q96F81 1524 aa28.43■■■□□ 2.14
RPL28-205ENST00000558131 RAPGEF2Q9Y4G8 1499 aa28.4■■■□□ 2.14
RPL28-205ENST00000558131 PTPRGP23470 1445 aa28.38■■■□□ 2.13
RPL28-205ENST00000558131 UGGT2Q9NYU1 1516 aa28.38■■■□□ 2.13
RPL28-205ENST00000558131 TNIKQ9UKE5 1360 aa28.37■■■□□ 2.13
RPL28-205ENST00000558131 CARMIL2Q6F5E8 1435 aa28.36■■■□□ 2.13
RPL28-205ENST00000558131 CTTNBP2Q8WZ74 1663 aa28.36■■■□□ 2.13
RPL28-205ENST00000558131 ABCC2Q92887 1545 aa28.34■■■□□ 2.13
RPL28-205ENST00000558131 KIAA0556O60303 1618 aa28.34■■■□□ 2.13
RPL28-205ENST00000558131 NPM1P06748 294 aaKnown RBP eCLIP28.33■■■□□ 2.13
RPL28-205ENST00000558131 FAM69CQ0P6D2 419 aa28.33■■■□□ 2.13
RPL28-205ENST00000558131 TSPOAP1O95153 1857 aa28.32■■■□□ 2.12
RPL28-205ENST00000558131 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
RPL28-205ENST00000558131 PPRC1Q5VV67 1664 aaKnown RBP28.27■■■□□ 2.12
RPL28-205ENST00000558131 KDM6BO15054 1643 aa28.24■■■□□ 2.11
RPL28-205ENST00000558131 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
RPL28-205ENST00000558131 GLI2P10070 1586 aa28.22■■■□□ 2.11
RPL28-205ENST00000558131 ZCCHC11Q5TAX3 1644 aaKnown RBP28.21■■■□□ 2.11
RPL28-205ENST00000558131 ASXL2Q76L83 1435 aa28.2■■■□□ 2.11
RPL28-205ENST00000558131 KDM5BQ9UGL1 1544 aa28.2■■■□□ 2.1
RPL28-205ENST00000558131 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
RPL28-205ENST00000558131 PRXQ9BXM0 1461 aa28.19■■■□□ 2.1
RPL28-205ENST00000558131 PLB1Q6P1J6 1458 aa28.16■■■□□ 2.1
RPL28-205ENST00000558131 MAP3K4Q9Y6R4 1608 aa28.13■■■□□ 2.09
RPL28-205ENST00000558131 AEBP2Q6ZN18 517 aaPredicted RBP28.12■■■□□ 2.09
RPL28-205ENST00000558131 EPRSP07814 1512 aaKnown RBP28.08■■■□□ 2.09
RPL28-205ENST00000558131 ABCA8O94911 1581 aa28.07■■■□□ 2.08
RPL28-205ENST00000558131 GOLGA3Q08378 1498 aa28.02■■■□□ 2.08
RPL28-205ENST00000558131 WDR7Q9Y4E6 1490 aa27.96■■■□□ 2.07
RPL28-205ENST00000558131 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
RPL28-205ENST00000558131 SAMD9Q5K651 1589 aa27.94■■■□□ 2.06
RPL28-205ENST00000558131 CFAP43Q8NDM7 1665 aa27.9■■■□□ 2.06
RPL28-205ENST00000558131 TEX14Q8IWB6 1497 aa27.86■■■□□ 2.05
RPL28-205ENST00000558131 KDM4FA0A1W2PPD8 638 aa27.84■■■□□ 2.05
RPL28-205ENST00000558131 MAGI3Q5TCQ9 1506 aa27.78■■■□□ 2.04
RPL28-205ENST00000558131 CSRNP3Q8WYN3 585 aa27.78■■■□□ 2.04
RPL28-205ENST00000558131 EEA1Q15075 1411 aa27.77■■■□□ 2.04
RPL28-205ENST00000558131 RAPGEF6Q8TEU7 1601 aa27.76■■■□□ 2.03
RPL28-205ENST00000558131 ATP10BO94823 1461 aa27.74■■■□□ 2.03
RPL28-205ENST00000558131 KIF21BO75037 1637 aa27.71■■■□□ 2.03
RPL28-205ENST00000558131 CD109Q6YHK3 1445 aa27.71■■■□□ 2.03
RPL28-205ENST00000558131 ABCA9Q8IUA7 1624 aa27.7■■■□□ 2.02
RPL28-205ENST00000558131 ADGRL1O94910 1474 aa27.7■■■□□ 2.02
RPL28-205ENST00000558131 P3H3Q8IVL6 736 aa27.68■■■□□ 2.02
RPL28-205ENST00000558131 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.01
RPL28-205ENST00000558131 KCNH8Q96L42 1107 aa27.62■■■□□ 2.01
RPL28-205ENST00000558131 FHOD3Q2V2M9 1422 aa27.6■■■□□ 2.01
RPL28-205ENST00000558131 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
RPL28-205ENST00000558131 EFCAB5A4FU69 1503 aa27.57■■■□□ 2
RPL28-205ENST00000558131 ARAP3Q8WWN8 1544 aa27.57■■■□□ 2
RPL28-205ENST00000558131 FAM9AQ8IZU1 332 aaPredicted RBP27.5■■□□□ 1.99
RPL28-205ENST00000558131 FRMPD1Q5SYB0 1578 aa27.5■■□□□ 1.99
RPL28-205ENST00000558131 NEO1Q92859 1461 aa27.44■■□□□ 1.98
RPL28-205ENST00000558131 RANGAP1P46060 587 aaPredicted RBP27.42■■□□□ 1.98
RPL28-205ENST00000558131 TTC37Q6PGP7 1564 aa27.4■■□□□ 1.98
RPL28-205ENST00000558131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.39■■□□□ 1.98
RPL28-205ENST00000558131 PHLDB1Q86UU1 1377 aa27.38■■□□□ 1.97
RPL28-205ENST00000558131 RICTORQ6R327 1708 aa27.38■■□□□ 1.97
RPL28-205ENST00000558131 CDK13Q14004 1512 aaKnown RBP27.37■■□□□ 1.97
RPL28-205ENST00000558131 HECW2Q9P2P5 1572 aa27.36■■□□□ 1.97
RPL28-205ENST00000558131 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
RPL28-205ENST00000558131 ARHGAP35Q9NRY4 1499 aa27.33■■□□□ 1.97
RPL28-205ENST00000558131 CFAP74Q9C0B2 1584 aa27.32■■□□□ 1.96
RPL28-205ENST00000558131 ADAMTSL3P82987 1691 aa27.32■■□□□ 1.96
RPL28-205ENST00000558131 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
RPL28-205ENST00000558131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
RPL28-205ENST00000558131 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
RPL28-205ENST00000558131 HECW1Q76N89 1606 aa27.3■■□□□ 1.96
RPL28-205ENST00000558131 ARHGEF40Q8TER5 1519 aa27.29■■□□□ 1.96
RPL28-205ENST00000558131 RAPGEF3O95398 923 aa27.27■■□□□ 1.96
RPL28-205ENST00000558131 BCORL1Q5H9F3 1711 aa27.27■■□□□ 1.96
RPL28-205ENST00000558131 FANCAO15360 1455 aa27.25■■□□□ 1.95
RPL28-205ENST00000558131 SIGLEC1Q9BZZ2 1709 aa27.24■■□□□ 1.95
RPL28-205ENST00000558131 ZMYM4Q5VZL5 1548 aa27.22■■□□□ 1.95
RPL28-205ENST00000558131 PLEKHD1A6NEE1 506 aa27.22■■□□□ 1.95
RPL28-205ENST00000558131 FMN1Q68DA7 1419 aa27.22■■□□□ 1.95
RPL28-205ENST00000558131 AKNAQ7Z591 1439 aa27.21■■□□□ 1.95
RPL28-205ENST00000558131 KIF14Q15058 1648 aa27.19■■□□□ 1.94
RPL28-205ENST00000558131 MYO5CQ9NQX4 1742 aa27.19■■□□□ 1.94
RPL28-205ENST00000558131 EHMT2Q96KQ7 1210 aa27.19■■□□□ 1.94
RPL28-205ENST00000558131 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
RPL28-205ENST00000558131 DENND4BO75064 1496 aaPredicted RBP27.19■■□□□ 1.94
RPL28-205ENST00000558131 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
RPL28-205ENST00000558131 PTPRMP28827 1452 aa27.14■■□□□ 1.94
RPL28-205ENST00000558131 PLCH2O75038 1416 aa27.12■■□□□ 1.93
RPL28-205ENST00000558131 PCF11O94913 1555 aaKnown RBP27.11■■□□□ 1.93
RPL28-205ENST00000558131 ZFYVE16Q7Z3T8 1539 aa27.09■■□□□ 1.93
RPL28-205ENST00000558131 RIMS1Q86UR5 1692 aaKnown RBP27.08■■□□□ 1.92
RPL28-205ENST00000558131 POGZQ7Z3K3 1410 aa27.07■■□□□ 1.92
RPL28-205ENST00000558131 YEATS2Q9ULM3 1422 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms