RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
CRNDE-203ENST00000557792 CUL7Q14999 1698 aa37.3■■■■□ 3.56
CRNDE-203ENST00000557792 KIAA0586Q9BVV6 1533 aa37.25■■■■□ 3.55
CRNDE-203ENST00000557792 KIF13AQ9H1H9 1805 aa37.24■■■■□ 3.55
CRNDE-203ENST00000557792 ADCY10Q96PN6 1610 aa37.11■■■■□ 3.53
CRNDE-203ENST00000557792 CARMIL1Q5VZK9 1371 aa37.1■■■■□ 3.53
CRNDE-203ENST00000557792 NPM1P06748 294 aaKnown RBP eCLIP37.09■■■■□ 3.53
CRNDE-203ENST00000557792 MAPKBP1O60336 1514 aa37.05■■■■□ 3.52
CRNDE-203ENST00000557792 ABCC10Q5T3U5 1492 aa37.03■■■■□ 3.52
CRNDE-203ENST00000557792 AEBP2Q6ZN18 517 aaPredicted RBP37.03■■■■□ 3.52
CRNDE-203ENST00000557792 FAM69CQ0P6D2 419 aa37■■■■□ 3.51
CRNDE-203ENST00000557792 DIP2BQ9P265 1576 aa36.95■■■■□ 3.51
CRNDE-203ENST00000557792 PTPRGP23470 1445 aa36.92■■■■□ 3.5
CRNDE-203ENST00000557792 IQGAP2Q13576 1575 aa36.89■■■■□ 3.5
CRNDE-203ENST00000557792 CARMIL2Q6F5E8 1435 aa36.87■■■■□ 3.49
CRNDE-203ENST00000557792 TNIKQ9UKE5 1360 aa36.84■■■■□ 3.49
CRNDE-203ENST00000557792 TTBK1Q5TCY1 1321 aaPredicted RBP36.84■■■■□ 3.49
CRNDE-203ENST00000557792 RAPGEF2Q9Y4G8 1499 aa36.76■■■■□ 3.48
CRNDE-203ENST00000557792 ABCC2Q92887 1545 aa36.74■■■■□ 3.47
CRNDE-203ENST00000557792 DISP1Q96F81 1524 aa36.73■■■■□ 3.47
CRNDE-203ENST00000557792 TSPOAP1O95153 1857 aa36.73■■■■□ 3.47
CRNDE-203ENST00000557792 UGGT2Q9NYU1 1516 aa36.66■■■■□ 3.46
CRNDE-203ENST00000557792 UHRF1BP1LA0JNW5 1464 aa36.66■■■■□ 3.46
CRNDE-203ENST00000557792 KDM6BO15054 1643 aa36.64■■■■□ 3.46
CRNDE-203ENST00000557792 UACAQ9BZF9 1416 aa36.63■■■■□ 3.45
CRNDE-203ENST00000557792 ASXL2Q76L83 1435 aa36.61■■■■□ 3.45
CRNDE-203ENST00000557792 PLB1Q6P1J6 1458 aa36.58■■■■□ 3.45
CRNDE-203ENST00000557792 KIAA0556O60303 1618 aa36.56■■■■□ 3.44
CRNDE-203ENST00000557792 PRXQ9BXM0 1461 aa36.55■■■■□ 3.44
CRNDE-203ENST00000557792 CSRNP3Q8WYN3 585 aa36.53■■■■□ 3.44
CRNDE-203ENST00000557792 GLI2P10070 1586 aa36.53■■■■□ 3.44
CRNDE-203ENST00000557792 CHIC1Q5VXU3 224 aa36.5■■■■□ 3.43
CRNDE-203ENST00000557792 CTTNBP2Q8WZ74 1663 aa36.5■■■■□ 3.43
CRNDE-203ENST00000557792 KDM5BQ9UGL1 1544 aa36.49■■■■□ 3.43
CRNDE-203ENST00000557792 PPRC1Q5VV67 1664 aaKnown RBP36.47■■■■□ 3.43
CRNDE-203ENST00000557792 ZCCHC11Q5TAX3 1644 aaKnown RBP36.44■■■■□ 3.42
CRNDE-203ENST00000557792 EPRSP07814 1512 aaKnown RBP36.39■■■■□ 3.42
CRNDE-203ENST00000557792 EEA1Q15075 1411 aa36.38■■■■□ 3.41
CRNDE-203ENST00000557792 FAM9AQ8IZU1 332 aaPredicted RBP36.38■■■■□ 3.41
CRNDE-203ENST00000557792 GOLGA3Q08378 1498 aa36.34■■■■□ 3.41
CRNDE-203ENST00000557792 MAP3K4Q9Y6R4 1608 aa36.34■■■■□ 3.41
CRNDE-203ENST00000557792 KDM4FA0A1W2PPD8 638 aa36.3■■■■□ 3.4
CRNDE-203ENST00000557792 WDR7Q9Y4E6 1490 aa36.24■■■■□ 3.39
CRNDE-203ENST00000557792 ABCA8O94911 1581 aa36.24■■■■□ 3.39
CRNDE-203ENST00000557792 TEX14Q8IWB6 1497 aa36.21■■■■□ 3.39
CRNDE-203ENST00000557792 COL17A1Q9UMD9 1497 aaPredicted RBP36.21■■■■□ 3.39
CRNDE-203ENST00000557792 CFAP43Q8NDM7 1665 aa36.05■■■■□ 3.36
CRNDE-203ENST00000557792 KCNH8Q96L42 1107 aa36.05■■■■□ 3.36
CRNDE-203ENST00000557792 CD109Q6YHK3 1445 aa36.03■■■■□ 3.36
CRNDE-203ENST00000557792 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
CRNDE-203ENST00000557792 MAGI3Q5TCQ9 1506 aa36.01■■■■□ 3.36
CRNDE-203ENST00000557792 ADGRL1O94910 1474 aa36■■■■□ 3.35
CRNDE-203ENST00000557792 SAMD9Q5K651 1589 aa35.97■■■■□ 3.35
CRNDE-203ENST00000557792 KIF21BO75037 1637 aa35.97■■■■□ 3.35
CRNDE-203ENST00000557792 RANGAP1P46060 587 aaPredicted RBP35.95■■■■□ 3.35
CRNDE-203ENST00000557792 EHMT2Q96KQ7 1210 aa35.95■■■■□ 3.35
CRNDE-203ENST00000557792 ATP10BO94823 1461 aa35.94■■■■□ 3.34
CRNDE-203ENST00000557792 ARID3CA6NKF2 412 aa35.94■■■■□ 3.34
CRNDE-203ENST00000557792 UBTFP17480 764 aaKnown RBP35.86■■■■□ 3.33
CRNDE-203ENST00000557792 RAPGEF6Q8TEU7 1601 aa35.84■■■■□ 3.33
CRNDE-203ENST00000557792 ABCA9Q8IUA7 1624 aa35.77■■■■□ 3.32
CRNDE-203ENST00000557792 ARAP3Q8WWN8 1544 aa35.73■■■■□ 3.31
CRNDE-203ENST00000557792 FHOD3Q2V2M9 1422 aa35.72■■■■□ 3.31
CRNDE-203ENST00000557792 NUP153P49790 1475 aaKnown RBP35.71■■■■□ 3.31
CRNDE-203ENST00000557792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.69■■■■□ 3.3
CRNDE-203ENST00000557792 HNRNPUL2Q1KMD3 747 aaKnown RBP35.69■■■■□ 3.3
CRNDE-203ENST00000557792 PHLDB1Q86UU1 1377 aa35.64■■■■□ 3.3
CRNDE-203ENST00000557792 EFCAB5A4FU69 1503 aa35.62■■■■□ 3.29
CRNDE-203ENST00000557792 NEO1Q92859 1461 aa35.57■■■■□ 3.28
CRNDE-203ENST00000557792 HECW2Q9P2P5 1572 aa35.53■■■■□ 3.28
CRNDE-203ENST00000557792 RAPGEF3O95398 923 aa35.52■■■■□ 3.28
CRNDE-203ENST00000557792 ARHGAP35Q9NRY4 1499 aa35.49■■■■□ 3.27
CRNDE-203ENST00000557792 PLEKHD1A6NEE1 506 aa35.49■■■■□ 3.27
CRNDE-203ENST00000557792 FRMPD1Q5SYB0 1578 aa35.45■■■■□ 3.27
CRNDE-203ENST00000557792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.4■■■■□ 3.26
CRNDE-203ENST00000557792 FMN1Q68DA7 1419 aa35.37■■■■□ 3.25
CRNDE-203ENST00000557792 CDK13Q14004 1512 aaKnown RBP35.36■■■■□ 3.25
CRNDE-203ENST00000557792 ADAMTSL3P82987 1691 aa35.35■■■■□ 3.25
CRNDE-203ENST00000557792 TTC37Q6PGP7 1564 aa35.34■■■■□ 3.25
CRNDE-203ENST00000557792 FANCAO15360 1455 aa35.34■■■■□ 3.25
CRNDE-203ENST00000557792 AKNAQ7Z591 1439 aa35.33■■■■□ 3.25
CRNDE-203ENST00000557792 ATP1B4Q9UN42 357 aaPredicted RBP35.33■■■■□ 3.25
CRNDE-203ENST00000557792 CFAP74Q9C0B2 1584 aa35.33■■■■□ 3.25
CRNDE-203ENST00000557792 RICTORQ6R327 1708 aa35.32■■■■□ 3.25
CRNDE-203ENST00000557792 DENND4BO75064 1496 aaPredicted RBP35.32■■■■□ 3.24
CRNDE-203ENST00000557792 BCORL1Q5H9F3 1711 aa35.27■■■■□ 3.24
CRNDE-203ENST00000557792 ARHGEF40Q8TER5 1519 aa35.27■■■■□ 3.24
CRNDE-203ENST00000557792 PTPRMP28827 1452 aa35.26■■■■□ 3.23
CRNDE-203ENST00000557792 ILDR1Q86SU0 546 aaPredicted RBP35.25■■■■□ 3.23
CRNDE-203ENST00000557792 ARID4BQ4LE39 1312 aaPredicted RBP35.24■■■■□ 3.23
CRNDE-203ENST00000557792 HECW1Q76N89 1606 aa35.23■■■■□ 3.23
CRNDE-203ENST00000557792 CLIP1P30622 1438 aa35.19■■■■□ 3.22
CRNDE-203ENST00000557792 MADDQ8WXG6 1647 aa35.19■■■■□ 3.22
CRNDE-203ENST00000557792 ZMYM4Q5VZL5 1548 aa35.17■■■■□ 3.22
CRNDE-203ENST00000557792 PLCH2O75038 1416 aa35.16■■■■□ 3.22
CRNDE-203ENST00000557792 ZFYVE16Q7Z3T8 1539 aa35.11■■■■□ 3.21
CRNDE-203ENST00000557792 CDK11AQ9UQ88 783 aaPredicted RBP35.1■■■■□ 3.21
CRNDE-203ENST00000557792 YEATS2Q9ULM3 1422 aa35.09■■■■□ 3.21
CRNDE-203ENST00000557792 MYO5CQ9NQX4 1742 aa35.09■■■■□ 3.21
CRNDE-203ENST00000557792 SCAPERQ9BY12 1400 aa35.08■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms