RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 NISCHQ9Y2I1 1504 aa53.51■■■■■ 6.16
CRNDE-203ENST00000557792 ABCC9O60706 1549 aa48.04■■■■■ 5.28
CRNDE-203ENST00000557792 CCDC180Q9P1Z9 1646 aa48.03■■■■■ 5.28
CRNDE-203ENST00000557792 RB1CC1Q8TDY2 1594 aa45.71■■■■■ 4.91
CRNDE-203ENST00000557792 NACADO15069 1562 aa45.4■■■■■ 4.86
CRNDE-203ENST00000557792 DCAF8L2P0C7V8 631 aa45.15■■■■■ 4.82
CRNDE-203ENST00000557792 DNAJC5BQ9UF47 199 aa45.09■■■■■ 4.81
CRNDE-203ENST00000557792 MYO15BQ96JP2 1530 aa44.76■■■■■ 4.76
CRNDE-203ENST00000557792 UNC13AQ9UPW8 1703 aa44.73■■■■■ 4.75
CRNDE-203ENST00000557792 PABPN1Q86U42 306 aaKnown RBP eCLIP44.72■■■■■ 4.75
CRNDE-203ENST00000557792 BICRAQ9NZM4 1560 aa44.4■■■■■ 4.7
CRNDE-203ENST00000557792 ZCCHC6Q5VYS8 1495 aaKnown RBP44.34■■■■■ 4.69
CRNDE-203ENST00000557792 DCAF1Q9Y4B6 1507 aa44.19■■■■■ 4.66
CRNDE-203ENST00000557792 SCRIBQ14160 1630 aa43.77■■■■■ 4.6
CRNDE-203ENST00000557792 SHROOM4Q9ULL8 1493 aa43.76■■■■■ 4.6
CRNDE-203ENST00000557792 CC2D2AQ9P2K1 1620 aa43.4■■■■■ 4.54
CRNDE-203ENST00000557792 EIF4G1Q04637 1599 aaKnown RBP43.3■■■■■ 4.52
CRNDE-203ENST00000557792 CECR2Q9BXF3 1484 aa43.26■■■■■ 4.52
CRNDE-203ENST00000557792 NCAPD3P42695 1498 aa41.91■■■■■ 4.3
CRNDE-203ENST00000557792 ATAD2BQ9ULI0 1458 aa41.79■■■■■ 4.28
CRNDE-203ENST00000557792 SMARCA4P51532 1647 aa41.75■■■■■ 4.27
CRNDE-203ENST00000557792 SMARCA2P51531 1590 aa41.66■■■■■ 4.26
CRNDE-203ENST00000557792 HMGXB3Q12766 1538 aa41.6■■■■■ 4.25
CRNDE-203ENST00000557792 BAZ1AQ9NRL2 1556 aaPredicted RBP41.53■■■■■ 4.24
CRNDE-203ENST00000557792 ERCC6Q03468 1493 aa41.47■■■■■ 4.23
CRNDE-203ENST00000557792 CUX2O14529 1486 aa41.4■■■■■ 4.22
CRNDE-203ENST00000557792 DNAJC5Q9H3Z4 198 aa41.39■■■■■ 4.22
CRNDE-203ENST00000557792 BAZ1BQ9UIG0 1483 aaKnown RBP41.38■■■■■ 4.21
CRNDE-203ENST00000557792 PEG3Q9GZU2 1588 aa41.34■■■■■ 4.21
CRNDE-203ENST00000557792 NESP48681 1621 aa41.27■■■■■ 4.2
CRNDE-203ENST00000557792 MROH2BQ7Z745 1585 aa41.24■■■■■ 4.19
CRNDE-203ENST00000557792 LAMC3Q9Y6N6 1575 aa40.97■■■■■ 4.15
CRNDE-203ENST00000557792 THOC2Q8NI27 1593 aaKnown RBP40.86■■■■■ 4.13
CRNDE-203ENST00000557792 WIZO95785 1651 aa40.75■■■■■ 4.11
CRNDE-203ENST00000557792 KIF21AQ7Z4S6 1674 aa40.75■■■■■ 4.11
CRNDE-203ENST00000557792 PDS5BQ9NTI5 1447 aa40.72■■■■■ 4.11
CRNDE-203ENST00000557792 CADPSQ9ULU8 1353 aa40.63■■■■■ 4.1
CRNDE-203ENST00000557792 RSF1Q96T23 1441 aaPredicted RBP40.44■■■■■ 4.06
CRNDE-203ENST00000557792 MRC2Q9UBG0 1479 aa40.38■■■■■ 4.05
CRNDE-203ENST00000557792 WDR62O43379 1518 aa40.29■■■■■ 4.04
CRNDE-203ENST00000557792 TOP2AP11388 1531 aaKnown RBP40.21■■■■■ 4.03
CRNDE-203ENST00000557792 CEP164Q9UPV0 1460 aa40.21■■■■■ 4.03
CRNDE-203ENST00000557792 FANCD2Q9BXW9 1451 aa40.18■■■■■ 4.02
CRNDE-203ENST00000557792 CFTRP13569 1480 aa40.17■■■■■ 4.02
CRNDE-203ENST00000557792 URB2Q14146 1524 aaKnown RBP39.86■■■■□ 3.97
CRNDE-203ENST00000557792 PRDM2Q13029 1718 aa39.81■■■■□ 3.96
CRNDE-203ENST00000557792 CCDC88BA6NC98 1476 aa39.77■■■■□ 3.96
CRNDE-203ENST00000557792 TRIM41Q8WV44 630 aa39.57■■■■□ 3.93
CRNDE-203ENST00000557792 OSCARQ8IYS5 282 aa39.49■■■■□ 3.91
CRNDE-203ENST00000557792 TOPBP1Q92547 1522 aa39.43■■■■□ 3.9
CRNDE-203ENST00000557792 IFT140Q96RY7 1462 aa39.41■■■■□ 3.9
CRNDE-203ENST00000557792 ZNF608Q9ULD9 1512 aaPredicted RBP39.37■■■■□ 3.89
CRNDE-203ENST00000557792 ABCC8Q09428 1581 aa39.32■■■■□ 3.88
CRNDE-203ENST00000557792 SUPT5HO00267 1087 aaKnown RBP39.3■■■■□ 3.88
CRNDE-203ENST00000557792 DNMBPQ6XZF7 1577 aa39.28■■■■□ 3.88
CRNDE-203ENST00000557792 EIF4G3O43432 1585 aaKnown RBP39.16■■■■□ 3.86
CRNDE-203ENST00000557792 TARBP1Q13395 1621 aaKnown RBP39.09■■■■□ 3.85
CRNDE-203ENST00000557792 RIMBP3CA6NJZ7 1639 aa39.01■■■■□ 3.84
CRNDE-203ENST00000557792 RIMBP3BA6NNM3 1639 aa39.01■■■■□ 3.84
CRNDE-203ENST00000557792 RIMBP3Q9UFD9 1639 aa39.01■■■■□ 3.84
CRNDE-203ENST00000557792 POLA1P09884 1462 aaPredicted RBP39.01■■■■□ 3.84
CRNDE-203ENST00000557792 AQRO60306 1485 aaKnown RBP eCLIP39■■■■□ 3.83
CRNDE-203ENST00000557792 RAD54L2Q9Y4B4 1467 aa38.88■■■■□ 3.81
CRNDE-203ENST00000557792 CHD1O14646 1710 aa38.88■■■■□ 3.81
CRNDE-203ENST00000557792 ARHGEF11O15085 1522 aa38.88■■■■□ 3.81
CRNDE-203ENST00000557792 SOGA1O94964 1423 aa38.83■■■■□ 3.81
CRNDE-203ENST00000557792 FGD5Q6ZNL6 1462 aa38.77■■■■□ 3.8
CRNDE-203ENST00000557792 TDRD9Q8NDG6 1382 aaKnown RBP38.76■■■■□ 3.8
CRNDE-203ENST00000557792 CUX1P39880 1505 aa38.75■■■■□ 3.79
CRNDE-203ENST00000557792 FBLN2P98095 1184 aa38.74■■■■□ 3.79
CRNDE-203ENST00000557792 WDR97A6NE52 1622 aa38.67■■■■□ 3.78
CRNDE-203ENST00000557792 SNAPC4Q5SXM2 1469 aa38.6■■■■□ 3.77
CRNDE-203ENST00000557792 CYB5RLQ6IPT4 315 aa38.58■■■■□ 3.77
CRNDE-203ENST00000557792 ARAP1Q96P48 1450 aa38.5■■■■□ 3.75
CRNDE-203ENST00000557792 MAGI1Q96QZ7 1491 aaPredicted RBP38.5■■■■□ 3.75
CRNDE-203ENST00000557792 GRIN2BQ13224 1484 aa38.49■■■■□ 3.75
CRNDE-203ENST00000557792 CHMP7Q8WUX9 453 aaPredicted RBP38.45■■■■□ 3.75
CRNDE-203ENST00000557792 CLASP1Q7Z460 1538 aa38.43■■■■□ 3.74
CRNDE-203ENST00000557792 SYNJ1O43426 1573 aa38.38■■■■□ 3.73
CRNDE-203ENST00000557792 PBRM1Q86U86 1689 aa38.37■■■■□ 3.73
CRNDE-203ENST00000557792 SYNJ2O15056 1496 aa38.37■■■■□ 3.73
CRNDE-203ENST00000557792 GAPVD1Q14C86 1478 aa38.36■■■■□ 3.73
CRNDE-203ENST00000557792 ABCA10Q8WWZ4 1543 aa38.33■■■■□ 3.73
CRNDE-203ENST00000557792 ABCA5Q8WWZ7 1642 aa38.29■■■■□ 3.72
CRNDE-203ENST00000557792 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
CRNDE-203ENST00000557792 TRHP20396 242 aaPredicted RBP38.15■■■■□ 3.7
CRNDE-203ENST00000557792 BIVM-ERCC5R4GMW8 1640 aa38.12■■■■□ 3.69
CRNDE-203ENST00000557792 TOP2BQ02880 1626 aa38.12■■■■□ 3.69
CRNDE-203ENST00000557792 GRIN2AQ12879 1464 aa38■■■■□ 3.67
CRNDE-203ENST00000557792 ADAMTS12P58397 1594 aa38■■■■□ 3.67
CRNDE-203ENST00000557792 CEP170Q5SW79 1584 aa37.89■■■■□ 3.66
CRNDE-203ENST00000557792 NUP160Q12769 1436 aa37.88■■■■□ 3.66
CRNDE-203ENST00000557792 FHAD1B1AJZ9 1412 aa37.87■■■■□ 3.65
CRNDE-203ENST00000557792 ERICH3Q5RHP9 1530 aa37.85■■■■□ 3.65
CRNDE-203ENST00000557792 ERCC6L2Q5T890 1561 aa37.84■■■■□ 3.65
CRNDE-203ENST00000557792 SHROOM2Q13796 1616 aa37.73■■■■□ 3.63
CRNDE-203ENST00000557792 PRG4Q92954 1404 aaPredicted RBP37.52■■■■□ 3.6
CRNDE-203ENST00000557792 JPH4Q96JJ6 628 aa37.49■■■■□ 3.59
CRNDE-203ENST00000557792 RUSC2Q8N2Y8 1516 aa37.46■■■■□ 3.59
CRNDE-203ENST00000557792 IGF1RP08069 1367 aa37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms