RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
LINC00648-204ENST00000557749 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
LINC00648-204ENST00000557749 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
LINC00648-204ENST00000557749 CHD1O14646 1710 aa19.92■□□□□ 0.78
LINC00648-204ENST00000557749 FBLN2P98095 1184 aa19.91■□□□□ 0.78
LINC00648-204ENST00000557749 MYCNP04198 464 aaPredicted RBP19.89■□□□□ 0.77
LINC00648-204ENST00000557749 SYNJ2O15056 1496 aa19.88■□□□□ 0.77
LINC00648-204ENST00000557749 CHMP7Q8WUX9 453 aaPredicted RBP19.88■□□□□ 0.77
LINC00648-204ENST00000557749 ABCA5Q8WWZ7 1642 aa19.87■□□□□ 0.77
LINC00648-204ENST00000557749 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
LINC00648-204ENST00000557749 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
LINC00648-204ENST00000557749 TRIM41Q8WV44 630 aa19.83■□□□□ 0.77
LINC00648-204ENST00000557749 ARHGEF11O15085 1522 aa19.81■□□□□ 0.76
LINC00648-204ENST00000557749 RIMBP3CA6NJZ7 1639 aa19.81■□□□□ 0.76
LINC00648-204ENST00000557749 RIMBP3BA6NNM3 1639 aa19.81■□□□□ 0.76
LINC00648-204ENST00000557749 RIMBP3Q9UFD9 1639 aa19.81■□□□□ 0.76
LINC00648-204ENST00000557749 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
LINC00648-204ENST00000557749 C1QBPQ07021 282 aaKnown RBP19.75■□□□□ 0.75
LINC00648-204ENST00000557749 CLASP1Q7Z460 1538 aa19.74■□□□□ 0.75
LINC00648-204ENST00000557749 FHAD1B1AJZ9 1412 aa19.72■□□□□ 0.75
LINC00648-204ENST00000557749 ADAMTS12P58397 1594 aa19.71■□□□□ 0.75
LINC00648-204ENST00000557749 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
LINC00648-204ENST00000557749 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
LINC00648-204ENST00000557749 NUP160Q12769 1436 aa19.62■□□□□ 0.73
LINC00648-204ENST00000557749 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
LINC00648-204ENST00000557749 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
LINC00648-204ENST00000557749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
LINC00648-204ENST00000557749 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
LINC00648-204ENST00000557749 SAMD1Q6SPF0 538 aaPredicted RBP19.58■□□□□ 0.72
LINC00648-204ENST00000557749 ATF5Q9Y2D1 282 aaPredicted RBP19.58■□□□□ 0.72
LINC00648-204ENST00000557749 CUL7Q14999 1698 aa19.56■□□□□ 0.72
LINC00648-204ENST00000557749 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
LINC00648-204ENST00000557749 CEP170Q5SW79 1584 aa19.54■□□□□ 0.72
LINC00648-204ENST00000557749 IGF1RP08069 1367 aa19.48■□□□□ 0.71
LINC00648-204ENST00000557749 SHROOM2Q13796 1616 aa19.48■□□□□ 0.71
LINC00648-204ENST00000557749 ATXN8OSP0DMR3 200 aa19.47■□□□□ 0.71
LINC00648-204ENST00000557749 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
LINC00648-204ENST00000557749 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
LINC00648-204ENST00000557749 CARMIL1Q5VZK9 1371 aa19.41■□□□□ 0.7
LINC00648-204ENST00000557749 KIAA0586Q9BVV6 1533 aa19.41■□□□□ 0.7
LINC00648-204ENST00000557749 JPH4Q96JJ6 628 aa19.39■□□□□ 0.69
LINC00648-204ENST00000557749 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
LINC00648-204ENST00000557749 TRHP20396 242 aaPredicted RBP19.33■□□□□ 0.68
LINC00648-204ENST00000557749 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
LINC00648-204ENST00000557749 CAPN15O75808 1086 aa19.3■□□□□ 0.68
LINC00648-204ENST00000557749 APLP2Q06481 763 aa19.3■□□□□ 0.68
LINC00648-204ENST00000557749 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
LINC00648-204ENST00000557749 CARMIL2Q6F5E8 1435 aa19.26■□□□□ 0.67
LINC00648-204ENST00000557749 IQGAP2Q13576 1575 aa19.25■□□□□ 0.67
LINC00648-204ENST00000557749 NPM1P06748 294 aaKnown RBP eCLIP19.21■□□□□ 0.67
LINC00648-204ENST00000557749 EEA1Q15075 1411 aa19.18■□□□□ 0.66
LINC00648-204ENST00000557749 ZNF219Q9P2Y4 722 aaPredicted RBP19.18■□□□□ 0.66
LINC00648-204ENST00000557749 TNIKQ9UKE5 1360 aa19.16■□□□□ 0.66
LINC00648-204ENST00000557749 PTPRGP23470 1445 aa19.16■□□□□ 0.66
LINC00648-204ENST00000557749 PRXQ9BXM0 1461 aa19.14■□□□□ 0.65
LINC00648-204ENST00000557749 UGGT2Q9NYU1 1516 aa19.14■□□□□ 0.65
LINC00648-204ENST00000557749 DSG3P32926 999 aa19.13■□□□□ 0.65
LINC00648-204ENST00000557749 CTTNBP2Q8WZ74 1663 aa19.11■□□□□ 0.65
LINC00648-204ENST00000557749 MAPKBP1O60336 1514 aa19.1■□□□□ 0.65
LINC00648-204ENST00000557749 GOLGA3Q08378 1498 aa19.09■□□□□ 0.65
LINC00648-204ENST00000557749 ADCY10Q96PN6 1610 aa19.08■□□□□ 0.65
LINC00648-204ENST00000557749 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
LINC00648-204ENST00000557749 DISP1Q96F81 1524 aa19.06■□□□□ 0.64
LINC00648-204ENST00000557749 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
LINC00648-204ENST00000557749 KIAA0556O60303 1618 aa19.04■□□□□ 0.64
LINC00648-204ENST00000557749 ABCC2Q92887 1545 aa19.02■□□□□ 0.64
LINC00648-204ENST00000557749 ABCB7O75027 752 aa19.02■□□□□ 0.64
LINC00648-204ENST00000557749 ABCC10Q5T3U5 1492 aa19.02■□□□□ 0.63
LINC00648-204ENST00000557749 UACAQ9BZF9 1416 aa19.01■□□□□ 0.63
LINC00648-204ENST00000557749 POLA2Q14181 598 aa18.99■□□□□ 0.63
LINC00648-204ENST00000557749 KIF13AQ9H1H9 1805 aa18.97■□□□□ 0.63
LINC00648-204ENST00000557749 TTBK1Q5TCY1 1321 aaPredicted RBP18.97■□□□□ 0.63
LINC00648-204ENST00000557749 PLB1Q6P1J6 1458 aa18.96■□□□□ 0.63
LINC00648-204ENST00000557749 FAM69CQ0P6D2 419 aa18.95■□□□□ 0.62
LINC00648-204ENST00000557749 DIP2BQ9P265 1576 aa18.94■□□□□ 0.62
LINC00648-204ENST00000557749 KDM5BQ9UGL1 1544 aa18.92■□□□□ 0.62
LINC00648-204ENST00000557749 KIF21BO75037 1637 aa18.9■□□□□ 0.62
LINC00648-204ENST00000557749 ASXL2Q76L83 1435 aa18.89■□□□□ 0.61
LINC00648-204ENST00000557749 GLI2P10070 1586 aa18.85■□□□□ 0.61
LINC00648-204ENST00000557749 ABCA8O94911 1581 aa18.84■□□□□ 0.61
LINC00648-204ENST00000557749 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
LINC00648-204ENST00000557749 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
LINC00648-204ENST00000557749 EFCAB5A4FU69 1503 aa18.8■□□□□ 0.6
LINC00648-204ENST00000557749 WDR7Q9Y4E6 1490 aa18.79■□□□□ 0.6
LINC00648-204ENST00000557749 EPRSP07814 1512 aaKnown RBP18.77■□□□□ 0.6
LINC00648-204ENST00000557749 TEX14Q8IWB6 1497 aa18.76■□□□□ 0.59
LINC00648-204ENST00000557749 KDM6BO15054 1643 aa18.74■□□□□ 0.59
LINC00648-204ENST00000557749 TSPOAP1O95153 1857 aa18.73■□□□□ 0.59
LINC00648-204ENST00000557749 UBTFP17480 764 aaKnown RBP18.72■□□□□ 0.59
LINC00648-204ENST00000557749 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
LINC00648-204ENST00000557749 RAPGEF6Q8TEU7 1601 aa18.71■□□□□ 0.59
LINC00648-204ENST00000557749 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.59
LINC00648-204ENST00000557749 MKRN4PQ13434 485 aaPredicted RBP18.71■□□□□ 0.59
LINC00648-204ENST00000557749 CFAP43Q8NDM7 1665 aa18.67■□□□□ 0.58
LINC00648-204ENST00000557749 FHOD3Q2V2M9 1422 aa18.66■□□□□ 0.58
LINC00648-204ENST00000557749 ATP10BO94823 1461 aa18.65■□□□□ 0.58
LINC00648-204ENST00000557749 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
LINC00648-204ENST00000557749 FMN1Q68DA7 1419 aa18.64■□□□□ 0.57
LINC00648-204ENST00000557749 MAGI3Q5TCQ9 1506 aa18.64■□□□□ 0.57
LINC00648-204ENST00000557749 PPRC1Q5VV67 1664 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms